RNA–Protein interactions for RNA: ENST00000572004.1

PITPNA-203, Transcript of phosphatidylinositol transfer protein alpha, humanhuman

TSL 4

Gene PITPNA, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNA-203ENST00000572004 PCDHB3Q9Y5E6 796 aa11.69□□□□□ -0.54
PITPNA-203ENST00000572004 URB2Q14146 1524 aaKnown RBP11.69□□□□□ -0.54
PITPNA-203ENST00000572004 TRIM26Q12899 539 aaPredicted RBP11.68□□□□□ -0.54
PITPNA-203ENST00000572004 ADAMTS19Q8TE59 1207 aa11.68□□□□□ -0.54
PITPNA-203ENST00000572004 USB1Q9BQ65 265 aaKnown RBP11.68□□□□□ -0.54
PITPNA-203ENST00000572004 PODXL2Q9NZ53 605 aa11.67□□□□□ -0.54
PITPNA-203ENST00000572004 DESI1Q6ICB0 168 aa11.66□□□□□ -0.54
PITPNA-203ENST00000572004 BRICD5Q6PL45 260 aa11.66□□□□□ -0.54
PITPNA-203ENST00000572004 NR1I2O75469 434 aa11.65□□□□□ -0.54
PITPNA-203ENST00000572004 LYPD8Q6UX82 237 aa11.65□□□□□ -0.54
PITPNA-203ENST00000572004 SCUBE3Q8IX30 993 aa11.65□□□□□ -0.54
PITPNA-203ENST00000572004 FMNL1O95466 1100 aaPredicted RBP11.64□□□□□ -0.55
PITPNA-203ENST00000572004 ABCC8Q09428 1581 aa11.63□□□□□ -0.55
PITPNA-203ENST00000572004 WBP1LQ9NX94 342 aa11.63□□□□□ -0.55
PITPNA-203ENST00000572004 TOPBP1Q92547 1522 aa11.62□□□□□ -0.55
PITPNA-203ENST00000572004 PNMA1Q8ND90 353 aa11.62□□□□□ -0.55
PITPNA-203ENST00000572004 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
PITPNA-203ENST00000572004 THAP11Q96EK4 314 aa11.61□□□□□ -0.55
PITPNA-203ENST00000572004 SALL2Q9Y467 1007 aaPredicted RBP11.61□□□□□ -0.55
PITPNA-203ENST00000572004 JUNDP17535 347 aa11.6□□□□□ -0.55
PITPNA-203ENST00000572004 RFX1P22670 979 aa11.6□□□□□ -0.55
PITPNA-203ENST00000572004 RETREG2Q8NC44 543 aa11.6□□□□□ -0.55
PITPNA-203ENST00000572004 COPS2P61201 443 aa11.59□□□□□ -0.55
PITPNA-203ENST00000572004 ALG2Q9H553 416 aa11.59□□□□□ -0.55
PITPNA-203ENST00000572004 MAP10Q9P2G4 905 aa11.59□□□□□ -0.55
PITPNA-203ENST00000572004 CTHP32929 405 aa11.57□□□□□ -0.56
PITPNA-203ENST00000572004 SEMA3FQ13275 785 aa11.57□□□□□ -0.56
PITPNA-203ENST00000572004 PPP1R15AO75807 674 aaPredicted RBP11.56□□□□□ -0.56
PITPNA-203ENST00000572004 F12P00748 615 aaPredicted RBP11.56□□□□□ -0.56
PITPNA-203ENST00000572004 KCTD12Q96CX2 325 aaKnown RBP11.56□□□□□ -0.56
PITPNA-203ENST00000572004 PPP1R12CQ9BZL4 782 aa11.56□□□□□ -0.56
PITPNA-203ENST00000572004 FKBPLQ9UIM3 349 aa11.56□□□□□ -0.56
PITPNA-203ENST00000572004 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.55□□□□□ -0.56
PITPNA-203ENST00000572004 SOX11P35716 441 aa11.55□□□□□ -0.56
PITPNA-203ENST00000572004 PTPRNQ16849 979 aa11.55□□□□□ -0.56
PITPNA-203ENST00000572004 CFAP70Q5T0N1 1121 aa11.55□□□□□ -0.56
PITPNA-203ENST00000572004 THSD4Q6ZMP0 1018 aa11.55□□□□□ -0.56
PITPNA-203ENST00000572004 SPSB2Q99619 263 aa11.55□□□□□ -0.56
PITPNA-203ENST00000572004 IFT140Q96RY7 1462 aa11.55□□□□□ -0.56
PITPNA-203ENST00000572004 NR1H3Q13133 447 aa11.54□□□□□ -0.56
PITPNA-203ENST00000572004 PBXIP1Q96AQ6 731 aa11.54□□□□□ -0.56
PITPNA-203ENST00000572004 UCN2Q96RP3 112 aa11.54□□□□□ -0.56
PITPNA-203ENST00000572004 KRTAP3-3Q9BYR6 98 aa11.54□□□□□ -0.56
PITPNA-203ENST00000572004 KRTAP3-2Q9BYR7 98 aa11.54□□□□□ -0.56
PITPNA-203ENST00000572004 PRDM9Q9NQV7 894 aa11.54□□□□□ -0.56
PITPNA-203ENST00000572004 ACIN1Q9UKV3 1341 aaKnown RBP11.54□□□□□ -0.56
PITPNA-203ENST00000572004 PALM3A6NDB9 673 aaPredicted RBP11.53□□□□□ -0.56
PITPNA-203ENST00000572004 FBXO45P0C2W1 286 aa11.53□□□□□ -0.56
PITPNA-203ENST00000572004 EIF4G2P78344 907 aaKnown RBP eCLIP11.53□□□□□ -0.56
PITPNA-203ENST00000572004 MSS51Q4VC12 460 aa11.53□□□□□ -0.56
PITPNA-203ENST00000572004 FAM160A2Q8N612 972 aaPredicted RBP11.53□□□□□ -0.56
PITPNA-203ENST00000572004 TRAIPQ9BWF2 469 aa11.53□□□□□ -0.56
PITPNA-203ENST00000572004 CUX1P39880 1505 aa11.53□□□□□ -0.56
PITPNA-203ENST00000572004 POLA1P09884 1462 aaPredicted RBP11.52□□□□□ -0.56
PITPNA-203ENST00000572004 ZBTB7CA1YPR0 619 aa11.52□□□□□ -0.57
PITPNA-203ENST00000572004 ZBBXA8MT70 800 aa11.52□□□□□ -0.57
PITPNA-203ENST00000572004 TLL1O43897 1013 aa11.52□□□□□ -0.57
PITPNA-203ENST00000572004 TFIP11Q9UBB9 837 aaKnown RBP11.52□□□□□ -0.57
PITPNA-203ENST00000572004 CCNYL3P0C7X3 344 aa11.51□□□□□ -0.57
PITPNA-203ENST00000572004 LMOD1P29536 600 aaPredicted RBP11.51□□□□□ -0.57
PITPNA-203ENST00000572004 DXOO77932 396 aaKnown RBP11.5□□□□□ -0.57
PITPNA-203ENST00000572004 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
PITPNA-203ENST00000572004 FGD5Q6ZNL6 1462 aa11.5□□□□□ -0.57
PITPNA-203ENST00000572004 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
PITPNA-203ENST00000572004 ZNF608Q9ULD9 1512 aaPredicted RBP11.49□□□□□ -0.57
PITPNA-203ENST00000572004 ZC3H4Q9UPT8 1303 aaKnown RBP11.48□□□□□ -0.57
PITPNA-203ENST00000572004 CDCA8Q53HL2 280 aa11.47□□□□□ -0.57
PITPNA-203ENST00000572004 TBC1D9Q6ZT07 1266 aa11.47□□□□□ -0.57
PITPNA-203ENST00000572004 AEBP1Q8IUX7 1158 aa11.47□□□□□ -0.57
PITPNA-203ENST00000572004 EIF4G3O43432 1585 aaKnown RBP11.46□□□□□ -0.57
PITPNA-203ENST00000572004 RAD54L2Q9Y4B4 1467 aa11.46□□□□□ -0.57
PITPNA-203ENST00000572004 SOGA1O94964 1423 aa11.46□□□□□ -0.57
PITPNA-203ENST00000572004 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
PITPNA-203ENST00000572004 ADH1BP00325 375 aa11.46□□□□□ -0.57
PITPNA-203ENST00000572004 MMP16P51512 607 aa11.46□□□□□ -0.57
PITPNA-203ENST00000572004 PTPN5P54829 565 aa11.46□□□□□ -0.57
PITPNA-203ENST00000572004 KCNH2Q12809 1159 aa11.46□□□□□ -0.57
PITPNA-203ENST00000572004 MTRQ99707 1265 aa11.46□□□□□ -0.57
PITPNA-203ENST00000572004 EVA1BQ9NVM1 165 aa11.46□□□□□ -0.57
PITPNA-203ENST00000572004 BIVM-ERCC5R4GMW8 1640 aa11.46□□□□□ -0.58
PITPNA-203ENST00000572004 ZPR1O75312 459 aa11.45□□□□□ -0.58
PITPNA-203ENST00000572004 CCDC24Q8N4L8 307 aa11.45□□□□□ -0.58
PITPNA-203ENST00000572004 MAFBQ9Y5Q3 323 aaPredicted RBP11.45□□□□□ -0.58
PITPNA-203ENST00000572004 TOP2BQ02880 1626 aa11.45□□□□□ -0.58
PITPNA-203ENST00000572004 PIK3CDO00329 1044 aa11.44□□□□□ -0.58
PITPNA-203ENST00000572004 SRPK2P78362 688 aaKnown RBP11.44□□□□□ -0.58
PITPNA-203ENST00000572004 SYNJ1O43426 1573 aa11.43□□□□□ -0.58
PITPNA-203ENST00000572004 ATP9BO43861 1147 aa11.43□□□□□ -0.58
PITPNA-203ENST00000572004 CSB-PGBD3P0DP91 1061 aa11.43□□□□□ -0.58
PITPNA-203ENST00000572004 NYAP1Q6ZVC0 841 aa11.43□□□□□ -0.58
PITPNA-203ENST00000572004 ARMC2Q8NEN0 867 aa11.43□□□□□ -0.58
PITPNA-203ENST00000572004 WDR97A6NE52 1622 aa11.42□□□□□ -0.58
PITPNA-203ENST00000572004 POTEMA6NI47 508 aa11.42□□□□□ -0.58
PITPNA-203ENST00000572004 PTK2Q05397 1052 aa11.42□□□□□ -0.58
PITPNA-203ENST00000572004 KCTD17Q8N5Z5 321 aa11.42□□□□□ -0.58
PITPNA-203ENST00000572004 AQRO60306 1485 aaKnown RBP eCLIP11.42□□□□□ -0.58
PITPNA-203ENST00000572004 NBPF14Q5TI25 921 aa11.41□□□□□ -0.58
PITPNA-203ENST00000572004 ZNF516Q92618 1163 aa11.41□□□□□ -0.58
PITPNA-203ENST00000572004 PCDHB9Q9Y5E1 797 aa11.41□□□□□ -0.58
PITPNA-203ENST00000572004 PDXDC2PQ6P474 469 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms