RNA–Protein interactions for RNA: ENST00000572004.1

PITPNA-203, Transcript of phosphatidylinositol transfer protein alpha, humanhuman

TSL 4

Gene PITPNA, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNA-203ENST00000572004 AEBP2Q6ZN18 517 aaPredicted RBP26.76■■□□□ 1.87
PITPNA-203ENST00000572004 CHIC1Q5VXU3 224 aa26.73■■□□□ 1.87
PITPNA-203ENST00000572004 PHF23Q9BUL5 403 aaPredicted RBP23.61■■□□□ 1.37
PITPNA-203ENST00000572004 SENP3Q9H4L4 574 aaPredicted RBP22.56■■□□□ 1.2
PITPNA-203ENST00000572004 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
PITPNA-203ENST00000572004 FOXD1Q16676 465 aa20.89■□□□□ 0.93
PITPNA-203ENST00000572004 ADRA2BP18089 450 aa20.69■□□□□ 0.9
PITPNA-203ENST00000572004 PPP6R1Q9UPN7 881 aa20.63■□□□□ 0.89
PITPNA-203ENST00000572004 PIAS4Q8N2W9 510 aaPredicted RBP19.9■□□□□ 0.78
PITPNA-203ENST00000572004 KCNA4P22459 653 aa19.82■□□□□ 0.76
PITPNA-203ENST00000572004 PPP4R3CPQ6ZMV5 832 aa19.5■□□□□ 0.71
PITPNA-203ENST00000572004 EHMT2Q96KQ7 1210 aa19.29■□□□□ 0.68
PITPNA-203ENST00000572004 NCBP3Q53F19 620 aaKnown RBP19.15■□□□□ 0.66
PITPNA-203ENST00000572004 SLC4A1APQ9BWU0 796 aaKnown RBP19■□□□□ 0.63
PITPNA-203ENST00000572004 MSH5O43196 834 aa18.96■□□□□ 0.63
PITPNA-203ENST00000572004 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
PITPNA-203ENST00000572004 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
PITPNA-203ENST00000572004 CNKSR2Q8WXI2 1034 aa18.77■□□□□ 0.6
PITPNA-203ENST00000572004 CSRNP3Q8WYN3 585 aa18.66■□□□□ 0.58
PITPNA-203ENST00000572004 MAPK8IP2Q13387 824 aaPredicted RBP18.58■□□□□ 0.56
PITPNA-203ENST00000572004 ZBTB22O15209 634 aa18.26■□□□□ 0.51
PITPNA-203ENST00000572004 RNF216Q9NWF9 866 aaPredicted RBP18.22■□□□□ 0.51
PITPNA-203ENST00000572004 DMRT2Q9Y5R5 561 aa18.11■□□□□ 0.49
PITPNA-203ENST00000572004 DNAJC5BQ9UF47 199 aa18.09■□□□□ 0.49
PITPNA-203ENST00000572004 FOXD4L1Q9NU39 408 aa18.02■□□□□ 0.48
PITPNA-203ENST00000572004 HOXD11P31277 338 aaPredicted RBP17.96■□□□□ 0.47
PITPNA-203ENST00000572004 SLC4A2P04920 1241 aa17.68■□□□□ 0.42
PITPNA-203ENST00000572004 MYCNP04198 464 aaPredicted RBP17.43■□□□□ 0.38
PITPNA-203ENST00000572004 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
PITPNA-203ENST00000572004 ATXN8OSP0DMR3 200 aa17.26■□□□□ 0.35
PITPNA-203ENST00000572004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
PITPNA-203ENST00000572004 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
PITPNA-203ENST00000572004 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
PITPNA-203ENST00000572004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.93■□□□□ 0.3
PITPNA-203ENST00000572004 HNRNPUL2Q1KMD3 747 aaKnown RBP16.93■□□□□ 0.3
PITPNA-203ENST00000572004 SAMD1Q6SPF0 538 aaPredicted RBP16.93■□□□□ 0.3
PITPNA-203ENST00000572004 FKBP8Q14318 412 aa16.88■□□□□ 0.29
PITPNA-203ENST00000572004 APLP2Q06481 763 aa16.6■□□□□ 0.25
PITPNA-203ENST00000572004 ZNF219Q9P2Y4 722 aaPredicted RBP16.59■□□□□ 0.25
PITPNA-203ENST00000572004 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.24
PITPNA-203ENST00000572004 AMER1Q5JTC6 1135 aaPredicted RBP16.48■□□□□ 0.23
PITPNA-203ENST00000572004 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
PITPNA-203ENST00000572004 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
PITPNA-203ENST00000572004 RNF39Q9H2S5 420 aa16.33■□□□□ 0.2
PITPNA-203ENST00000572004 CAPN15O75808 1086 aa16.27■□□□□ 0.2
PITPNA-203ENST00000572004 MKRN4PQ13434 485 aaPredicted RBP16.24■□□□□ 0.19
PITPNA-203ENST00000572004 SPDYE4A6NLX3 237 aa16.2■□□□□ 0.18
PITPNA-203ENST00000572004 POLA2Q14181 598 aa16.2■□□□□ 0.18
PITPNA-203ENST00000572004 FBLN2P98095 1184 aa16.18■□□□□ 0.18
PITPNA-203ENST00000572004 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
PITPNA-203ENST00000572004 C1QBPQ07021 282 aaKnown RBP16.14■□□□□ 0.17
PITPNA-203ENST00000572004 ABCB7O75027 752 aa16.05■□□□□ 0.16
PITPNA-203ENST00000572004 FBXO3Q9UK99 471 aa16.02■□□□□ 0.16
PITPNA-203ENST00000572004 SLC24A1O60721 1099 aa15.98■□□□□ 0.15
PITPNA-203ENST00000572004 NISCHQ9Y2I1 1504 aa15.95■□□□□ 0.14
PITPNA-203ENST00000572004 PROM2Q8N271 834 aa15.94■□□□□ 0.14
PITPNA-203ENST00000572004 ZBTB12Q9Y330 459 aaPredicted RBP15.92■□□□□ 0.14
PITPNA-203ENST00000572004 VASPP50552 380 aaPredicted RBP15.83■□□□□ 0.12
PITPNA-203ENST00000572004 DSG3P32926 999 aa15.77■□□□□ 0.12
PITPNA-203ENST00000572004 IFNLR1Q8IU57 520 aaPredicted RBP15.65■□□□□ 0.1
PITPNA-203ENST00000572004 OSCARQ8IYS5 282 aa15.65■□□□□ 0.1
PITPNA-203ENST00000572004 ZNF692Q9BU19 519 aaPredicted RBP15.64■□□□□ 0.09
PITPNA-203ENST00000572004 SPDYE2BA6NHP3 402 aa15.56■□□□□ 0.08
PITPNA-203ENST00000572004 SPDYE6P0CI01 402 aa15.56■□□□□ 0.08
PITPNA-203ENST00000572004 SPDYE2Q495Y8 402 aa15.56■□□□□ 0.08
PITPNA-203ENST00000572004 SSUH2Q9Y2M2 353 aa15.51■□□□□ 0.07
PITPNA-203ENST00000572004 CACNB1Q02641 598 aaPredicted RBP15.48■□□□□ 0.07
PITPNA-203ENST00000572004 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
PITPNA-203ENST00000572004 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
PITPNA-203ENST00000572004 DCAF8L2P0C7V8 631 aa15.44■□□□□ 0.06
PITPNA-203ENST00000572004 STAG3Q9UJ98 1225 aa15.42■□□□□ 0.06
PITPNA-203ENST00000572004 PKD2Q13563 968 aa15.38■□□□□ 0.05
PITPNA-203ENST00000572004 PLCD3Q8N3E9 789 aa15.38■□□□□ 0.05
PITPNA-203ENST00000572004 SPOCK2Q92563 424 aa15.36■□□□□ 0.05
PITPNA-203ENST00000572004 MIER1Q8N108 512 aa15.31■□□□□ 0.04
PITPNA-203ENST00000572004 PLCB2Q00722 1185 aa15.23■□□□□ 0.03
PITPNA-203ENST00000572004 ECM2O94769 699 aaPredicted RBP15.21■□□□□ 0.03
PITPNA-203ENST00000572004 PLEKHG5O94827 1062 aa15.14■□□□□ 0.01
PITPNA-203ENST00000572004 HAP1P54257 671 aaPredicted RBP15.1■□□□□ 0.01
PITPNA-203ENST00000572004 ZBTB47Q9UFB7 747 aaPredicted RBP15.08■□□□□ 0
PITPNA-203ENST00000572004 CIZ1Q9ULV3 898 aaPredicted RBP15.07■□□□□ 0
PITPNA-203ENST00000572004 RGL2O15211 777 aa15.04■□□□□ -0
PITPNA-203ENST00000572004 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
PITPNA-203ENST00000572004 NPM1P06748 294 aaKnown RBP eCLIP14.97□□□□□ -0.01
PITPNA-203ENST00000572004 SPDYE1Q8NFV5 336 aaPredicted RBP14.96□□□□□ -0.01
PITPNA-203ENST00000572004 AKT1S1Q96B36 256 aa14.95□□□□□ -0.02
PITPNA-203ENST00000572004 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.95□□□□□ -0.02
PITPNA-203ENST00000572004 BBXQ8WY36 941 aaPredicted RBP14.94□□□□□ -0.02
PITPNA-203ENST00000572004 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
PITPNA-203ENST00000572004 PAXIP1Q6ZW49 1069 aaPredicted RBP14.88□□□□□ -0.03
PITPNA-203ENST00000572004 CFAP44Q96MT7 982 aa14.86□□□□□ -0.03
PITPNA-203ENST00000572004 PRR29P0C7W0 189 aa14.84□□□□□ -0.03
PITPNA-203ENST00000572004 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
PITPNA-203ENST00000572004 TRIM41Q8WV44 630 aa14.83□□□□□ -0.04
PITPNA-203ENST00000572004 CHGAP10645 457 aaKnown RBP14.82□□□□□ -0.04
PITPNA-203ENST00000572004 NUBP1P53384 320 aa14.81□□□□□ -0.04
PITPNA-203ENST00000572004 GSE1Q14687 1217 aa14.81□□□□□ -0.04
PITPNA-203ENST00000572004 CREBZFQ9NS37 354 aa14.8□□□□□ -0.04
PITPNA-203ENST00000572004 DCAF8Q5TAQ9 597 aa14.78□□□□□ -0.04
PITPNA-203ENST00000572004 VSIG10Q8N0Z9 540 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms