RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 COL14A1Q05707 1796 aaKnown RBP19.71■□□□□ 0.75
RPAIN-209ENST00000571558 EIF3AQ14152 1382 aaKnown RBP19.7■□□□□ 0.74
RPAIN-209ENST00000571558 PLEKHG5O94827 1062 aa19.7■□□□□ 0.74
RPAIN-209ENST00000571558 L3MBTL2Q969R5 705 aa19.7■□□□□ 0.74
RPAIN-209ENST00000571558 DLC1Q96QB1 1528 aa19.7■□□□□ 0.74
RPAIN-209ENST00000571558 R3HDM1Q15032 1099 aaKnown RBP19.69■□□□□ 0.74
RPAIN-209ENST00000571558 PMFBP1Q8TBY8 1022 aa19.69■□□□□ 0.74
RPAIN-209ENST00000571558 POGKQ9P215 609 aa19.69■□□□□ 0.74
RPAIN-209ENST00000571558 PARD3Q8TEW0 1356 aa19.69■□□□□ 0.74
RPAIN-209ENST00000571558 CFAP70Q5T0N1 1121 aa19.68■□□□□ 0.74
RPAIN-209ENST00000571558 FAM196AQ6ZSG2 479 aa19.67■□□□□ 0.74
RPAIN-209ENST00000571558 ADGRB2O60241 1585 aa19.67■□□□□ 0.74
RPAIN-209ENST00000571558 SAFB2Q14151 953 aaKnown RBP eCLIP19.66■□□□□ 0.74
RPAIN-209ENST00000571558 CAMKK2Q96RR4 588 aa19.65■□□□□ 0.74
RPAIN-209ENST00000571558 TRPM3Q9HCF6 1732 aaPredicted RBP19.65■□□□□ 0.74
RPAIN-209ENST00000571558 ALS2Q96Q42 1657 aa19.64■□□□□ 0.73
RPAIN-209ENST00000571558 THSD7AQ9UPZ6 1657 aa19.64■□□□□ 0.73
RPAIN-209ENST00000571558 PRDM11Q9NQV5 511 aa19.64■□□□□ 0.73
RPAIN-209ENST00000571558 EZH2Q15910 746 aaKnown RBP19.63■□□□□ 0.73
RPAIN-209ENST00000571558 FAM182BQ5T319 152 aa19.63■□□□□ 0.73
RPAIN-209ENST00000571558 SPATA31A1Q5TZJ5 1347 aa19.62■□□□□ 0.73
RPAIN-209ENST00000571558 TNS1Q9HBL0 1735 aaKnown RBP19.61■□□□□ 0.73
RPAIN-209ENST00000571558 DCAF11Q8TEB1 546 aa19.6■□□□□ 0.73
RPAIN-209ENST00000571558 TULP4Q9NRJ4 1543 aa19.6■□□□□ 0.73
RPAIN-209ENST00000571558 WASLO00401 505 aaPredicted RBP19.59■□□□□ 0.73
RPAIN-209ENST00000571558 NGDNQ8NEJ9 315 aaKnown RBP19.59■□□□□ 0.73
RPAIN-209ENST00000571558 TRIM37O94972 964 aa19.59■□□□□ 0.73
RPAIN-209ENST00000571558 APBA3O96018 575 aa19.59■□□□□ 0.73
RPAIN-209ENST00000571558 PRR36Q9H6K5 1346 aa19.58■□□□□ 0.72
RPAIN-209ENST00000571558 NBPF8Q3BBV2 869 aa19.58■□□□□ 0.72
RPAIN-209ENST00000571558 NBPF14Q5TI25 921 aa19.58■□□□□ 0.72
RPAIN-209ENST00000571558 STAC3Q96MF2 364 aa19.58■□□□□ 0.72
RPAIN-209ENST00000571558 ADGRB1O14514 1584 aa19.57■□□□□ 0.72
RPAIN-209ENST00000571558 PAK3O75914 559 aaPredicted RBP19.57■□□□□ 0.72
RPAIN-209ENST00000571558 BARGINQ6ZT62 677 aa19.57■□□□□ 0.72
RPAIN-209ENST00000571558 HIRIP3Q9BW71 556 aaPredicted RBP19.57■□□□□ 0.72
RPAIN-209ENST00000571558 C11orf95C9JLR9 678 aaPredicted RBP19.56■□□□□ 0.72
RPAIN-209ENST00000571558 TRAK1Q9UPV9 953 aa19.56■□□□□ 0.72
RPAIN-209ENST00000571558 CRYBG1Q9Y4K1 1723 aa19.56■□□□□ 0.72
RPAIN-209ENST00000571558 KIAA0232Q92628 1395 aa19.56■□□□□ 0.72
RPAIN-209ENST00000571558 YY1P25490 414 aa19.55■□□□□ 0.72
RPAIN-209ENST00000571558 PDE3BQ13370 1112 aa19.55■□□□□ 0.72
RPAIN-209ENST00000571558 MINK1Q8N4C8 1332 aaPredicted RBP19.54■□□□□ 0.72
RPAIN-209ENST00000571558 KDM2AQ9Y2K7 1162 aa19.54■□□□□ 0.72
RPAIN-209ENST00000571558 DCAF8L1A6NGE4 600 aa19.53■□□□□ 0.72
RPAIN-209ENST00000571558 ATP7BP35670 1465 aa19.53■□□□□ 0.72
RPAIN-209ENST00000571558 STRN4Q9NRL3 753 aa19.52■□□□□ 0.72
RPAIN-209ENST00000571558 EVA1CP58658 441 aa19.51■□□□□ 0.71
RPAIN-209ENST00000571558 SPON1Q9HCB6 807 aa19.51■□□□□ 0.71
RPAIN-209ENST00000571558 THRAP3Q9Y2W1 955 aaKnown RBP19.51■□□□□ 0.71
RPAIN-209ENST00000571558 CHRNA2Q15822 529 aa19.5■□□□□ 0.71
RPAIN-209ENST00000571558 NUDT16Q96DE0 195 aaKnown RBP19.49■□□□□ 0.71
RPAIN-209ENST00000571558 RREB1Q92766 1687 aa19.49■□□□□ 0.71
RPAIN-209ENST00000571558 NINLQ9Y2I6 1382 aa19.48■□□□□ 0.71
RPAIN-209ENST00000571558 ZC3H6P61129 1189 aaKnown RBP19.48■□□□□ 0.71
RPAIN-209ENST00000571558 TCP11L2Q8N4U5 519 aa19.48■□□□□ 0.71
RPAIN-209ENST00000571558 USP35Q9P2H5 1018 aa19.48■□□□□ 0.71
RPAIN-209ENST00000571558 PPP1R1BQ9UD71 204 aaPredicted RBP19.48■□□□□ 0.71
RPAIN-209ENST00000571558 SSH2Q76I76 1423 aa19.48■□□□□ 0.71
RPAIN-209ENST00000571558 KCNQ2O43526 872 aa19.47■□□□□ 0.71
RPAIN-209ENST00000571558 ITSN1Q15811 1721 aa19.47■□□□□ 0.71
RPAIN-209ENST00000571558 POLR3AO14802 1390 aaPredicted RBP19.46■□□□□ 0.71
RPAIN-209ENST00000571558 CPDO75976 1380 aa19.46■□□□□ 0.71
RPAIN-209ENST00000571558 TRPM1Q7Z4N2 1603 aa19.46■□□□□ 0.71
RPAIN-209ENST00000571558 PHRF1Q9P1Y6 1649 aaKnown RBP19.45■□□□□ 0.7
RPAIN-209ENST00000571558 NUP188Q5SRE5 1749 aa19.44■□□□□ 0.7
RPAIN-209ENST00000571558 CCDC61Q9Y6R9 512 aa19.44■□□□□ 0.7
RPAIN-209ENST00000571558 KIAA1210Q9ULL0 1709 aa19.43■□□□□ 0.7
RPAIN-209ENST00000571558 PLEKHG3A1L390 1219 aa19.42■□□□□ 0.7
RPAIN-209ENST00000571558 LARP1Q6PKG0 1096 aaKnown RBP19.42■□□□□ 0.7
RPAIN-209ENST00000571558 CAMTA1Q9Y6Y1 1673 aa19.42■□□□□ 0.7
RPAIN-209ENST00000571558 PLSCR1O15162 318 aa19.42■□□□□ 0.7
RPAIN-209ENST00000571558 ABTB2Q8N961 1025 aa19.42■□□□□ 0.7
RPAIN-209ENST00000571558 ACEP12821 1306 aa19.41■□□□□ 0.7
RPAIN-209ENST00000571558 CDK19Q9BWU1 502 aa19.41■□□□□ 0.7
RPAIN-209ENST00000571558 USP19O94966 1318 aa19.41■□□□□ 0.7
RPAIN-209ENST00000571558 NBPF1Q3BBV0 1214 aa19.4■□□□□ 0.7
RPAIN-209ENST00000571558 NUTM2GQ5VZR2 741 aa19.4■□□□□ 0.7
RPAIN-209ENST00000571558 NLRP13Q86W25 1043 aa19.4■□□□□ 0.7
RPAIN-209ENST00000571558 LMO7Q8WWI1 1683 aa19.38■□□□□ 0.69
RPAIN-209ENST00000571558 OVOS2A0A0G2JMS6 1433 aa19.38■□□□□ 0.69
RPAIN-209ENST00000571558 OVOS2A0A0J9YW53 1432 aa19.38■□□□□ 0.69
RPAIN-209ENST00000571558 OVOS2Q6IE36 1432 aa19.38■□□□□ 0.69
RPAIN-209ENST00000571558 BRD4O60885 1362 aaPredicted RBP19.38■□□□□ 0.69
RPAIN-209ENST00000571558 NRKQ7Z2Y5 1582 aa19.38■□□□□ 0.69
RPAIN-209ENST00000571558 ROCK2O75116 1388 aaKnown RBP19.37■□□□□ 0.69
RPAIN-209ENST00000571558 GCP02774 474 aa19.37■□□□□ 0.69
RPAIN-209ENST00000571558 PARP4Q9UKK3 1724 aaKnown RBP19.37■□□□□ 0.69
RPAIN-209ENST00000571558 RGPD3A6NKT7 1758 aaPredicted RBP19.36■□□□□ 0.69
RPAIN-209ENST00000571558 RGPD4Q7Z3J3 1758 aa19.36■□□□□ 0.69
RPAIN-209ENST00000571558 CRB1P82279 1406 aa19.36■□□□□ 0.69
RPAIN-209ENST00000571558 ARHGEF28Q8N1W1 1705 aaKnown RBP19.36■□□□□ 0.69
RPAIN-209ENST00000571558 COL5A2P05997 1499 aaPredicted RBP19.35■□□□□ 0.69
RPAIN-209ENST00000571558 BCL11BQ9C0K0 894 aaPredicted RBP19.34■□□□□ 0.69
RPAIN-209ENST00000571558 TOPAZ1Q8N9V7 1692 aa19.34■□□□□ 0.69
RPAIN-209ENST00000571558 DDB1Q16531 1140 aa19.33■□□□□ 0.68
RPAIN-209ENST00000571558 CARD11Q9BXL7 1154 aa19.33■□□□□ 0.68
RPAIN-209ENST00000571558 BCL9O00512 1426 aa19.32■□□□□ 0.68
RPAIN-209ENST00000571558 CDCA7Q9BWT1 371 aaPredicted RBP19.32■□□□□ 0.68
RPAIN-209ENST00000571558 AATKQ6ZMQ8 1374 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms