RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 UTRNP46939 3433 aa11.07□□□□□ -0.64
SMG6-205ENST00000570659 ADGRB2O60241 1585 aa11.07□□□□□ -0.64
SMG6-205ENST00000570659 CHRNA2Q15822 529 aa11.07□□□□□ -0.64
SMG6-205ENST00000570659 RGL3Q3MIN7 710 aa11.07□□□□□ -0.64
SMG6-205ENST00000570659 NRKQ7Z2Y5 1582 aa11.07□□□□□ -0.64
SMG6-205ENST00000570659 APBA3O96018 575 aa11.06□□□□□ -0.64
SMG6-205ENST00000570659 ANO8Q9HCE9 1232 aaPredicted RBP11.06□□□□□ -0.64
SMG6-205ENST00000570659 SPATA31A1Q5TZJ5 1347 aa11.06□□□□□ -0.64
SMG6-205ENST00000570659 ZNF784Q8NCA9 323 aaPredicted RBP11.05□□□□□ -0.64
SMG6-205ENST00000570659 PHRF1Q9P1Y6 1649 aaKnown RBP11.05□□□□□ -0.64
SMG6-205ENST00000570659 ARHGEF10O15013 1369 aa11.04□□□□□ -0.64
SMG6-205ENST00000570659 PEAK1Q9H792 1746 aa11.04□□□□□ -0.64
SMG6-205ENST00000570659 KIAA0232Q92628 1395 aa11.03□□□□□ -0.64
SMG6-205ENST00000570659 PSME1Q06323 249 aa11.03□□□□□ -0.64
SMG6-205ENST00000570659 CFAP70Q5T0N1 1121 aa11.03□□□□□ -0.64
SMG6-205ENST00000570659 PRAM1Q96QH2 718 aa11.03□□□□□ -0.64
SMG6-205ENST00000570659 HIRIP3Q9BW71 556 aaPredicted RBP11.03□□□□□ -0.64
SMG6-205ENST00000570659 USP35Q9P2H5 1018 aa11.02□□□□□ -0.65
SMG6-205ENST00000570659 ACIN1Q9UKV3 1341 aaKnown RBP11.02□□□□□ -0.65
SMG6-205ENST00000570659 KCNQ2O43526 872 aa11.01□□□□□ -0.65
SMG6-205ENST00000570659 STRN4Q9NRL3 753 aa11.01□□□□□ -0.65
SMG6-205ENST00000570659 SBF2Q86WG5 1849 aa11□□□□□ -0.65
SMG6-205ENST00000570659 ADGRB1O14514 1584 aa11□□□□□ -0.65
SMG6-205ENST00000570659 PTGER2P43116 358 aa11□□□□□ -0.65
SMG6-205ENST00000570659 NUTM2GQ5VZR2 741 aa11□□□□□ -0.65
SMG6-205ENST00000570659 PROM2Q8N271 834 aa11□□□□□ -0.65
SMG6-205ENST00000570659 SLC4A1APQ9BWU0 796 aaKnown RBP11□□□□□ -0.65
SMG6-205ENST00000570659 LMO7Q8WWI1 1683 aa11□□□□□ -0.65
SMG6-205ENST00000570659 NINLQ9Y2I6 1382 aa11□□□□□ -0.65
SMG6-205ENST00000570659 SENP3-EIF4A1A0A087X0R7 540 aa10.99□□□□□ -0.65
SMG6-205ENST00000570659 LARP1Q6PKG0 1096 aaKnown RBP10.99□□□□□ -0.65
SMG6-205ENST00000570659 FAM196AQ6ZSG2 479 aa10.99□□□□□ -0.65
SMG6-205ENST00000570659 C14orf93Q9H972 538 aaKnown RBP10.99□□□□□ -0.65
SMG6-205ENST00000570659 PRDM11Q9NQV5 511 aa10.99□□□□□ -0.65
SMG6-205ENST00000570659 SSH2Q76I76 1423 aa10.99□□□□□ -0.65
SMG6-205ENST00000570659 ANKARQ7Z5J8 1434 aa10.99□□□□□ -0.65
SMG6-205ENST00000570659 ZBTB7AO95365 584 aa10.98□□□□□ -0.65
SMG6-205ENST00000570659 ZC3H6P61129 1189 aaKnown RBP10.98□□□□□ -0.65
SMG6-205ENST00000570659 IFFO2Q5TF58 517 aa10.98□□□□□ -0.65
SMG6-205ENST00000570659 SPON1Q9HCB6 807 aa10.98□□□□□ -0.65
SMG6-205ENST00000570659 PARD3Q8TEW0 1356 aa10.98□□□□□ -0.65
SMG6-205ENST00000570659 CEP350Q5VT06 3117 aa10.97□□□□□ -0.65
SMG6-205ENST00000570659 SIRT1Q96EB6 747 aa10.97□□□□□ -0.65
SMG6-205ENST00000570659 PPP1R1BQ9UD71 204 aaPredicted RBP10.97□□□□□ -0.65
SMG6-205ENST00000570659 MINK1Q8N4C8 1332 aaPredicted RBP10.97□□□□□ -0.65
SMG6-205ENST00000570659 ANKRD30BQ9BXX2 1392 aa10.97□□□□□ -0.65
SMG6-205ENST00000570659 LRRC37A3O60309 1634 aa10.97□□□□□ -0.65
SMG6-205ENST00000570659 PARP4Q9UKK3 1724 aaKnown RBP10.97□□□□□ -0.65
SMG6-205ENST00000570659 DLC1Q96QB1 1528 aa10.96□□□□□ -0.65
SMG6-205ENST00000570659 TULP4Q9NRJ4 1543 aa10.96□□□□□ -0.65
SMG6-205ENST00000570659 ATP7BP35670 1465 aa10.95□□□□□ -0.66
SMG6-205ENST00000570659 C1QTNF8P60827 252 aa10.95□□□□□ -0.66
SMG6-205ENST00000570659 ATF5Q9Y2D1 282 aaPredicted RBP10.95□□□□□ -0.66
SMG6-205ENST00000570659 PAK3O75914 559 aaPredicted RBP10.94□□□□□ -0.66
SMG6-205ENST00000570659 BARGINQ6ZT62 677 aa10.94□□□□□ -0.66
SMG6-205ENST00000570659 SGIP1Q9BQI5 828 aa10.94□□□□□ -0.66
SMG6-205ENST00000570659 RGPD3A6NKT7 1758 aaPredicted RBP10.93□□□□□ -0.66
SMG6-205ENST00000570659 RGPD4Q7Z3J3 1758 aa10.93□□□□□ -0.66
SMG6-205ENST00000570659 FHDC1Q9C0D6 1143 aaPredicted RBP10.93□□□□□ -0.66
SMG6-205ENST00000570659 TRAK1Q9UPV9 953 aa10.93□□□□□ -0.66
SMG6-205ENST00000570659 CHD4Q14839 1912 aa10.93□□□□□ -0.66
SMG6-205ENST00000570659 TOPAZ1Q8N9V7 1692 aa10.92□□□□□ -0.66
SMG6-205ENST00000570659 SYT17Q9BSW7 474 aa10.92□□□□□ -0.66
SMG6-205ENST00000570659 SHANK3Q9BYB0 1731 aa10.92□□□□□ -0.66
SMG6-205ENST00000570659 GPRASP1Q5JY77 1395 aa10.91□□□□□ -0.66
SMG6-205ENST00000570659 DHX57Q6P158 1386 aaKnown RBP10.91□□□□□ -0.66
SMG6-205ENST00000570659 WNK3Q9BYP7 1800 aa10.91□□□□□ -0.66
SMG6-205ENST00000570659 NBPF8Q3BBV2 869 aa10.91□□□□□ -0.66
SMG6-205ENST00000570659 NBPF14Q5TI25 921 aa10.91□□□□□ -0.66
SMG6-205ENST00000570659 ARHGEF28Q8N1W1 1705 aaKnown RBP10.91□□□□□ -0.66
SMG6-205ENST00000570659 COL5A2P05997 1499 aaPredicted RBP10.91□□□□□ -0.66
SMG6-205ENST00000570659 WASLO00401 505 aaPredicted RBP10.9□□□□□ -0.66
SMG6-205ENST00000570659 PDE3BQ13370 1112 aa10.9□□□□□ -0.66
SMG6-205ENST00000570659 TCP11L2Q8N4U5 519 aa10.9□□□□□ -0.66
SMG6-205ENST00000570659 POGKQ9P215 609 aa10.9□□□□□ -0.66
SMG6-205ENST00000570659 MARCH10Q8NA82 808 aaPredicted RBP10.89□□□□□ -0.67
SMG6-205ENST00000570659 NGDNQ8NEJ9 315 aaKnown RBP10.89□□□□□ -0.67
SMG6-205ENST00000570659 MPHOSPH9Q99550 1183 aa10.89□□□□□ -0.67
SMG6-205ENST00000570659 COL18A1P39060 1754 aa10.89□□□□□ -0.67
SMG6-205ENST00000570659 GOLGB1Q14789 3259 aaKnown RBP10.89□□□□□ -0.67
SMG6-205ENST00000570659 USP19O94966 1318 aa10.88□□□□□ -0.67
SMG6-205ENST00000570659 PAPPAQ13219 1627 aa10.88□□□□□ -0.67
SMG6-205ENST00000570659 ITSN1Q15811 1721 aa10.87□□□□□ -0.67
SMG6-205ENST00000570659 NUDT16Q96DE0 195 aaKnown RBP10.87□□□□□ -0.67
SMG6-205ENST00000570659 RGPD5Q99666 1765 aa10.87□□□□□ -0.67
SMG6-205ENST00000570659 OVOS2A0A0G2JMS6 1433 aa10.86□□□□□ -0.67
SMG6-205ENST00000570659 OVOS2A0A0J9YW53 1432 aa10.86□□□□□ -0.67
SMG6-205ENST00000570659 OVOS2Q6IE36 1432 aa10.86□□□□□ -0.67
SMG6-205ENST00000570659 PLSCR1O15162 318 aa10.86□□□□□ -0.67
SMG6-205ENST00000570659 POLR3AO14802 1390 aaPredicted RBP10.86□□□□□ -0.67
SMG6-205ENST00000570659 CPDO75976 1380 aa10.86□□□□□ -0.67
SMG6-205ENST00000570659 ACEP12821 1306 aa10.85□□□□□ -0.67
SMG6-205ENST00000570659 EVA1CP58658 441 aa10.85□□□□□ -0.67
SMG6-205ENST00000570659 AXIN2Q9Y2T1 843 aa10.85□□□□□ -0.67
SMG6-205ENST00000570659 TXNRD1Q16881 649 aa10.84□□□□□ -0.67
SMG6-205ENST00000570659 ZNF827Q17R98 1081 aa10.84□□□□□ -0.67
SMG6-205ENST00000570659 BCL11BQ9C0K0 894 aaPredicted RBP10.84□□□□□ -0.67
SMG6-205ENST00000570659 AKAP12Q02952 1782 aa10.84□□□□□ -0.67
SMG6-205ENST00000570659 CRB1P82279 1406 aa10.84□□□□□ -0.67
SMG6-205ENST00000570659 SLC15A2Q16348 729 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms