RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 C9orf84Q5VXU9 1444 aa9.93□□□□□ -0.82
UBFD1-209ENST00000569919 RANGAP1P46060 587 aaPredicted RBP9.93□□□□□ -0.82
UBFD1-209ENST00000569919 CLK2P49760 499 aaKnown RBP9.93□□□□□ -0.82
UBFD1-209ENST00000569919 SAMD9Q5K651 1589 aa9.92□□□□□ -0.82
UBFD1-209ENST00000569919 IQSEC2Q5JU85 1478 aa9.92□□□□□ -0.82
UBFD1-209ENST00000569919 FLIIQ13045 1269 aa9.92□□□□□ -0.82
UBFD1-209ENST00000569919 NUTM1Q86Y26 1132 aa9.92□□□□□ -0.82
UBFD1-209ENST00000569919 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.92□□□□□ -0.82
UBFD1-209ENST00000569919 ZMYND15Q9H091 742 aa9.92□□□□□ -0.82
UBFD1-209ENST00000569919 MYT1LQ9UL68 1186 aa9.92□□□□□ -0.82
UBFD1-209ENST00000569919 VPS9D1Q9Y2B5 631 aa9.92□□□□□ -0.82
UBFD1-209ENST00000569919 SIGLEC1Q9BZZ2 1709 aa9.91□□□□□ -0.82
UBFD1-209ENST00000569919 RDH13Q8NBN7 331 aa9.91□□□□□ -0.82
UBFD1-209ENST00000569919 SWT1Q5T5J6 900 aaKnown RBP9.9□□□□□ -0.82
UBFD1-209ENST00000569919 LIMD1Q9UGP4 676 aa9.9□□□□□ -0.82
UBFD1-209ENST00000569919 CDK11AQ9UQ88 783 aaPredicted RBP9.9□□□□□ -0.82
UBFD1-209ENST00000569919 POTEB3A0JP26 581 aa9.89□□□□□ -0.83
UBFD1-209ENST00000569919 UBAP1LF5GYI3 381 aa9.89□□□□□ -0.83
UBFD1-209ENST00000569919 POTEBQ6S5H4 581 aa9.89□□□□□ -0.83
UBFD1-209ENST00000569919 RIC3Q7Z5B4 369 aa9.89□□□□□ -0.83
UBFD1-209ENST00000569919 AFAP1Q8N556 730 aa9.89□□□□□ -0.83
UBFD1-209ENST00000569919 HS3ST6Q96QI5 342 aa9.89□□□□□ -0.83
UBFD1-209ENST00000569919 TRAPPC8Q9Y2L5 1435 aa9.89□□□□□ -0.83
UBFD1-209ENST00000569919 LTBP4Q8N2S1 1624 aa9.89□□□□□ -0.83
UBFD1-209ENST00000569919 HDGFP51858 240 aaKnown RBP9.88□□□□□ -0.83
UBFD1-209ENST00000569919 FAM98CQ17RN3 349 aaKnown RBP9.88□□□□□ -0.83
UBFD1-209ENST00000569919 RSPH4AQ5TD94 716 aa9.88□□□□□ -0.83
UBFD1-209ENST00000569919 MOXD2PA6NHM9 499 aa9.87□□□□□ -0.83
UBFD1-209ENST00000569919 SPTLC1O15269 473 aa9.87□□□□□ -0.83
UBFD1-209ENST00000569919 SLC10A3P09131 477 aa9.87□□□□□ -0.83
UBFD1-209ENST00000569919 ZNF518AQ6AHZ1 1483 aa9.86□□□□□ -0.83
UBFD1-209ENST00000569919 KDM4AO75164 1064 aa9.86□□□□□ -0.83
UBFD1-209ENST00000569919 GCGRP47871 477 aa9.86□□□□□ -0.83
UBFD1-209ENST00000569919 RSBN1LQ6PCB5 846 aaPredicted RBP9.86□□□□□ -0.83
UBFD1-209ENST00000569919 NDUFV2P19404 249 aa9.85□□□□□ -0.83
UBFD1-209ENST00000569919 LAPTM4BQ86VI4 370 aa9.85□□□□□ -0.83
UBFD1-209ENST00000569919 NBPF3Q9H094 633 aa9.85□□□□□ -0.83
UBFD1-209ENST00000569919 NCOA1Q15788 1441 aa9.84□□□□□ -0.83
UBFD1-209ENST00000569919 BHMG1C9JSJ3 638 aaPredicted RBP9.84□□□□□ -0.83
UBFD1-209ENST00000569919 TK2O00142 265 aa9.84□□□□□ -0.83
UBFD1-209ENST00000569919 TUSC1Q2TAM9 212 aa9.84□□□□□ -0.83
UBFD1-209ENST00000569919 FBXO31Q5XUX0 539 aaPredicted RBP9.84□□□□□ -0.83
UBFD1-209ENST00000569919 SAMD7Q7Z3H4 446 aa9.84□□□□□ -0.83
UBFD1-209ENST00000569919 RFC5P40937 340 aa9.83□□□□□ -0.84
UBFD1-209ENST00000569919 CSPP1Q1MSJ5 1256 aa9.83□□□□□ -0.84
UBFD1-209ENST00000569919 LCE2DQ5TA82 110 aaPredicted RBP9.83□□□□□ -0.84
UBFD1-209ENST00000569919 CNTLNQ9NXG0 1405 aa9.82□□□□□ -0.84
UBFD1-209ENST00000569919 GJA5P36382 358 aa9.82□□□□□ -0.84
UBFD1-209ENST00000569919 SLC4A3P48751 1232 aa9.82□□□□□ -0.84
UBFD1-209ENST00000569919 USP46P62068 366 aa9.82□□□□□ -0.84
UBFD1-209ENST00000569919 MCM6Q14566 821 aa9.82□□□□□ -0.84
UBFD1-209ENST00000569919 PPP2R2DQ66LE6 453 aa9.82□□□□□ -0.84
UBFD1-209ENST00000569919 SLF2Q8IX21 1173 aa9.82□□□□□ -0.84
UBFD1-209ENST00000569919 PCDHB15Q9Y5E8 787 aa9.82□□□□□ -0.84
UBFD1-209ENST00000569919 ZNF335Q9H4Z2 1342 aaPredicted RBP9.82□□□□□ -0.84
UBFD1-209ENST00000569919 MLH3Q9UHC1 1453 aa9.81□□□□□ -0.84
UBFD1-209ENST00000569919 TOM1O60784 492 aa9.81□□□□□ -0.84
UBFD1-209ENST00000569919 LSM11P83369 360 aaKnown RBP eCLIP9.81□□□□□ -0.84
UBFD1-209ENST00000569919 ZFRQ96KR1 1074 aaKnown RBP9.81□□□□□ -0.84
UBFD1-209ENST00000569919 AGLP35573 1532 aa9.81□□□□□ -0.84
UBFD1-209ENST00000569919 C3P01024 1663 aa9.8□□□□□ -0.84
UBFD1-209ENST00000569919 REREQ9P2R6 1566 aa9.8□□□□□ -0.84
UBFD1-209ENST00000569919 HOXA2O43364 376 aa9.8□□□□□ -0.84
UBFD1-209ENST00000569919 QPCTQ16769 361 aa9.8□□□□□ -0.84
UBFD1-209ENST00000569919 ADGRD1Q6QNK2 874 aa9.8□□□□□ -0.84
UBFD1-209ENST00000569919 MRPL50Q8N5N7 158 aaKnown RBP9.8□□□□□ -0.84
UBFD1-209ENST00000569919 CDK13Q14004 1512 aaKnown RBP9.8□□□□□ -0.84
UBFD1-209ENST00000569919 NPATQ14207 1427 aa9.8□□□□□ -0.84
UBFD1-209ENST00000569919 KDM5CP41229 1560 aa9.8□□□□□ -0.84
UBFD1-209ENST00000569919 ZMYM3Q14202 1370 aa9.79□□□□□ -0.84
UBFD1-209ENST00000569919 LILRB3O75022 631 aa9.79□□□□□ -0.84
UBFD1-209ENST00000569919 UBTFP17480 764 aaKnown RBP9.79□□□□□ -0.84
UBFD1-209ENST00000569919 EEA1Q15075 1411 aa9.79□□□□□ -0.84
UBFD1-209ENST00000569919 MYO5CQ9NQX4 1742 aa9.79□□□□□ -0.84
UBFD1-209ENST00000569919 CAMSAP1Q5T5Y3 1602 aa9.78□□□□□ -0.84
UBFD1-209ENST00000569919 ARHGAP5Q13017 1502 aa9.78□□□□□ -0.84
UBFD1-209ENST00000569919 RNF40O75150 1001 aa9.78□□□□□ -0.84
UBFD1-209ENST00000569919 FDX1P10109 184 aa9.78□□□□□ -0.84
UBFD1-209ENST00000569919 HSPA1LP34931 641 aa9.78□□□□□ -0.84
UBFD1-209ENST00000569919 TMEM259Q4ZIN3 620 aa9.78□□□□□ -0.84
UBFD1-209ENST00000569919 BANK1Q8NDB2 785 aa9.78□□□□□ -0.84
UBFD1-209ENST00000569919 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
UBFD1-209ENST00000569919 DIP2CQ9Y2E4 1556 aa9.78□□□□□ -0.84
UBFD1-209ENST00000569919 CLIP1P30622 1438 aa9.77□□□□□ -0.85
UBFD1-209ENST00000569919 FMN1Q68DA7 1419 aa9.77□□□□□ -0.85
UBFD1-209ENST00000569919 CFHP08603 1231 aa9.77□□□□□ -0.85
UBFD1-209ENST00000569919 PIP4K2BP78356 416 aa9.77□□□□□ -0.85
UBFD1-209ENST00000569919 HLA-CQ95604 372 aa9.77□□□□□ -0.85
UBFD1-209ENST00000569919 TROQ12816 1431 aaPredicted RBP9.76□□□□□ -0.85
UBFD1-209ENST00000569919 SPDYE5A6NIY4 337 aa9.76□□□□□ -0.85
UBFD1-209ENST00000569919 NUTM2BA6NNL0 878 aaPredicted RBP9.76□□□□□ -0.85
UBFD1-209ENST00000569919 NUTM2EB1AL46 878 aaPredicted RBP9.76□□□□□ -0.85
UBFD1-209ENST00000569919 HRO43593 1189 aa9.76□□□□□ -0.85
UBFD1-209ENST00000569919 GUCA2AQ02747 115 aa9.76□□□□□ -0.85
UBFD1-209ENST00000569919 RTL5Q5HYW3 569 aaPredicted RBP9.76□□□□□ -0.85
UBFD1-209ENST00000569919 NUTM2DQ5VT03 806 aaPredicted RBP9.76□□□□□ -0.85
UBFD1-209ENST00000569919 NUTM2AQ8IVF1 878 aaPredicted RBP9.76□□□□□ -0.85
UBFD1-209ENST00000569919 CABLES1Q8TDN4 633 aa9.76□□□□□ -0.85
UBFD1-209ENST00000569919 SNRKQ9NRH2 765 aa9.76□□□□□ -0.85
UBFD1-209ENST00000569919 PCDHGC3Q9UN70 934 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms