RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 RGPD1P0DJD0 1748 aa13.82□□□□□ -0.2
TCF4-243ENST00000569357 FXR2P51116 673 aaKnown RBP eCLIP13.82□□□□□ -0.2
TCF4-243ENST00000569357 SPON1Q9HCB6 807 aa13.82□□□□□ -0.2
TCF4-243ENST00000569357 RPGRIP1LQ68CZ1 1315 aa13.82□□□□□ -0.2
TCF4-243ENST00000569357 PLEKHH1Q9ULM0 1364 aa13.82□□□□□ -0.2
TCF4-243ENST00000569357 IFFO2Q5TF58 517 aa13.81□□□□□ -0.2
TCF4-243ENST00000569357 NWD2Q9ULI1 1742 aa13.81□□□□□ -0.2
TCF4-243ENST00000569357 DISP2A7MBM2 1401 aa13.81□□□□□ -0.2
TCF4-243ENST00000569357 TMEM132EQ6IEE7 984 aa13.8□□□□□ -0.2
TCF4-243ENST00000569357 FAM196AQ6ZSG2 479 aa13.8□□□□□ -0.2
TCF4-243ENST00000569357 KIF1BO60333 1816 aa13.8□□□□□ -0.2
TCF4-243ENST00000569357 ARHGEF10O15013 1369 aa13.8□□□□□ -0.2
TCF4-243ENST00000569357 KCNQ2O43526 872 aa13.79□□□□□ -0.2
TCF4-243ENST00000569357 EVX2Q03828 476 aa13.79□□□□□ -0.2
TCF4-243ENST00000569357 SPATA31A5Q5VU36 1347 aa13.79□□□□□ -0.2
TCF4-243ENST00000569357 SPATA31A7Q8IWB4 1347 aa13.79□□□□□ -0.2
TCF4-243ENST00000569357 ZNF784Q8NCA9 323 aaPredicted RBP13.78□□□□□ -0.2
TCF4-243ENST00000569357 PMFBP1Q8TBY8 1022 aa13.78□□□□□ -0.2
TCF4-243ENST00000569357 SBNO1A3KN83 1393 aa13.78□□□□□ -0.2
TCF4-243ENST00000569357 KIF1AQ12756 1690 aa13.78□□□□□ -0.2
TCF4-243ENST00000569357 ADGRB2O60241 1585 aa13.77□□□□□ -0.21
TCF4-243ENST00000569357 PARD3Q8TEW0 1356 aa13.76□□□□□ -0.21
TCF4-243ENST00000569357 NINLQ9Y2I6 1382 aa13.76□□□□□ -0.21
TCF4-243ENST00000569357 ADGRF5Q8IZF2 1346 aa13.76□□□□□ -0.21
TCF4-243ENST00000569357 SAFB2Q14151 953 aaKnown RBP eCLIP13.75□□□□□ -0.21
TCF4-243ENST00000569357 RGL3Q3MIN7 710 aa13.75□□□□□ -0.21
TCF4-243ENST00000569357 PRDM11Q9NQV5 511 aa13.75□□□□□ -0.21
TCF4-243ENST00000569357 STRN4Q9NRL3 753 aa13.75□□□□□ -0.21
TCF4-243ENST00000569357 USP35Q9P2H5 1018 aa13.75□□□□□ -0.21
TCF4-243ENST00000569357 TNS1Q9HBL0 1735 aaKnown RBP13.75□□□□□ -0.21
TCF4-243ENST00000569357 FMN2Q9NZ56 1722 aa13.75□□□□□ -0.21
TCF4-243ENST00000569357 PDE3BQ13370 1112 aa13.74□□□□□ -0.21
TCF4-243ENST00000569357 TECPR2O15040 1411 aa13.73□□□□□ -0.21
TCF4-243ENST00000569357 NRAPQ86VF7 1730 aa13.73□□□□□ -0.21
TCF4-243ENST00000569357 ABCC11Q96J66 1382 aa13.73□□□□□ -0.21
TCF4-243ENST00000569357 C1QTNF8P60827 252 aa13.73□□□□□ -0.21
TCF4-243ENST00000569357 ABCA3Q99758 1704 aa13.72□□□□□ -0.21
TCF4-243ENST00000569357 SPATA31A1Q5TZJ5 1347 aa13.71□□□□□ -0.21
TCF4-243ENST00000569357 NRXN1Q9ULB1 1477 aa13.71□□□□□ -0.21
TCF4-243ENST00000569357 CAMTA1Q9Y6Y1 1673 aa13.71□□□□□ -0.21
TCF4-243ENST00000569357 PAK3O75914 559 aaPredicted RBP13.7□□□□□ -0.22
TCF4-243ENST00000569357 CHRNA2Q15822 529 aa13.7□□□□□ -0.22
TCF4-243ENST00000569357 COL14A1Q05707 1796 aaKnown RBP13.7□□□□□ -0.22
TCF4-243ENST00000569357 THSD7AQ9UPZ6 1657 aa13.69□□□□□ -0.22
TCF4-243ENST00000569357 PPLO60437 1756 aa13.69□□□□□ -0.22
TCF4-243ENST00000569357 SLC4A1APQ9BWU0 796 aaKnown RBP13.69□□□□□ -0.22
TCF4-243ENST00000569357 FOXD4L1Q9NU39 408 aa13.69□□□□□ -0.22
TCF4-243ENST00000569357 YTHDC2Q9H6S0 1430 aaKnown RBP13.69□□□□□ -0.22
TCF4-243ENST00000569357 RRBP1Q9P2E9 1410 aaKnown RBP13.69□□□□□ -0.22
TCF4-243ENST00000569357 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
TCF4-243ENST00000569357 RGPD8O14715 1765 aaPredicted RBP13.68□□□□□ -0.22
TCF4-243ENST00000569357 EVA1CP58658 441 aa13.68□□□□□ -0.22
TCF4-243ENST00000569357 ZBTB7AO95365 584 aa13.67□□□□□ -0.22
TCF4-243ENST00000569357 PRAM1Q96QH2 718 aa13.67□□□□□ -0.22
TCF4-243ENST00000569357 NUP188Q5SRE5 1749 aa13.67□□□□□ -0.22
TCF4-243ENST00000569357 PPARGC1BQ86YN6 1023 aaKnown RBP13.66□□□□□ -0.22
TCF4-243ENST00000569357 POGKQ9P215 609 aa13.66□□□□□ -0.22
TCF4-243ENST00000569357 ZC3H6P61129 1189 aaKnown RBP13.65□□□□□ -0.22
TCF4-243ENST00000569357 NGDNQ8NEJ9 315 aaKnown RBP13.65□□□□□ -0.22
TCF4-243ENST00000569357 SIRT1Q96EB6 747 aa13.65□□□□□ -0.22
TCF4-243ENST00000569357 KIAA0232Q92628 1395 aa13.65□□□□□ -0.22
TCF4-243ENST00000569357 RREB1Q92766 1687 aa13.65□□□□□ -0.22
TCF4-243ENST00000569357 IFT172Q9UG01 1749 aa13.64□□□□□ -0.23
TCF4-243ENST00000569357 ANKRD30BQ9BXX2 1392 aa13.64□□□□□ -0.23
TCF4-243ENST00000569357 HIRIP3Q9BW71 556 aaPredicted RBP13.64□□□□□ -0.23
TCF4-243ENST00000569357 PDGFDQ9GZP0 370 aaPredicted RBP13.64□□□□□ -0.23
TCF4-243ENST00000569357 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
TCF4-243ENST00000569357 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
TCF4-243ENST00000569357 FHDC1Q9C0D6 1143 aaPredicted RBP13.63□□□□□ -0.23
TCF4-243ENST00000569357 BCL11BQ9C0K0 894 aaPredicted RBP13.63□□□□□ -0.23
TCF4-243ENST00000569357 KNDC1Q76NI1 1749 aa13.63□□□□□ -0.23
TCF4-243ENST00000569357 DHX57Q6P158 1386 aaKnown RBP13.62□□□□□ -0.23
TCF4-243ENST00000569357 NUTM2GQ5VZR2 741 aa13.62□□□□□ -0.23
TCF4-243ENST00000569357 SYT17Q9BSW7 474 aa13.62□□□□□ -0.23
TCF4-243ENST00000569357 ANO8Q9HCE9 1232 aaPredicted RBP13.62□□□□□ -0.23
TCF4-243ENST00000569357 NRKQ7Z2Y5 1582 aa13.62□□□□□ -0.23
TCF4-243ENST00000569357 GIGYF1O75420 1035 aaPredicted RBP13.61□□□□□ -0.23
TCF4-243ENST00000569357 CFAP70Q5T0N1 1121 aa13.61□□□□□ -0.23
TCF4-243ENST00000569357 LARP1Q6PKG0 1096 aaKnown RBP13.61□□□□□ -0.23
TCF4-243ENST00000569357 TCP11L2Q8N4U5 519 aa13.61□□□□□ -0.23
TCF4-243ENST00000569357 PIK3C2GO75747 1445 aa13.61□□□□□ -0.23
TCF4-243ENST00000569357 ANKARQ7Z5J8 1434 aa13.61□□□□□ -0.23
TCF4-243ENST00000569357 PTGER2P43116 358 aa13.6□□□□□ -0.23
TCF4-243ENST00000569357 C14orf93Q9H972 538 aaKnown RBP13.6□□□□□ -0.23
TCF4-243ENST00000569357 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
TCF4-243ENST00000569357 MINK1Q8N4C8 1332 aaPredicted RBP13.59□□□□□ -0.23
TCF4-243ENST00000569357 PRR36Q9H6K5 1346 aa13.59□□□□□ -0.23
TCF4-243ENST00000569357 SSH2Q76I76 1423 aa13.58□□□□□ -0.24
TCF4-243ENST00000569357 ALS2Q96Q42 1657 aa13.58□□□□□ -0.24
TCF4-243ENST00000569357 PLSCR1O15162 318 aa13.57□□□□□ -0.24
TCF4-243ENST00000569357 MYOM1P52179 1685 aa13.56□□□□□ -0.24
TCF4-243ENST00000569357 SPATA31E1Q6ZUB1 1445 aa13.56□□□□□ -0.24
TCF4-243ENST00000569357 C11orf95C9JLR9 678 aaPredicted RBP13.56□□□□□ -0.24
TCF4-243ENST00000569357 GPR162Q16538 588 aa13.56□□□□□ -0.24
TCF4-243ENST00000569357 STK32BQ9NY57 414 aa13.56□□□□□ -0.24
TCF4-243ENST00000569357 TRAK1Q9UPV9 953 aa13.56□□□□□ -0.24
TCF4-243ENST00000569357 ZBTB7CA1YPR0 619 aa13.55□□□□□ -0.24
TCF4-243ENST00000569357 EIF3AQ14152 1382 aaKnown RBP13.55□□□□□ -0.24
TCF4-243ENST00000569357 PTF1AQ7RTS3 328 aa13.54□□□□□ -0.24
TCF4-243ENST00000569357 PELP1Q8IZL8 1130 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms