RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 BTG4Q9NY30 223 aa9.32□□□□□ -0.92
PTPN9-205ENST00000568108 TRAK1Q9UPV9 953 aa9.32□□□□□ -0.92
PTPN9-205ENST00000568108 MINK1Q8N4C8 1332 aaPredicted RBP9.31□□□□□ -0.92
PTPN9-205ENST00000568108 ANKARQ7Z5J8 1434 aa9.31□□□□□ -0.92
PTPN9-205ENST00000568108 BRWD3Q6RI45 1802 aa9.31□□□□□ -0.92
PTPN9-205ENST00000568108 BAG6P46379 1132 aa9.31□□□□□ -0.92
PTPN9-205ENST00000568108 NGDNQ8NEJ9 315 aaKnown RBP9.31□□□□□ -0.92
PTPN9-205ENST00000568108 KDM2AQ9Y2K7 1162 aa9.31□□□□□ -0.92
PTPN9-205ENST00000568108 GPRASP1Q5JY77 1395 aa9.31□□□□□ -0.92
PTPN9-205ENST00000568108 PAK3O75914 559 aaPredicted RBP9.3□□□□□ -0.92
PTPN9-205ENST00000568108 PRR36Q9H6K5 1346 aa9.3□□□□□ -0.92
PTPN9-205ENST00000568108 NWD2Q9ULI1 1742 aa9.29□□□□□ -0.92
PTPN9-205ENST00000568108 PSDA5PKW4 1024 aaPredicted RBP9.29□□□□□ -0.92
PTPN9-205ENST00000568108 WASLO00401 505 aaPredicted RBP9.29□□□□□ -0.92
PTPN9-205ENST00000568108 DCAF11Q8TEB1 546 aa9.29□□□□□ -0.92
PTPN9-205ENST00000568108 DLC1Q96QB1 1528 aa9.29□□□□□ -0.92
PTPN9-205ENST00000568108 PLCH1Q4KWH8 1693 aa9.29□□□□□ -0.92
PTPN9-205ENST00000568108 EIF3AQ14152 1382 aaKnown RBP9.28□□□□□ -0.92
PTPN9-205ENST00000568108 EN1Q05925 392 aaPredicted RBP9.28□□□□□ -0.92
PTPN9-205ENST00000568108 FAM182BQ5T319 152 aa9.28□□□□□ -0.92
PTPN9-205ENST00000568108 RTN4Q9NQC3 1192 aaKnown RBP9.28□□□□□ -0.92
PTPN9-205ENST00000568108 PRDM11Q9NQV5 511 aa9.28□□□□□ -0.92
PTPN9-205ENST00000568108 SPATA31A5Q5VU36 1347 aa9.28□□□□□ -0.92
PTPN9-205ENST00000568108 SPATA31A7Q8IWB4 1347 aa9.28□□□□□ -0.92
PTPN9-205ENST00000568108 STAC3Q96MF2 364 aa9.27□□□□□ -0.93
PTPN9-205ENST00000568108 RAB3GAP2Q9H2M9 1393 aa9.26□□□□□ -0.93
PTPN9-205ENST00000568108 ABCA3Q99758 1704 aa9.26□□□□□ -0.93
PTPN9-205ENST00000568108 ADGRB1O14514 1584 aa9.26□□□□□ -0.93
PTPN9-205ENST00000568108 NUDT16Q96DE0 195 aaKnown RBP9.26□□□□□ -0.93
PTPN9-205ENST00000568108 ADGRB2O60241 1585 aa9.25□□□□□ -0.93
PTPN9-205ENST00000568108 ZC3H6P61129 1189 aaKnown RBP9.25□□□□□ -0.93
PTPN9-205ENST00000568108 R3HDM1Q15032 1099 aaKnown RBP9.25□□□□□ -0.93
PTPN9-205ENST00000568108 CHRNA2Q15822 529 aa9.25□□□□□ -0.93
PTPN9-205ENST00000568108 TULP4Q9NRJ4 1543 aa9.25□□□□□ -0.93
PTPN9-205ENST00000568108 TRPM3Q9HCF6 1732 aaPredicted RBP9.25□□□□□ -0.93
PTPN9-205ENST00000568108 COL14A1Q05707 1796 aaKnown RBP9.24□□□□□ -0.93
PTPN9-205ENST00000568108 SLC24A1O60721 1099 aa9.24□□□□□ -0.93
PTPN9-205ENST00000568108 EVA1CP58658 441 aa9.24□□□□□ -0.93
PTPN9-205ENST00000568108 NUTM2GQ5VZR2 741 aa9.24□□□□□ -0.93
PTPN9-205ENST00000568108 FAM196AQ6ZSG2 479 aa9.24□□□□□ -0.93
PTPN9-205ENST00000568108 STRN4Q9NRL3 753 aa9.24□□□□□ -0.93
PTPN9-205ENST00000568108 NRAPQ86VF7 1730 aa9.24□□□□□ -0.93
PTPN9-205ENST00000568108 SPATA31A1Q5TZJ5 1347 aa9.24□□□□□ -0.93
PTPN9-205ENST00000568108 KIAA0232Q92628 1395 aa9.24□□□□□ -0.93
PTPN9-205ENST00000568108 ALS2Q96Q42 1657 aa9.23□□□□□ -0.93
PTPN9-205ENST00000568108 TRIM37O94972 964 aa9.23□□□□□ -0.93
PTPN9-205ENST00000568108 EZH2Q15910 746 aaKnown RBP9.23□□□□□ -0.93
PTPN9-205ENST00000568108 NBPF8Q3BBV2 869 aa9.23□□□□□ -0.93
PTPN9-205ENST00000568108 CDK19Q9BWU1 502 aa9.23□□□□□ -0.93
PTPN9-205ENST00000568108 USP35Q9P2H5 1018 aa9.23□□□□□ -0.93
PTPN9-205ENST00000568108 APBA3O96018 575 aa9.22□□□□□ -0.93
PTPN9-205ENST00000568108 PDE3BQ13370 1112 aa9.22□□□□□ -0.93
PTPN9-205ENST00000568108 FKBP8Q14318 412 aa9.22□□□□□ -0.93
PTPN9-205ENST00000568108 CAMKK2Q96RR4 588 aa9.22□□□□□ -0.93
PTPN9-205ENST00000568108 CCDC61Q9Y6R9 512 aa9.22□□□□□ -0.93
PTPN9-205ENST00000568108 LRP5O75197 1615 aa9.22□□□□□ -0.93
PTPN9-205ENST00000568108 ABTB2Q8N961 1025 aa9.21□□□□□ -0.94
PTPN9-205ENST00000568108 ACEP12821 1306 aa9.21□□□□□ -0.94
PTPN9-205ENST00000568108 DISP2A7MBM2 1401 aa9.21□□□□□ -0.94
PTPN9-205ENST00000568108 RGPD1P0DJD0 1748 aa9.2□□□□□ -0.94
PTPN9-205ENST00000568108 PLEKHG3A1L390 1219 aa9.2□□□□□ -0.94
PTPN9-205ENST00000568108 LARP1Q6PKG0 1096 aaKnown RBP9.2□□□□□ -0.94
PTPN9-205ENST00000568108 BARGINQ6ZT62 677 aa9.2□□□□□ -0.94
PTPN9-205ENST00000568108 ATP7BP35670 1465 aa9.2□□□□□ -0.94
PTPN9-205ENST00000568108 TCP11L2Q8N4U5 519 aa9.19□□□□□ -0.94
PTPN9-205ENST00000568108 POLR3AO14802 1390 aaPredicted RBP9.19□□□□□ -0.94
PTPN9-205ENST00000568108 THSD7AQ9UPZ6 1657 aa9.19□□□□□ -0.94
PTPN9-205ENST00000568108 NBPF14Q5TI25 921 aa9.18□□□□□ -0.94
PTPN9-205ENST00000568108 SSH2Q76I76 1423 aa9.18□□□□□ -0.94
PTPN9-205ENST00000568108 NLRP13Q86W25 1043 aa9.18□□□□□ -0.94
PTPN9-205ENST00000568108 CRYBG1Q9Y4K1 1723 aa9.18□□□□□ -0.94
PTPN9-205ENST00000568108 PARD3Q8TEW0 1356 aa9.17□□□□□ -0.94
PTPN9-205ENST00000568108 GCP02774 474 aa9.17□□□□□ -0.94
PTPN9-205ENST00000568108 SRPK2P78362 688 aaKnown RBP9.17□□□□□ -0.94
PTPN9-205ENST00000568108 NBPF1Q3BBV0 1214 aa9.17□□□□□ -0.94
PTPN9-205ENST00000568108 THRAP3Q9Y2W1 955 aaKnown RBP9.17□□□□□ -0.94
PTPN9-205ENST00000568108 ITSN1Q15811 1721 aa9.17□□□□□ -0.94
PTPN9-205ENST00000568108 ARHGEF28Q8N1W1 1705 aaKnown RBP9.16□□□□□ -0.94
PTPN9-205ENST00000568108 TNS1Q9HBL0 1735 aaKnown RBP9.16□□□□□ -0.94
PTPN9-205ENST00000568108 CAMTA1Q9Y6Y1 1673 aa9.16□□□□□ -0.94
PTPN9-205ENST00000568108 CPDO75976 1380 aa9.15□□□□□ -0.94
PTPN9-205ENST00000568108 USP19O94966 1318 aa9.15□□□□□ -0.94
PTPN9-205ENST00000568108 ZBTB7CA1YPR0 619 aa9.15□□□□□ -0.94
PTPN9-205ENST00000568108 CABP2Q9NPB3 220 aa9.15□□□□□ -0.94
PTPN9-205ENST00000568108 PHRF1Q9P1Y6 1649 aaKnown RBP9.15□□□□□ -0.94
PTPN9-205ENST00000568108 CENPJQ9HC77 1338 aaPredicted RBP9.14□□□□□ -0.95
PTPN9-205ENST00000568108 C11orf95C9JLR9 678 aaPredicted RBP9.14□□□□□ -0.95
PTPN9-205ENST00000568108 NLRP6P59044 892 aa9.14□□□□□ -0.95
PTPN9-205ENST00000568108 CCER1Q8TC90 406 aaPredicted RBP9.14□□□□□ -0.95
PTPN9-205ENST00000568108 CABP1Q9NZU7 370 aa9.14□□□□□ -0.95
PTPN9-205ENST00000568108 PPIP5K1Q6PFW1 1433 aa9.14□□□□□ -0.95
PTPN9-205ENST00000568108 SPON1Q9HCB6 807 aa9.13□□□□□ -0.95
PTPN9-205ENST00000568108 PPP1R1BQ9UD71 204 aaPredicted RBP9.13□□□□□ -0.95
PTPN9-205ENST00000568108 BRD4O60885 1362 aaPredicted RBP9.12□□□□□ -0.95
PTPN9-205ENST00000568108 KCNQ2O43526 872 aa9.12□□□□□ -0.95
PTPN9-205ENST00000568108 DDB1Q16531 1140 aa9.12□□□□□ -0.95
PTPN9-205ENST00000568108 TOM1L2Q6ZVM7 507 aa9.12□□□□□ -0.95
PTPN9-205ENST00000568108 COL5A2P05997 1499 aaPredicted RBP9.12□□□□□ -0.95
PTPN9-205ENST00000568108 TOPAZ1Q8N9V7 1692 aa9.12□□□□□ -0.95
PTPN9-205ENST00000568108 CRB1P82279 1406 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms