RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 ITGAEP38570 1179 aa25.46■■□□□ 1.67
CLK3-217ENST00000566126 TRPM3Q9HCF6 1732 aaPredicted RBP25.46■■□□□ 1.67
CLK3-217ENST00000566126 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
CLK3-217ENST00000566126 TMEM132EQ6IEE7 984 aa25.44■■□□□ 1.66
CLK3-217ENST00000566126 ALS2Q96Q42 1657 aa25.43■■□□□ 1.66
CLK3-217ENST00000566126 C1QTNF8P60827 252 aa25.43■■□□□ 1.66
CLK3-217ENST00000566126 SPATA31A1Q5TZJ5 1347 aa25.41■■□□□ 1.66
CLK3-217ENST00000566126 CRYBG1Q9Y4K1 1723 aa25.41■■□□□ 1.66
CLK3-217ENST00000566126 YTHDC2Q9H6S0 1430 aaKnown RBP25.38■■□□□ 1.65
CLK3-217ENST00000566126 PMFBP1Q8TBY8 1022 aa25.38■■□□□ 1.65
CLK3-217ENST00000566126 NRKQ7Z2Y5 1582 aa25.38■■□□□ 1.65
CLK3-217ENST00000566126 CASZ1Q86V15 1759 aa25.36■■□□□ 1.65
CLK3-217ENST00000566126 CHD4Q14839 1912 aa25.36■■□□□ 1.65
CLK3-217ENST00000566126 CEP350Q5VT06 3117 aa25.34■■□□□ 1.65
CLK3-217ENST00000566126 SIRT1Q96EB6 747 aa25.34■■□□□ 1.65
CLK3-217ENST00000566126 PRDM11Q9NQV5 511 aa25.32■■□□□ 1.64
CLK3-217ENST00000566126 MYOM1P52179 1685 aa25.32■■□□□ 1.64
CLK3-217ENST00000566126 PIK3C2GO75747 1445 aa25.3■■□□□ 1.64
CLK3-217ENST00000566126 PDE3BQ13370 1112 aa25.29■■□□□ 1.64
CLK3-217ENST00000566126 ANKARQ7Z5J8 1434 aa25.29■■□□□ 1.64
CLK3-217ENST00000566126 STRN4Q9NRL3 753 aa25.28■■□□□ 1.64
CLK3-217ENST00000566126 PDGFDQ9GZP0 370 aaPredicted RBP25.27■■□□□ 1.64
CLK3-217ENST00000566126 BARGINQ6ZT62 677 aa25.26■■□□□ 1.63
CLK3-217ENST00000566126 ANO8Q9HCE9 1232 aaPredicted RBP25.26■■□□□ 1.63
CLK3-217ENST00000566126 USP35Q9P2H5 1018 aa25.26■■□□□ 1.63
CLK3-217ENST00000566126 KIAA0232Q92628 1395 aa25.26■■□□□ 1.63
CLK3-217ENST00000566126 ANKRD30BQ9BXX2 1392 aa25.26■■□□□ 1.63
CLK3-217ENST00000566126 RGPD3A6NKT7 1758 aaPredicted RBP25.26■■□□□ 1.63
CLK3-217ENST00000566126 RGPD4Q7Z3J3 1758 aa25.26■■□□□ 1.63
CLK3-217ENST00000566126 PTGER2P43116 358 aa25.25■■□□□ 1.63
CLK3-217ENST00000566126 CHRNA2Q15822 529 aa25.25■■□□□ 1.63
CLK3-217ENST00000566126 ACIN1Q9UKV3 1341 aaKnown RBP25.25■■□□□ 1.63
CLK3-217ENST00000566126 SPATA31E1Q6ZUB1 1445 aa25.24■■□□□ 1.63
CLK3-217ENST00000566126 GPRASP1Q5JY77 1395 aa25.24■■□□□ 1.63
CLK3-217ENST00000566126 SAFB2Q14151 953 aaKnown RBP eCLIP25.24■■□□□ 1.63
CLK3-217ENST00000566126 RGL3Q3MIN7 710 aa25.24■■□□□ 1.63
CLK3-217ENST00000566126 ZBTB7AO95365 584 aa25.22■■□□□ 1.63
CLK3-217ENST00000566126 PRAM1Q96QH2 718 aa25.21■■□□□ 1.63
CLK3-217ENST00000566126 PHRF1Q9P1Y6 1649 aaKnown RBP25.21■■□□□ 1.63
CLK3-217ENST00000566126 SYT17Q9BSW7 474 aa25.2■■□□□ 1.62
CLK3-217ENST00000566126 SSH2Q76I76 1423 aa25.2■■□□□ 1.62
CLK3-217ENST00000566126 PRR36Q9H6K5 1346 aa25.18■■□□□ 1.62
CLK3-217ENST00000566126 SLC4A1APQ9BWU0 796 aaKnown RBP25.18■■□□□ 1.62
CLK3-217ENST00000566126 FHDC1Q9C0D6 1143 aaPredicted RBP25.18■■□□□ 1.62
CLK3-217ENST00000566126 SBF2Q86WG5 1849 aa25.18■■□□□ 1.62
CLK3-217ENST00000566126 PEAK1Q9H792 1746 aa25.17■■□□□ 1.62
CLK3-217ENST00000566126 C14orf93Q9H972 538 aaKnown RBP25.17■■□□□ 1.62
CLK3-217ENST00000566126 PARP4Q9UKK3 1724 aaKnown RBP25.17■■□□□ 1.62
CLK3-217ENST00000566126 PLSCR1O15162 318 aa25.16■■□□□ 1.62
CLK3-217ENST00000566126 PAK3O75914 559 aaPredicted RBP25.16■■□□□ 1.62
CLK3-217ENST00000566126 ATF5Q9Y2D1 282 aaPredicted RBP25.16■■□□□ 1.62
CLK3-217ENST00000566126 ZC3H6P61129 1189 aaKnown RBP25.15■■□□□ 1.62
CLK3-217ENST00000566126 DHX57Q6P158 1386 aaKnown RBP25.15■■□□□ 1.62
CLK3-217ENST00000566126 LARP1Q6PKG0 1096 aaKnown RBP25.14■■□□□ 1.62
CLK3-217ENST00000566126 TCP11L2Q8N4U5 519 aa25.14■■□□□ 1.62
CLK3-217ENST00000566126 DLC1Q96QB1 1528 aa25.12■■□□□ 1.61
CLK3-217ENST00000566126 GIGYF1O75420 1035 aaPredicted RBP25.12■■□□□ 1.61
CLK3-217ENST00000566126 EVA1CP58658 441 aa25.12■■□□□ 1.61
CLK3-217ENST00000566126 CFAP70Q5T0N1 1121 aa25.11■■□□□ 1.61
CLK3-217ENST00000566126 PROM2Q8N271 834 aa25.11■■□□□ 1.61
CLK3-217ENST00000566126 TULP4Q9NRJ4 1543 aa25.11■■□□□ 1.61
CLK3-217ENST00000566126 HIRIP3Q9BW71 556 aaPredicted RBP25.1■■□□□ 1.61
CLK3-217ENST00000566126 LMO7Q8WWI1 1683 aa25.1■■□□□ 1.61
CLK3-217ENST00000566126 C11orf95C9JLR9 678 aaPredicted RBP25.09■■□□□ 1.61
CLK3-217ENST00000566126 PTF1AQ7RTS3 328 aa25.09■■□□□ 1.61
CLK3-217ENST00000566126 NGDNQ8NEJ9 315 aaKnown RBP25.09■■□□□ 1.61
CLK3-217ENST00000566126 SGIP1Q9BQI5 828 aa25.09■■□□□ 1.61
CLK3-217ENST00000566126 BCL11BQ9C0K0 894 aaPredicted RBP25.09■■□□□ 1.61
CLK3-217ENST00000566126 POGKQ9P215 609 aa25.09■■□□□ 1.61
CLK3-217ENST00000566126 OVOS2A0A0G2JMS6 1433 aa25.09■■□□□ 1.61
CLK3-217ENST00000566126 OVOS2A0A0J9YW53 1432 aa25.09■■□□□ 1.61
CLK3-217ENST00000566126 OVOS2Q6IE36 1432 aa25.09■■□□□ 1.61
CLK3-217ENST00000566126 THRAP3Q9Y2W1 955 aaKnown RBP25.07■■□□□ 1.6
CLK3-217ENST00000566126 EIF3AQ14152 1382 aaKnown RBP25.05■■□□□ 1.6
CLK3-217ENST00000566126 NUTM2GQ5VZR2 741 aa25.04■■□□□ 1.6
CLK3-217ENST00000566126 ATP7BP35670 1465 aa25.03■■□□□ 1.6
CLK3-217ENST00000566126 MTFR1LQ9H019 292 aa25.03■■□□□ 1.6
CLK3-217ENST00000566126 LRRC37A3O60309 1634 aa25.03■■□□□ 1.6
CLK3-217ENST00000566126 GOLGB1Q14789 3259 aaKnown RBP25.02■■□□□ 1.6
CLK3-217ENST00000566126 MINK1Q8N4C8 1332 aaPredicted RBP25.02■■□□□ 1.6
CLK3-217ENST00000566126 SHANK3Q9BYB0 1731 aa25.01■■□□□ 1.59
CLK3-217ENST00000566126 WASLO00401 505 aaPredicted RBP25.01■■□□□ 1.59
CLK3-217ENST00000566126 SLC15A2Q16348 729 aa25■■□□□ 1.59
CLK3-217ENST00000566126 STK32BQ9NY57 414 aa25■■□□□ 1.59
CLK3-217ENST00000566126 MAP3K5Q99683 1374 aa25■■□□□ 1.59
CLK3-217ENST00000566126 CPDO75976 1380 aa24.99■■□□□ 1.59
CLK3-217ENST00000566126 ITSN1Q15811 1721 aa24.99■■□□□ 1.59
CLK3-217ENST00000566126 ADGRB1O14514 1584 aa24.98■■□□□ 1.59
CLK3-217ENST00000566126 COL5A2P05997 1499 aaPredicted RBP24.98■■□□□ 1.59
CLK3-217ENST00000566126 ARXQ96QS3 562 aa24.98■■□□□ 1.59
CLK3-217ENST00000566126 TXNRD1Q16881 649 aa24.96■■□□□ 1.59
CLK3-217ENST00000566126 GPR162Q16538 588 aa24.95■■□□□ 1.58
CLK3-217ENST00000566126 PPARGC1BQ86YN6 1023 aaKnown RBP24.95■■□□□ 1.58
CLK3-217ENST00000566126 TRAK1Q9UPV9 953 aa24.95■■□□□ 1.58
CLK3-217ENST00000566126 CRB1P82279 1406 aa24.95■■□□□ 1.58
CLK3-217ENST00000566126 DDB1Q16531 1140 aa24.93■■□□□ 1.58
CLK3-217ENST00000566126 BCL9O00512 1426 aa24.92■■□□□ 1.58
CLK3-217ENST00000566126 AKAP12Q02952 1782 aa24.91■■□□□ 1.58
CLK3-217ENST00000566126 MARCH10Q8NA82 808 aaPredicted RBP24.91■■□□□ 1.58
CLK3-217ENST00000566126 WNK3Q9BYP7 1800 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms