RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 SLF2Q8IX21 1173 aa8.64□□□□□ -1.03
AC055855.3-201ENST00000564269 KDM2AQ9Y2K7 1162 aa8.64□□□□□ -1.03
AC055855.3-201ENST00000564269 ABCA6Q8N139 1617 aa8.63□□□□□ -1.03
AC055855.3-201ENST00000564269 LTBP4Q8N2S1 1624 aa8.63□□□□□ -1.03
AC055855.3-201ENST00000564269 ZNF516Q92618 1163 aa8.63□□□□□ -1.03
AC055855.3-201ENST00000564269 NCOA1Q15788 1441 aa8.63□□□□□ -1.03
AC055855.3-201ENST00000564269 CASKIN1Q8WXD9 1431 aa8.63□□□□□ -1.03
AC055855.3-201ENST00000564269 CNTLNQ9NXG0 1405 aa8.63□□□□□ -1.03
AC055855.3-201ENST00000564269 RBM46Q8TBY0 533 aaKnown RBP8.62□□□□□ -1.03
AC055855.3-201ENST00000564269 IL21Q9HBE4 155 aa8.62□□□□□ -1.03
AC055855.3-201ENST00000564269 ABCC1P33527 1531 aa8.62□□□□□ -1.03
AC055855.3-201ENST00000564269 ZMYM3Q14202 1370 aa8.61□□□□□ -1.03
AC055855.3-201ENST00000564269 DNAJB2P25686 324 aa8.61□□□□□ -1.03
AC055855.3-201ENST00000564269 ZNF777Q9ULD5 760 aaPredicted RBP8.61□□□□□ -1.03
AC055855.3-201ENST00000564269 NPATQ14207 1427 aa8.61□□□□□ -1.03
AC055855.3-201ENST00000564269 CDC42BPBQ9Y5S2 1711 aa8.6□□□□□ -1.03
AC055855.3-201ENST00000564269 C3P01024 1663 aa8.6□□□□□ -1.03
AC055855.3-201ENST00000564269 IQSEC2Q5JU85 1478 aa8.6□□□□□ -1.03
AC055855.3-201ENST00000564269 CCDC18Q5T9S5 1454 aa8.6□□□□□ -1.03
AC055855.3-201ENST00000564269 RCCD1A6NED2 376 aa8.6□□□□□ -1.03
AC055855.3-201ENST00000564269 HNRNPMP52272 730 aaKnown RBP eCLIP8.6□□□□□ -1.03
AC055855.3-201ENST00000564269 IRX2Q9BZI1 471 aaPredicted RBP8.6□□□□□ -1.03
AC055855.3-201ENST00000564269 TMEM134Q9H6X4 195 aa8.6□□□□□ -1.03
AC055855.3-201ENST00000564269 SPAG9O60271 1321 aaKnown RBP8.59□□□□□ -1.03
AC055855.3-201ENST00000564269 PREX2Q70Z35 1606 aa8.59□□□□□ -1.03
AC055855.3-201ENST00000564269 SLC4A3P48751 1232 aa8.59□□□□□ -1.03
AC055855.3-201ENST00000564269 COPS2P61201 443 aa8.59□□□□□ -1.03
AC055855.3-201ENST00000564269 NECTIN2Q92692 538 aa8.59□□□□□ -1.03
AC055855.3-201ENST00000564269 GPATCH8Q9UKJ3 1502 aaKnown RBP8.59□□□□□ -1.03
AC055855.3-201ENST00000564269 KIDINS220Q9ULH0 1771 aa8.58□□□□□ -1.04
AC055855.3-201ENST00000564269 ZNF335Q9H4Z2 1342 aaPredicted RBP8.58□□□□□ -1.04
AC055855.3-201ENST00000564269 LRRIQ1Q96JM4 1722 aa8.58□□□□□ -1.04
AC055855.3-201ENST00000564269 SAMD9LQ8IVG5 1584 aa8.58□□□□□ -1.04
AC055855.3-201ENST00000564269 NKX2-3Q8TAU0 364 aa8.58□□□□□ -1.04
AC055855.3-201ENST00000564269 CAMSAP1Q5T5Y3 1602 aa8.58□□□□□ -1.04
AC055855.3-201ENST00000564269 SETD1BQ9UPS6 1966 aaKnown RBP8.57□□□□□ -1.04
AC055855.3-201ENST00000564269 ITSN2Q9NZM3 1697 aa8.57□□□□□ -1.04
AC055855.3-201ENST00000564269 FECHP22830 423 aa8.57□□□□□ -1.04
AC055855.3-201ENST00000564269 HIC1Q14526 733 aa8.57□□□□□ -1.04
AC055855.3-201ENST00000564269 SMYD5Q6GMV2 418 aa8.57□□□□□ -1.04
AC055855.3-201ENST00000564269 SPATA31D1Q6ZQQ2 1576 aa8.56□□□□□ -1.04
AC055855.3-201ENST00000564269 PTPRKQ15262 1439 aa8.56□□□□□ -1.04
AC055855.3-201ENST00000564269 KIAA1107Q9UPP5 1409 aa8.56□□□□□ -1.04
AC055855.3-201ENST00000564269 UBAP1LF5GYI3 381 aa8.56□□□□□ -1.04
AC055855.3-201ENST00000564269 GPR37O15354 613 aa8.56□□□□□ -1.04
AC055855.3-201ENST00000564269 GGT6Q6P531 493 aa8.56□□□□□ -1.04
AC055855.3-201ENST00000564269 CFDP1Q9UEE9 299 aaPredicted RBP8.56□□□□□ -1.04
AC055855.3-201ENST00000564269 SYCP2Q9BX26 1530 aa8.55□□□□□ -1.04
AC055855.3-201ENST00000564269 PPP1R18Q6NYC8 613 aa8.55□□□□□ -1.04
AC055855.3-201ENST00000564269 PXYLP1Q8TE99 480 aa8.55□□□□□ -1.04
AC055855.3-201ENST00000564269 A2MP01023 1474 aa8.55□□□□□ -1.04
AC055855.3-201ENST00000564269 PLA2R1Q13018 1463 aa8.55□□□□□ -1.04
AC055855.3-201ENST00000564269 TCOF1Q13428 1488 aaKnown RBP8.55□□□□□ -1.04
AC055855.3-201ENST00000564269 FYCO1Q9BQS8 1478 aa8.55□□□□□ -1.04
AC055855.3-201ENST00000564269 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.54□□□□□ -1.04
AC055855.3-201ENST00000564269 PCDHB3Q9Y5E6 796 aa8.54□□□□□ -1.04
AC055855.3-201ENST00000564269 ATP7AQ04656 1500 aa8.54□□□□□ -1.04
AC055855.3-201ENST00000564269 PLXNC1O60486 1568 aa8.53□□□□□ -1.04
AC055855.3-201ENST00000564269 PLEKHH2Q8IVE3 1493 aa8.53□□□□□ -1.04
AC055855.3-201ENST00000564269 CCNB3Q8WWL7 1395 aa8.53□□□□□ -1.04
AC055855.3-201ENST00000564269 GNPATO15228 680 aa8.53□□□□□ -1.04
AC055855.3-201ENST00000564269 OATP04181 439 aa8.53□□□□□ -1.04
AC055855.3-201ENST00000564269 BLOC1S3Q6QNY0 202 aa8.53□□□□□ -1.04
AC055855.3-201ENST00000564269 METTL3Q86U44 580 aaKnown RBP8.53□□□□□ -1.04
AC055855.3-201ENST00000564269 PRR14Q9BWN1 585 aa8.53□□□□□ -1.04
AC055855.3-201ENST00000564269 CDC42BPAQ5VT25 1732 aa8.53□□□□□ -1.04
AC055855.3-201ENST00000564269 ZNF644Q9H582 1327 aaPredicted RBP8.53□□□□□ -1.04
AC055855.3-201ENST00000564269 MROH2AA6NES4 1674 aa8.53□□□□□ -1.04
AC055855.3-201ENST00000564269 ZPR1O75312 459 aa8.52□□□□□ -1.05
AC055855.3-201ENST00000564269 CFHP08603 1231 aa8.52□□□□□ -1.05
AC055855.3-201ENST00000564269 SLC10A3P09131 477 aa8.52□□□□□ -1.05
AC055855.3-201ENST00000564269 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.52□□□□□ -1.05
AC055855.3-201ENST00000564269 INO80Q9ULG1 1556 aaPredicted RBP8.52□□□□□ -1.05
AC055855.3-201ENST00000564269 CEP170BQ9Y4F5 1589 aaPredicted RBP8.52□□□□□ -1.05
AC055855.3-201ENST00000564269 MBD5Q9P267 1494 aa8.51□□□□□ -1.05
AC055855.3-201ENST00000564269 DHX29Q7Z478 1369 aaKnown RBP8.51□□□□□ -1.05
AC055855.3-201ENST00000564269 FBXO31Q5XUX0 539 aaPredicted RBP8.51□□□□□ -1.05
AC055855.3-201ENST00000564269 PRKD2Q9BZL6 878 aa8.51□□□□□ -1.05
AC055855.3-201ENST00000564269 RTEL1-TNFRSF6BF6WH68 1400 aa8.5□□□□□ -1.05
AC055855.3-201ENST00000564269 HSPA1LP34931 641 aa8.5□□□□□ -1.05
AC055855.3-201ENST00000564269 KMT5BQ4FZB7 885 aa8.5□□□□□ -1.05
AC055855.3-201ENST00000564269 NLRP7Q8WX94 980 aa8.5□□□□□ -1.05
AC055855.3-201ENST00000564269 MYO3AQ8NEV4 1616 aa8.5□□□□□ -1.05
AC055855.3-201ENST00000564269 A2ML1A8K2U0 1454 aa8.5□□□□□ -1.05
AC055855.3-201ENST00000564269 CLTCQ00610 1675 aaKnown RBP8.49□□□□□ -1.05
AC055855.3-201ENST00000564269 MTUS2Q5JR59 1369 aa8.49□□□□□ -1.05
AC055855.3-201ENST00000564269 SUPT6HQ7KZ85 1726 aaKnown RBP8.49□□□□□ -1.05
AC055855.3-201ENST00000564269 ACTN4O43707 911 aaKnown RBP8.49□□□□□ -1.05
AC055855.3-201ENST00000564269 TLL1O43897 1013 aa8.49□□□□□ -1.05
AC055855.3-201ENST00000564269 GPIHBP1Q8IV16 184 aa8.49□□□□□ -1.05
AC055855.3-201ENST00000564269 VSIG10Q8N0Z9 540 aa8.49□□□□□ -1.05
AC055855.3-201ENST00000564269 ZNF142P52746 1687 aaPredicted RBP8.49□□□□□ -1.05
AC055855.3-201ENST00000564269 TOM1O60784 492 aa8.48□□□□□ -1.05
AC055855.3-201ENST00000564269 PIP4K2BP78356 416 aa8.48□□□□□ -1.05
AC055855.3-201ENST00000564269 TNRQ92752 1358 aa8.48□□□□□ -1.05
AC055855.3-201ENST00000564269 DNMT1P26358 1616 aaKnown RBP8.47□□□□□ -1.05
AC055855.3-201ENST00000564269 KIF3BO15066 747 aa8.47□□□□□ -1.05
AC055855.3-201ENST00000564269 ANKLE2Q86XL3 938 aa8.47□□□□□ -1.05
AC055855.3-201ENST00000564269 WASHC2CQ9Y4E1 1318 aa8.47□□□□□ -1.05
AC055855.3-201ENST00000564269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms