RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 NGDNQ8NEJ9 315 aaKnown RBP18.2■□□□□ 0.5
CHRNA3-208ENST00000561128 ACEP12821 1306 aa18.2■□□□□ 0.5
CHRNA3-208ENST00000561128 NRKQ7Z2Y5 1582 aa18.19■□□□□ 0.5
CHRNA3-208ENST00000561128 NWD2Q9ULI1 1742 aa18.19■□□□□ 0.5
CHRNA3-208ENST00000561128 RBM6P78332 1123 aaKnown RBP18.17■□□□□ 0.5
CHRNA3-208ENST00000561128 SRPK2P78362 688 aaKnown RBP18.17■□□□□ 0.5
CHRNA3-208ENST00000561128 PLEKHG3A1L390 1219 aa18.16■□□□□ 0.5
CHRNA3-208ENST00000561128 CCDC61Q9Y6R9 512 aa18.16■□□□□ 0.5
CHRNA3-208ENST00000561128 PIK3C2AO00443 1686 aa18.15■□□□□ 0.5
CHRNA3-208ENST00000561128 COL14A1Q05707 1796 aaKnown RBP18.15■□□□□ 0.5
CHRNA3-208ENST00000561128 PAK3O75914 559 aaPredicted RBP18.15■□□□□ 0.5
CHRNA3-208ENST00000561128 NUTM2GQ5VZR2 741 aa18.15■□□□□ 0.5
CHRNA3-208ENST00000561128 TRPC5Q9UL62 973 aaPredicted RBP18.15■□□□□ 0.5
CHRNA3-208ENST00000561128 AKAP12Q02952 1782 aa18.14■□□□□ 0.5
CHRNA3-208ENST00000561128 FAM83GA6ND36 823 aa18.13■□□□□ 0.49
CHRNA3-208ENST00000561128 HAP1P54257 671 aaPredicted RBP18.13■□□□□ 0.49
CHRNA3-208ENST00000561128 USP6P35125 1406 aa18.13■□□□□ 0.49
CHRNA3-208ENST00000561128 BRWD3Q6RI45 1802 aa18.12■□□□□ 0.49
CHRNA3-208ENST00000561128 UNC5CLQ8IV45 518 aa18.12■□□□□ 0.49
CHRNA3-208ENST00000561128 UPF1Q92900 1129 aaKnown RBP eCLIP18.12■□□□□ 0.49
CHRNA3-208ENST00000561128 SSH2Q76I76 1423 aa18.12■□□□□ 0.49
CHRNA3-208ENST00000561128 CARD11Q9BXL7 1154 aa18.11■□□□□ 0.49
CHRNA3-208ENST00000561128 PCGF6Q9BYE7 350 aa18.11■□□□□ 0.49
CHRNA3-208ENST00000561128 CABP1Q9NZU7 370 aa18.11■□□□□ 0.49
CHRNA3-208ENST00000561128 MON2Q7Z3U7 1717 aa18.1■□□□□ 0.49
CHRNA3-208ENST00000561128 LMO7Q8WWI1 1683 aa18.1■□□□□ 0.49
CHRNA3-208ENST00000561128 SBNO2Q9Y2G9 1366 aa18.1■□□□□ 0.49
CHRNA3-208ENST00000561128 CD163L1Q9NR16 1453 aa18.09■□□□□ 0.49
CHRNA3-208ENST00000561128 KIAA0232Q92628 1395 aa18.09■□□□□ 0.49
CHRNA3-208ENST00000561128 USP19O94966 1318 aa18.09■□□□□ 0.49
CHRNA3-208ENST00000561128 EVC2Q86UK5 1308 aa18.09■□□□□ 0.49
CHRNA3-208ENST00000561128 GJD4Q96KN9 370 aaPredicted RBP18.09■□□□□ 0.49
CHRNA3-208ENST00000561128 SLIT3O75094 1523 aa18.08■□□□□ 0.48
CHRNA3-208ENST00000561128 CHRNA2Q15822 529 aa18.07■□□□□ 0.48
CHRNA3-208ENST00000561128 CPSF1Q10570 1443 aaKnown RBP18.06■□□□□ 0.48
CHRNA3-208ENST00000561128 VPS72Q15906 364 aa18.05■□□□□ 0.48
CHRNA3-208ENST00000561128 BTG4Q9NY30 223 aa18.05■□□□□ 0.48
CHRNA3-208ENST00000561128 THSD7AQ9UPZ6 1657 aa18.05■□□□□ 0.48
CHRNA3-208ENST00000561128 CAMTA1Q9Y6Y1 1673 aa18.05■□□□□ 0.48
CHRNA3-208ENST00000561128 ZC3H6P61129 1189 aaKnown RBP18.04■□□□□ 0.48
CHRNA3-208ENST00000561128 ABTB2Q8N961 1025 aa18.03■□□□□ 0.48
CHRNA3-208ENST00000561128 TESK2Q96S53 571 aa18.03■□□□□ 0.48
CHRNA3-208ENST00000561128 PRDM11Q9NQV5 511 aa18.03■□□□□ 0.48
CHRNA3-208ENST00000561128 ATAD2Q6PL18 1390 aa18.03■□□□□ 0.48
CHRNA3-208ENST00000561128 COL18A1P39060 1754 aa18.01■□□□□ 0.47
CHRNA3-208ENST00000561128 USP54Q70EL1 1684 aa18■□□□□ 0.47
CHRNA3-208ENST00000561128 NFAT5O94916 1531 aa18■□□□□ 0.47
CHRNA3-208ENST00000561128 ST20-MTHFSA0A0A6YYL1 179 aa18■□□□□ 0.47
CHRNA3-208ENST00000561128 CCDC9Q9Y3X0 531 aaKnown RBP18■□□□□ 0.47
CHRNA3-208ENST00000561128 CPDO75976 1380 aa18■□□□□ 0.47
CHRNA3-208ENST00000561128 TTC21BQ7Z4L5 1316 aa17.99■□□□□ 0.47
CHRNA3-208ENST00000561128 ZRANB1Q9UGI0 708 aa17.99■□□□□ 0.47
CHRNA3-208ENST00000561128 USP47Q96K76 1375 aa17.99■□□□□ 0.47
CHRNA3-208ENST00000561128 SEPT12Q8IYM1 358 aa17.98■□□□□ 0.47
CHRNA3-208ENST00000561128 BRD4O60885 1362 aaPredicted RBP17.98■□□□□ 0.47
CHRNA3-208ENST00000561128 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
CHRNA3-208ENST00000561128 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
CHRNA3-208ENST00000561128 COL5A2P05997 1499 aaPredicted RBP17.97■□□□□ 0.47
CHRNA3-208ENST00000561128 KTN1Q86UP2 1357 aaKnown RBP17.97■□□□□ 0.47
CHRNA3-208ENST00000561128 GCP02774 474 aa17.97■□□□□ 0.47
CHRNA3-208ENST00000561128 FAM98CQ17RN3 349 aaKnown RBP17.97■□□□□ 0.47
CHRNA3-208ENST00000561128 A0A1W2PP64 1363 aa17.96■□□□□ 0.47
CHRNA3-208ENST00000561128 SLC12A5Q9H2X9 1139 aa17.96■□□□□ 0.47
CHRNA3-208ENST00000561128 RGPD5Q99666 1765 aa17.96■□□□□ 0.47
CHRNA3-208ENST00000561128 MYOM1P52179 1685 aa17.96■□□□□ 0.47
CHRNA3-208ENST00000561128 EP400Q96L91 3159 aa17.95■□□□□ 0.46
CHRNA3-208ENST00000561128 ONECUT3O60422 494 aaPredicted RBP17.95■□□□□ 0.46
CHRNA3-208ENST00000561128 NLRP6P59044 892 aa17.95■□□□□ 0.46
CHRNA3-208ENST00000561128 NLRP13Q86W25 1043 aa17.95■□□□□ 0.46
CHRNA3-208ENST00000561128 STRN4Q9NRL3 753 aa17.95■□□□□ 0.46
CHRNA3-208ENST00000561128 SPATA31A1Q5TZJ5 1347 aa17.94■□□□□ 0.46
CHRNA3-208ENST00000561128 NME9Q86XW9 330 aa17.93■□□□□ 0.46
CHRNA3-208ENST00000561128 CLSPNQ9HAW4 1339 aa17.93■□□□□ 0.46
CHRNA3-208ENST00000561128 ZBTB7CA1YPR0 619 aa17.92■□□□□ 0.46
CHRNA3-208ENST00000561128 FAM182BQ5T319 152 aa17.92■□□□□ 0.46
CHRNA3-208ENST00000561128 LARP1Q6PKG0 1096 aaKnown RBP17.92■□□□□ 0.46
CHRNA3-208ENST00000561128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.92■□□□□ 0.46
CHRNA3-208ENST00000561128 WNK3Q9BYP7 1800 aa17.92■□□□□ 0.46
CHRNA3-208ENST00000561128 SOX12O15370 315 aa17.91■□□□□ 0.46
CHRNA3-208ENST00000561128 TMC1Q8TDI8 760 aa17.91■□□□□ 0.46
CHRNA3-208ENST00000561128 TTC21AQ8NDW8 1320 aa17.91■□□□□ 0.46
CHRNA3-208ENST00000561128 OVOS2A0A0J9YW53 1432 aa17.9■□□□□ 0.46
CHRNA3-208ENST00000561128 OVOS2Q6IE36 1432 aa17.9■□□□□ 0.46
CHRNA3-208ENST00000561128 EDC4Q6P2E9 1401 aaKnown RBP17.9■□□□□ 0.46
CHRNA3-208ENST00000561128 TNS1Q9HBL0 1735 aaKnown RBP17.89■□□□□ 0.46
CHRNA3-208ENST00000561128 LTN1O94822 1766 aa17.89■□□□□ 0.45
CHRNA3-208ENST00000561128 A0A0G2JS52 829 aa17.89■□□□□ 0.45
CHRNA3-208ENST00000561128 MYT1Q01538 1121 aa17.89■□□□□ 0.45
CHRNA3-208ENST00000561128 ZNF692Q9BU19 519 aaPredicted RBP17.89■□□□□ 0.45
CHRNA3-208ENST00000561128 AXIN2Q9Y2T1 843 aa17.89■□□□□ 0.45
CHRNA3-208ENST00000561128 LRRC37A3O60309 1634 aa17.89■□□□□ 0.45
CHRNA3-208ENST00000561128 AATKQ6ZMQ8 1374 aa17.89■□□□□ 0.45
CHRNA3-208ENST00000561128 USP31Q70CQ4 1352 aa17.89■□□□□ 0.45
CHRNA3-208ENST00000561128 KRT27Q7Z3Y8 459 aa17.88■□□□□ 0.45
CHRNA3-208ENST00000561128 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
CHRNA3-208ENST00000561128 PARP4Q9UKK3 1724 aaKnown RBP17.87■□□□□ 0.45
CHRNA3-208ENST00000561128 CCER1Q8TC90 406 aaPredicted RBP17.87■□□□□ 0.45
CHRNA3-208ENST00000561128 BLMP54132 1417 aaPredicted RBP17.87■□□□□ 0.45
CHRNA3-208ENST00000561128 ARHGEF25Q86VW2 580 aa17.86■□□□□ 0.45
CHRNA3-208ENST00000561128 CRB1P82279 1406 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms