RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 TAOK2Q9UL54 1235 aa9.85□□□□□ -0.83
IRF9-208ENST00000560311 SPHKAPQ2M3C7 1700 aa9.85□□□□□ -0.83
IRF9-208ENST00000560311 ZFYVE9O95405 1425 aa9.84□□□□□ -0.83
IRF9-208ENST00000560311 TRPM2O94759 1503 aa9.84□□□□□ -0.83
IRF9-208ENST00000560311 STAC3Q96MF2 364 aa9.84□□□□□ -0.83
IRF9-208ENST00000560311 PTPN5P54829 565 aa9.83□□□□□ -0.84
IRF9-208ENST00000560311 IDI1Q13907 227 aa9.83□□□□□ -0.84
IRF9-208ENST00000560311 SLC52A1Q9NWF4 448 aa9.83□□□□□ -0.84
IRF9-208ENST00000560311 LTKP29376 864 aa9.82□□□□□ -0.84
IRF9-208ENST00000560311 STRCP1A6NGW2 1772 aa9.82□□□□□ -0.84
IRF9-208ENST00000560311 CFAP65Q6ZU64 1925 aaKnown RBP9.82□□□□□ -0.84
IRF9-208ENST00000560311 CLTCL1P53675 1640 aa9.82□□□□□ -0.84
IRF9-208ENST00000560311 RIMS2Q9UQ26 1411 aa9.82□□□□□ -0.84
IRF9-208ENST00000560311 NWD1Q149M9 1564 aa9.81□□□□□ -0.84
IRF9-208ENST00000560311 PPP1R37O75864 691 aa9.81□□□□□ -0.84
IRF9-208ENST00000560311 TXNDC2Q86VQ3 553 aa9.81□□□□□ -0.84
IRF9-208ENST00000560311 PTCD2Q8WV60 388 aaKnown RBP9.81□□□□□ -0.84
IRF9-208ENST00000560311 EID1Q9Y6B2 187 aa9.81□□□□□ -0.84
IRF9-208ENST00000560311 MYO5BQ9ULV0 1848 aa9.8□□□□□ -0.84
IRF9-208ENST00000560311 PPP4R3BQ5MIZ7 849 aa9.8□□□□□ -0.84
IRF9-208ENST00000560311 LRRC7Q96NW7 1537 aa9.8□□□□□ -0.84
IRF9-208ENST00000560311 PLEKHG1Q9ULL1 1385 aa9.79□□□□□ -0.84
IRF9-208ENST00000560311 KCNK17Q96T54 332 aa9.79□□□□□ -0.84
IRF9-208ENST00000560311 DIP2AQ14689 1571 aa9.79□□□□□ -0.84
IRF9-208ENST00000560311 IRX2Q9BZI1 471 aaPredicted RBP9.78□□□□□ -0.84
IRF9-208ENST00000560311 NKTRP30414 1462 aaKnown RBP9.78□□□□□ -0.84
IRF9-208ENST00000560311 ALKQ9UM73 1620 aa9.78□□□□□ -0.84
IRF9-208ENST00000560311 NEXMIFQ5QGS0 1516 aa9.77□□□□□ -0.85
IRF9-208ENST00000560311 UBAP1LF5GYI3 381 aa9.76□□□□□ -0.85
IRF9-208ENST00000560311 PPP1R15AO75807 674 aaPredicted RBP9.76□□□□□ -0.85
IRF9-208ENST00000560311 CHGAP10645 457 aaKnown RBP9.76□□□□□ -0.85
IRF9-208ENST00000560311 SETBP1Q9Y6X0 1596 aa9.75□□□□□ -0.85
IRF9-208ENST00000560311 NRXN3Q9Y4C0 1643 aa9.75□□□□□ -0.85
IRF9-208ENST00000560311 PLPP6Q8IY26 295 aa9.75□□□□□ -0.85
IRF9-208ENST00000560311 TRIM52Q96A61 297 aa9.75□□□□□ -0.85
IRF9-208ENST00000560311 VPS9D1Q9Y2B5 631 aa9.75□□□□□ -0.85
IRF9-208ENST00000560311 ADAMTS13Q76LX8 1427 aa9.74□□□□□ -0.85
IRF9-208ENST00000560311 SLC26A8Q96RN1 970 aa9.74□□□□□ -0.85
IRF9-208ENST00000560311 RGS20O76081 388 aa9.73□□□□□ -0.85
IRF9-208ENST00000560311 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.73□□□□□ -0.85
IRF9-208ENST00000560311 SETD5Q9C0A6 1442 aa9.73□□□□□ -0.85
IRF9-208ENST00000560311 XIRP1Q702N8 1843 aaKnown RBP9.72□□□□□ -0.85
IRF9-208ENST00000560311 FOXK1P85037 733 aa9.72□□□□□ -0.85
IRF9-208ENST00000560311 NUTM2DQ5VT03 806 aaPredicted RBP9.72□□□□□ -0.85
IRF9-208ENST00000560311 BCANQ96GW7 911 aa9.72□□□□□ -0.85
IRF9-208ENST00000560311 TMEM94Q12767 1356 aa9.72□□□□□ -0.85
IRF9-208ENST00000560311 RAB3GAP2Q9H2M9 1393 aa9.72□□□□□ -0.85
IRF9-208ENST00000560311 XRN1Q8IZH2 1706 aaKnown RBP9.71□□□□□ -0.85
IRF9-208ENST00000560311 KIF1BO60333 1816 aa9.71□□□□□ -0.85
IRF9-208ENST00000560311 A0A0G2JS52 829 aa9.71□□□□□ -0.86
IRF9-208ENST00000560311 ECM2O94769 699 aaPredicted RBP9.71□□□□□ -0.86
IRF9-208ENST00000560311 HDGFP51858 240 aaKnown RBP9.71□□□□□ -0.86
IRF9-208ENST00000560311 IFFO2Q5TF58 517 aa9.71□□□□□ -0.86
IRF9-208ENST00000560311 CCDC144AA2RUR9 1427 aa9.71□□□□□ -0.86
IRF9-208ENST00000560311 KCNA6P17658 529 aa9.7□□□□□ -0.86
IRF9-208ENST00000560311 PIP4K2BP78356 416 aa9.7□□□□□ -0.86
IRF9-208ENST00000560311 ZNF326Q5BKZ1 582 aaKnown RBP9.7□□□□□ -0.86
IRF9-208ENST00000560311 TBC1D12O60347 775 aa9.69□□□□□ -0.86
IRF9-208ENST00000560311 TOM1O60784 492 aa9.69□□□□□ -0.86
IRF9-208ENST00000560311 DSG2Q14126 1118 aa9.69□□□□□ -0.86
IRF9-208ENST00000560311 THSD4Q6ZMP0 1018 aa9.69□□□□□ -0.86
IRF9-208ENST00000560311 PIK3R4Q99570 1358 aa9.69□□□□□ -0.86
IRF9-208ENST00000560311 CHD2O14647 1828 aaKnown RBP9.68□□□□□ -0.86
IRF9-208ENST00000560311 SETD1AO15047 1707 aaKnown RBP9.68□□□□□ -0.86
IRF9-208ENST00000560311 PTPRUQ92729 1446 aa9.68□□□□□ -0.86
IRF9-208ENST00000560311 PPLO60437 1756 aa9.68□□□□□ -0.86
IRF9-208ENST00000560311 SPATA31E1Q6ZUB1 1445 aa9.67□□□□□ -0.86
IRF9-208ENST00000560311 RGL2O15211 777 aa9.67□□□□□ -0.86
IRF9-208ENST00000560311 MPHOSPH9Q99550 1183 aa9.67□□□□□ -0.86
IRF9-208ENST00000560311 GPHNQ9NQX3 736 aaPredicted RBP9.67□□□□□ -0.86
IRF9-208ENST00000560311 TBX22Q9Y458 520 aa9.67□□□□□ -0.86
IRF9-208ENST00000560311 IFT172Q9UG01 1749 aa9.67□□□□□ -0.86
IRF9-208ENST00000560311 MSH6P52701 1360 aa9.66□□□□□ -0.86
IRF9-208ENST00000560311 RBM33Q96EV2 1170 aaKnown RBP9.66□□□□□ -0.86
IRF9-208ENST00000560311 METP08581 1390 aa9.65□□□□□ -0.86
IRF9-208ENST00000560311 ROBO1Q9Y6N7 1651 aa9.65□□□□□ -0.86
IRF9-208ENST00000560311 ACIN1Q9UKV3 1341 aaKnown RBP9.65□□□□□ -0.86
IRF9-208ENST00000560311 HSPA1LP34931 641 aa9.65□□□□□ -0.86
IRF9-208ENST00000560311 PROSER2Q86WR7 435 aaPredicted RBP9.65□□□□□ -0.86
IRF9-208ENST00000560311 ZNF454Q8N9F8 522 aa9.65□□□□□ -0.86
IRF9-208ENST00000560311 PTCH1Q13635 1447 aa9.65□□□□□ -0.87
IRF9-208ENST00000560311 NCOA3Q9Y6Q9 1424 aa9.65□□□□□ -0.87
IRF9-208ENST00000560311 MED1Q15648 1581 aaPredicted RBP9.64□□□□□ -0.87
IRF9-208ENST00000560311 BHMG1C9JSJ3 638 aaPredicted RBP9.64□□□□□ -0.87
IRF9-208ENST00000560311 WNT2BQ93097 391 aa9.64□□□□□ -0.87
IRF9-208ENST00000560311 PRAG1Q86YV5 1406 aa9.64□□□□□ -0.87
IRF9-208ENST00000560311 RPGRIP1LQ68CZ1 1315 aa9.63□□□□□ -0.87
IRF9-208ENST00000560311 ASXL1Q8IXJ9 1541 aa9.63□□□□□ -0.87
IRF9-208ENST00000560311 NALCNQ8IZF0 1738 aa9.63□□□□□ -0.87
IRF9-208ENST00000560311 GOLGA8CPA6NN73 597 aa9.63□□□□□ -0.87
IRF9-208ENST00000560311 MYOM2P54296 1465 aa9.63□□□□□ -0.87
IRF9-208ENST00000560311 PIK3C2GO75747 1445 aa9.63□□□□□ -0.87
IRF9-208ENST00000560311 UPF1Q92900 1129 aaKnown RBP eCLIP9.62□□□□□ -0.87
IRF9-208ENST00000560311 SLC4A5Q9BY07 1137 aa9.62□□□□□ -0.87
IRF9-208ENST00000560311 BCL2L12Q9HB09 334 aa9.62□□□□□ -0.87
IRF9-208ENST00000560311 DCCP43146 1447 aa9.62□□□□□ -0.87
IRF9-208ENST00000560311 FAM135BQ49AJ0 1406 aa9.62□□□□□ -0.87
IRF9-208ENST00000560311 ADGRL3Q9HAR2 1447 aa9.62□□□□□ -0.87
IRF9-208ENST00000560311 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.62□□□□□ -0.87
IRF9-208ENST00000560311 DISP3Q9P2K9 1392 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms