RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 RREB1Q92766 1687 aa19.23■□□□□ 0.67
RABGGTA-213ENST00000560127 DHX57Q6P158 1386 aaKnown RBP19.22■□□□□ 0.67
RABGGTA-213ENST00000560127 NUP188Q5SRE5 1749 aa19.22■□□□□ 0.67
RABGGTA-213ENST00000560127 CFAP70Q5T0N1 1121 aa19.21■□□□□ 0.67
RABGGTA-213ENST00000560127 DLC1Q96QB1 1528 aa19.2■□□□□ 0.66
RABGGTA-213ENST00000560127 TRIM37O94972 964 aa19.2■□□□□ 0.66
RABGGTA-213ENST00000560127 YY1P25490 414 aa19.19■□□□□ 0.66
RABGGTA-213ENST00000560127 SPATA31A1Q5TZJ5 1347 aa19.18■□□□□ 0.66
RABGGTA-213ENST00000560127 ACIN1Q9UKV3 1341 aaKnown RBP19.18■□□□□ 0.66
RABGGTA-213ENST00000560127 GPRASP1Q5JY77 1395 aa19.18■□□□□ 0.66
RABGGTA-213ENST00000560127 PARD3Q8TEW0 1356 aa19.18■□□□□ 0.66
RABGGTA-213ENST00000560127 FAM196AQ6ZSG2 479 aa19.17■□□□□ 0.66
RABGGTA-213ENST00000560127 MPHOSPH9Q99550 1183 aa19.17■□□□□ 0.66
RABGGTA-213ENST00000560127 POGKQ9P215 609 aa19.17■□□□□ 0.66
RABGGTA-213ENST00000560127 PRR36Q9H6K5 1346 aa19.17■□□□□ 0.66
RABGGTA-213ENST00000560127 PRDM11Q9NQV5 511 aa19.16■□□□□ 0.66
RABGGTA-213ENST00000560127 PHRF1Q9P1Y6 1649 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-213ENST00000560127 APBA3O96018 575 aa19.15■□□□□ 0.66
RABGGTA-213ENST00000560127 HIRIP3Q9BW71 556 aaPredicted RBP19.14■□□□□ 0.65
RABGGTA-213ENST00000560127 TULP4Q9NRJ4 1543 aa19.14■□□□□ 0.65
RABGGTA-213ENST00000560127 ADGRB1O14514 1584 aa19.13■□□□□ 0.65
RABGGTA-213ENST00000560127 KIAA0232Q92628 1395 aa19.12■□□□□ 0.65
RABGGTA-213ENST00000560127 PAK3O75914 559 aaPredicted RBP19.11■□□□□ 0.65
RABGGTA-213ENST00000560127 CHRNA2Q15822 529 aa19.11■□□□□ 0.65
RABGGTA-213ENST00000560127 ITSN1Q15811 1721 aa19.11■□□□□ 0.65
RABGGTA-213ENST00000560127 UTRNP46939 3433 aa19.1■□□□□ 0.65
RABGGTA-213ENST00000560127 EIF3AQ14152 1382 aaKnown RBP19.1■□□□□ 0.65
RABGGTA-213ENST00000560127 MINK1Q8N4C8 1332 aaPredicted RBP19.1■□□□□ 0.65
RABGGTA-213ENST00000560127 STRN4Q9NRL3 753 aa19.1■□□□□ 0.65
RABGGTA-213ENST00000560127 NGDNQ8NEJ9 315 aaKnown RBP19.09■□□□□ 0.65
RABGGTA-213ENST00000560127 TRAK1Q9UPV9 953 aa19.09■□□□□ 0.65
RABGGTA-213ENST00000560127 CAMTA1Q9Y6Y1 1673 aa19.08■□□□□ 0.65
RABGGTA-213ENST00000560127 WASLO00401 505 aaPredicted RBP19.08■□□□□ 0.64
RABGGTA-213ENST00000560127 NBPF8Q3BBV2 869 aa19.08■□□□□ 0.64
RABGGTA-213ENST00000560127 NBPF14Q5TI25 921 aa19.08■□□□□ 0.64
RABGGTA-213ENST00000560127 BARGINQ6ZT62 677 aa19.07■□□□□ 0.64
RABGGTA-213ENST00000560127 USP35Q9P2H5 1018 aa19.07■□□□□ 0.64
RABGGTA-213ENST00000560127 SBF2Q86WG5 1849 aa19.07■□□□□ 0.64
RABGGTA-213ENST00000560127 PDE3BQ13370 1112 aa19.06■□□□□ 0.64
RABGGTA-213ENST00000560127 SPON1Q9HCB6 807 aa19.06■□□□□ 0.64
RABGGTA-213ENST00000560127 ZC3H6P61129 1189 aaKnown RBP19.05■□□□□ 0.64
RABGGTA-213ENST00000560127 PPP1R1BQ9UD71 204 aaPredicted RBP19.05■□□□□ 0.64
RABGGTA-213ENST00000560127 SSH2Q76I76 1423 aa19.05■□□□□ 0.64
RABGGTA-213ENST00000560127 NINLQ9Y2I6 1382 aa19.05■□□□□ 0.64
RABGGTA-213ENST00000560127 KCNQ2O43526 872 aa19.04■□□□□ 0.64
RABGGTA-213ENST00000560127 PARP4Q9UKK3 1724 aaKnown RBP19.04■□□□□ 0.64
RABGGTA-213ENST00000560127 LMO7Q8WWI1 1683 aa19.04■□□□□ 0.64
RABGGTA-213ENST00000560127 ATP7BP35670 1465 aa19.03■□□□□ 0.64
RABGGTA-213ENST00000560127 RGPD3A6NKT7 1758 aaPredicted RBP19.03■□□□□ 0.64
RABGGTA-213ENST00000560127 RGPD4Q7Z3J3 1758 aa19.03■□□□□ 0.64
RABGGTA-213ENST00000560127 ARHGEF28Q8N1W1 1705 aaKnown RBP19.03■□□□□ 0.64
RABGGTA-213ENST00000560127 NRKQ7Z2Y5 1582 aa19.02■□□□□ 0.64
RABGGTA-213ENST00000560127 CASZ1Q86V15 1759 aa19.02■□□□□ 0.64
RABGGTA-213ENST00000560127 EVA1CP58658 441 aa19.02■□□□□ 0.64
RABGGTA-213ENST00000560127 NUTM2GQ5VZR2 741 aa19.02■□□□□ 0.64
RABGGTA-213ENST00000560127 PEAK1Q9H792 1746 aa19.01■□□□□ 0.63
RABGGTA-213ENST00000560127 LARP1Q6PKG0 1096 aaKnown RBP19.01■□□□□ 0.63
RABGGTA-213ENST00000560127 DCAF8L1A6NGE4 600 aa19■□□□□ 0.63
RABGGTA-213ENST00000560127 TCP11L2Q8N4U5 519 aa19■□□□□ 0.63
RABGGTA-213ENST00000560127 TOPAZ1Q8N9V7 1692 aa19■□□□□ 0.63
RABGGTA-213ENST00000560127 NUDT16Q96DE0 195 aaKnown RBP18.99■□□□□ 0.63
RABGGTA-213ENST00000560127 CHD4Q14839 1912 aa18.99■□□□□ 0.63
RABGGTA-213ENST00000560127 CPDO75976 1380 aa18.96■□□□□ 0.63
RABGGTA-213ENST00000560127 POLR3AO14802 1390 aaPredicted RBP18.95■□□□□ 0.62
RABGGTA-213ENST00000560127 THRAP3Q9Y2W1 955 aaKnown RBP18.95■□□□□ 0.62
RABGGTA-213ENST00000560127 MYOM1P52179 1685 aa18.95■□□□□ 0.62
RABGGTA-213ENST00000560127 ANO8Q9HCE9 1232 aaPredicted RBP18.94■□□□□ 0.62
RABGGTA-213ENST00000560127 ACEP12821 1306 aa18.94■□□□□ 0.62
RABGGTA-213ENST00000560127 LRRC37A3O60309 1634 aa18.93■□□□□ 0.62
RABGGTA-213ENST00000560127 COL5A2P05997 1499 aaPredicted RBP18.93■□□□□ 0.62
RABGGTA-213ENST00000560127 KDM2AQ9Y2K7 1162 aa18.93■□□□□ 0.62
RABGGTA-213ENST00000560127 USP19O94966 1318 aa18.93■□□□□ 0.62
RABGGTA-213ENST00000560127 OVOS2A0A0G2JMS6 1433 aa18.92■□□□□ 0.62
RABGGTA-213ENST00000560127 OVOS2A0A0J9YW53 1432 aa18.92■□□□□ 0.62
RABGGTA-213ENST00000560127 OVOS2Q6IE36 1432 aa18.92■□□□□ 0.62
RABGGTA-213ENST00000560127 PLSCR1O15162 318 aa18.92■□□□□ 0.62
RABGGTA-213ENST00000560127 CDK19Q9BWU1 502 aa18.92■□□□□ 0.62
RABGGTA-213ENST00000560127 PDGFDQ9GZP0 370 aaPredicted RBP18.92■□□□□ 0.62
RABGGTA-213ENST00000560127 WNK3Q9BYP7 1800 aa18.92■□□□□ 0.62
RABGGTA-213ENST00000560127 C11orf95C9JLR9 678 aaPredicted RBP18.91■□□□□ 0.62
RABGGTA-213ENST00000560127 ABTB2Q8N961 1025 aa18.91■□□□□ 0.62
RABGGTA-213ENST00000560127 ZNF784Q8NCA9 323 aaPredicted RBP18.91■□□□□ 0.62
RABGGTA-213ENST00000560127 AKAP12Q02952 1782 aa18.91■□□□□ 0.62
RABGGTA-213ENST00000560127 PTF1AQ7RTS3 328 aa18.9■□□□□ 0.62
RABGGTA-213ENST00000560127 DCAF11Q8TEB1 546 aa18.9■□□□□ 0.62
RABGGTA-213ENST00000560127 PLEKHG3A1L390 1219 aa18.89■□□□□ 0.61
RABGGTA-213ENST00000560127 CRB1P82279 1406 aa18.89■□□□□ 0.61
RABGGTA-213ENST00000560127 CCDC61Q9Y6R9 512 aa18.88■□□□□ 0.61
RABGGTA-213ENST00000560127 ZBTB7AO95365 584 aa18.87■□□□□ 0.61
RABGGTA-213ENST00000560127 GCP02774 474 aa18.87■□□□□ 0.61
RABGGTA-213ENST00000560127 COL18A1P39060 1754 aa18.87■□□□□ 0.61
RABGGTA-213ENST00000560127 PTGER2P43116 358 aa18.87■□□□□ 0.61
RABGGTA-213ENST00000560127 PROM2Q8N271 834 aa18.87■□□□□ 0.61
RABGGTA-213ENST00000560127 BCL11BQ9C0K0 894 aaPredicted RBP18.86■□□□□ 0.61
RABGGTA-213ENST00000560127 NLRP13Q86W25 1043 aa18.85■□□□□ 0.61
RABGGTA-213ENST00000560127 RGPD5Q99666 1765 aa18.85■□□□□ 0.61
RABGGTA-213ENST00000560127 CEP350Q5VT06 3117 aa18.84■□□□□ 0.61
RABGGTA-213ENST00000560127 DDB1Q16531 1140 aa18.84■□□□□ 0.61
RABGGTA-213ENST00000560127 ATF5Q9Y2D1 282 aaPredicted RBP18.84■□□□□ 0.61
RABGGTA-213ENST00000560127 GOLGB1Q14789 3259 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms