RNA–Protein interactions for RNA: ENST00000559663.1

CDK12-205, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-205ENST00000559663 TULP4Q9NRJ4 1543 aa12.05□□□□□ -0.48
CDK12-205ENST00000559663 TRAK1Q9UPV9 953 aa12.04□□□□□ -0.48
CDK12-205ENST00000559663 COL14A1Q05707 1796 aaKnown RBP12.04□□□□□ -0.48
CDK12-205ENST00000559663 RGPD8O14715 1765 aaPredicted RBP12.03□□□□□ -0.48
CDK12-205ENST00000559663 WASLO00401 505 aaPredicted RBP12.03□□□□□ -0.48
CDK12-205ENST00000559663 FAM182BQ5T319 152 aa12.03□□□□□ -0.48
CDK12-205ENST00000559663 MINK1Q8N4C8 1332 aaPredicted RBP12.03□□□□□ -0.48
CDK12-205ENST00000559663 ALS2Q96Q42 1657 aa12.03□□□□□ -0.48
CDK12-205ENST00000559663 R3HDM1Q15032 1099 aaKnown RBP12.02□□□□□ -0.49
CDK12-205ENST00000559663 PRDM11Q9NQV5 511 aa12.02□□□□□ -0.49
CDK12-205ENST00000559663 THSD7AQ9UPZ6 1657 aa12.02□□□□□ -0.49
CDK12-205ENST00000559663 NGDNQ8NEJ9 315 aaKnown RBP12.01□□□□□ -0.49
CDK12-205ENST00000559663 SPATA31A1Q5TZJ5 1347 aa12.01□□□□□ -0.49
CDK12-205ENST00000559663 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
CDK12-205ENST00000559663 KIAA0232Q92628 1395 aa12□□□□□ -0.49
CDK12-205ENST00000559663 RGPD1P0DJD0 1748 aa12□□□□□ -0.49
CDK12-205ENST00000559663 EZH2Q15910 746 aaKnown RBP11.99□□□□□ -0.49
CDK12-205ENST00000559663 CAMKK2Q96RR4 588 aa11.99□□□□□ -0.49
CDK12-205ENST00000559663 ATP7BP35670 1465 aa11.99□□□□□ -0.49
CDK12-205ENST00000559663 CRYBG1Q9Y4K1 1723 aa11.98□□□□□ -0.49
CDK12-205ENST00000559663 PARD3Q8TEW0 1356 aa11.98□□□□□ -0.49
CDK12-205ENST00000559663 FAM196AQ6ZSG2 479 aa11.98□□□□□ -0.49
CDK12-205ENST00000559663 RAB3GAP2Q9H2M9 1393 aa11.97□□□□□ -0.49
CDK12-205ENST00000559663 TRIM37O94972 964 aa11.97□□□□□ -0.49
CDK12-205ENST00000559663 CHRNA2Q15822 529 aa11.97□□□□□ -0.49
CDK12-205ENST00000559663 NUDT16Q96DE0 195 aaKnown RBP11.97□□□□□ -0.49
CDK12-205ENST00000559663 STAC3Q96MF2 364 aa11.97□□□□□ -0.49
CDK12-205ENST00000559663 TNS1Q9HBL0 1735 aaKnown RBP11.97□□□□□ -0.49
CDK12-205ENST00000559663 DCAF11Q8TEB1 546 aa11.96□□□□□ -0.49
CDK12-205ENST00000559663 STRN4Q9NRL3 753 aa11.96□□□□□ -0.49
CDK12-205ENST00000559663 KDM2AQ9Y2K7 1162 aa11.96□□□□□ -0.49
CDK12-205ENST00000559663 SSH2Q76I76 1423 aa11.95□□□□□ -0.5
CDK12-205ENST00000559663 APBA3O96018 575 aa11.95□□□□□ -0.5
CDK12-205ENST00000559663 ZC3H6P61129 1189 aaKnown RBP11.95□□□□□ -0.5
CDK12-205ENST00000559663 BARGINQ6ZT62 677 aa11.95□□□□□ -0.5
CDK12-205ENST00000559663 POLR3AO14802 1390 aaPredicted RBP11.94□□□□□ -0.5
CDK12-205ENST00000559663 USP35Q9P2H5 1018 aa11.93□□□□□ -0.5
CDK12-205ENST00000559663 PHRF1Q9P1Y6 1649 aaKnown RBP11.93□□□□□ -0.5
CDK12-205ENST00000559663 CPDO75976 1380 aa11.92□□□□□ -0.5
CDK12-205ENST00000559663 ACEP12821 1306 aa11.92□□□□□ -0.5
CDK12-205ENST00000559663 PDE3BQ13370 1112 aa11.92□□□□□ -0.5
CDK12-205ENST00000559663 NBPF8Q3BBV2 869 aa11.92□□□□□ -0.5
CDK12-205ENST00000559663 NUTM2GQ5VZR2 741 aa11.92□□□□□ -0.5
CDK12-205ENST00000559663 CDK19Q9BWU1 502 aa11.92□□□□□ -0.5
CDK12-205ENST00000559663 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
CDK12-205ENST00000559663 USP19O94966 1318 aa11.91□□□□□ -0.5
CDK12-205ENST00000559663 PLEKHG3A1L390 1219 aa11.91□□□□□ -0.5
CDK12-205ENST00000559663 EVA1CP58658 441 aa11.91□□□□□ -0.5
CDK12-205ENST00000559663 LARP1Q6PKG0 1096 aaKnown RBP11.91□□□□□ -0.5
CDK12-205ENST00000559663 TCP11L2Q8N4U5 519 aa11.91□□□□□ -0.5
CDK12-205ENST00000559663 NRKQ7Z2Y5 1582 aa11.91□□□□□ -0.5
CDK12-205ENST00000559663 CAMTA1Q9Y6Y1 1673 aa11.91□□□□□ -0.5
CDK12-205ENST00000559663 ITSN1Q15811 1721 aa11.9□□□□□ -0.5
CDK12-205ENST00000559663 NBPF14Q5TI25 921 aa11.9□□□□□ -0.5
CDK12-205ENST00000559663 ARHGEF28Q8N1W1 1705 aaKnown RBP11.9□□□□□ -0.5
CDK12-205ENST00000559663 THRAP3Q9Y2W1 955 aaKnown RBP11.9□□□□□ -0.5
CDK12-205ENST00000559663 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
CDK12-205ENST00000559663 UTRNP46939 3433 aa11.88□□□□□ -0.51
CDK12-205ENST00000559663 TOPAZ1Q8N9V7 1692 aa11.88□□□□□ -0.51
CDK12-205ENST00000559663 LMO7Q8WWI1 1683 aa11.88□□□□□ -0.51
CDK12-205ENST00000559663 RREB1Q92766 1687 aa11.88□□□□□ -0.51
CDK12-205ENST00000559663 COL5A2P05997 1499 aaPredicted RBP11.88□□□□□ -0.51
CDK12-205ENST00000559663 C11orf95C9JLR9 678 aaPredicted RBP11.87□□□□□ -0.51
CDK12-205ENST00000559663 GCP02774 474 aa11.87□□□□□ -0.51
CDK12-205ENST00000559663 NUP188Q5SRE5 1749 aa11.86□□□□□ -0.51
CDK12-205ENST00000559663 YY1P25490 414 aa11.86□□□□□ -0.51
CDK12-205ENST00000559663 NLRP13Q86W25 1043 aa11.86□□□□□ -0.51
CDK12-205ENST00000559663 SPON1Q9HCB6 807 aa11.86□□□□□ -0.51
CDK12-205ENST00000559663 BRD4O60885 1362 aaPredicted RBP11.86□□□□□ -0.51
CDK12-205ENST00000559663 OVOS2A0A0G2JMS6 1433 aa11.86□□□□□ -0.51
CDK12-205ENST00000559663 OVOS2A0A0J9YW53 1432 aa11.86□□□□□ -0.51
CDK12-205ENST00000559663 CRB1P82279 1406 aa11.86□□□□□ -0.51
CDK12-205ENST00000559663 OVOS2Q6IE36 1432 aa11.86□□□□□ -0.51
CDK12-205ENST00000559663 PPIP5K1Q6PFW1 1433 aa11.86□□□□□ -0.51
CDK12-205ENST00000559663 NINLQ9Y2I6 1382 aa11.85□□□□□ -0.51
CDK12-205ENST00000559663 KCNQ2O43526 872 aa11.84□□□□□ -0.51
CDK12-205ENST00000559663 PPP1R1BQ9UD71 204 aaPredicted RBP11.84□□□□□ -0.51
CDK12-205ENST00000559663 AATKQ6ZMQ8 1374 aa11.83□□□□□ -0.52
CDK12-205ENST00000559663 PLSCR1O15162 318 aa11.83□□□□□ -0.52
CDK12-205ENST00000559663 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
CDK12-205ENST00000559663 NBPF1Q3BBV0 1214 aa11.83□□□□□ -0.52
CDK12-205ENST00000559663 CENPJQ9HC77 1338 aaPredicted RBP11.83□□□□□ -0.52
CDK12-205ENST00000559663 PARP4Q9UKK3 1724 aaKnown RBP11.83□□□□□ -0.52
CDK12-205ENST00000559663 ANO8Q9HCE9 1232 aaPredicted RBP11.82□□□□□ -0.52
CDK12-205ENST00000559663 CABP2Q9NPB3 220 aa11.82□□□□□ -0.52
CDK12-205ENST00000559663 SLIT3O75094 1523 aa11.81□□□□□ -0.52
CDK12-205ENST00000559663 PEAK1Q9H792 1746 aa11.81□□□□□ -0.52
CDK12-205ENST00000559663 USP6P35125 1406 aa11.81□□□□□ -0.52
CDK12-205ENST00000559663 DDB1Q16531 1140 aa11.81□□□□□ -0.52
CDK12-205ENST00000559663 KIAA1210Q9ULL0 1709 aa11.8□□□□□ -0.52
CDK12-205ENST00000559663 BCL9O00512 1426 aa11.8□□□□□ -0.52
CDK12-205ENST00000559663 ZBTB7CA1YPR0 619 aa11.8□□□□□ -0.52
CDK12-205ENST00000559663 NLRP6P59044 892 aa11.8□□□□□ -0.52
CDK12-205ENST00000559663 BCL11BQ9C0K0 894 aaPredicted RBP11.8□□□□□ -0.52
CDK12-205ENST00000559663 LRRC37A3O60309 1634 aa11.79□□□□□ -0.52
CDK12-205ENST00000559663 DCAF8L1A6NGE4 600 aa11.79□□□□□ -0.52
CDK12-205ENST00000559663 TOM1L2Q6ZVM7 507 aa11.79□□□□□ -0.52
CDK12-205ENST00000559663 CDCA7Q9BWT1 371 aaPredicted RBP11.79□□□□□ -0.52
CDK12-205ENST00000559663 CABP1Q9NZU7 370 aa11.79□□□□□ -0.52
CDK12-205ENST00000559663 WDR17Q8IZU2 1322 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms