RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 TSC1Q92574 1164 aa9.19□□□□□ -0.94
CASC4-207ENST00000559037 WNT7BP56706 349 aa9.18□□□□□ -0.94
CASC4-207ENST00000559037 TMEM259Q4ZIN3 620 aa9.18□□□□□ -0.94
CASC4-207ENST00000559037 LAMC3Q9Y6N6 1575 aa9.17□□□□□ -0.94
CASC4-207ENST00000559037 F12P00748 615 aaPredicted RBP9.17□□□□□ -0.94
CASC4-207ENST00000559037 PRR20EP86478 221 aa9.17□□□□□ -0.94
CASC4-207ENST00000559037 PRR20CP86479 221 aa9.17□□□□□ -0.94
CASC4-207ENST00000559037 PRR20DP86480 221 aa9.17□□□□□ -0.94
CASC4-207ENST00000559037 PRR20BP86481 221 aa9.17□□□□□ -0.94
CASC4-207ENST00000559037 PRR20AP86496 221 aa9.17□□□□□ -0.94
CASC4-207ENST00000559037 ERCC6Q03468 1493 aa9.16□□□□□ -0.94
CASC4-207ENST00000559037 RFC5P40937 340 aa9.16□□□□□ -0.94
CASC4-207ENST00000559037 ARMC2Q8NEN0 867 aa9.16□□□□□ -0.94
CASC4-207ENST00000559037 UNC93B1Q9H1C4 597 aa9.16□□□□□ -0.94
CASC4-207ENST00000559037 RSF1Q96T23 1441 aaPredicted RBP9.15□□□□□ -0.94
CASC4-207ENST00000559037 CTHP32929 405 aa9.15□□□□□ -0.94
CASC4-207ENST00000559037 CUX2O14529 1486 aa9.15□□□□□ -0.95
CASC4-207ENST00000559037 KIF21AQ7Z4S6 1674 aa9.14□□□□□ -0.95
CASC4-207ENST00000559037 SOCS7O14512 581 aa9.14□□□□□ -0.95
CASC4-207ENST00000559037 WNT7AO00755 349 aa9.13□□□□□ -0.95
CASC4-207ENST00000559037 NRG2O14511 850 aaPredicted RBP9.13□□□□□ -0.95
CASC4-207ENST00000559037 PER1O15534 1290 aaPredicted RBP9.13□□□□□ -0.95
CASC4-207ENST00000559037 PNMA1Q8ND90 353 aa9.13□□□□□ -0.95
CASC4-207ENST00000559037 AP1G2O75843 785 aa9.12□□□□□ -0.95
CASC4-207ENST00000559037 CTDSPL2Q05D32 466 aa9.12□□□□□ -0.95
CASC4-207ENST00000559037 NBPF14Q5TI25 921 aa9.12□□□□□ -0.95
CASC4-207ENST00000559037 PTCRAQ6ISU1 281 aaPredicted RBP9.12□□□□□ -0.95
CASC4-207ENST00000559037 BANK1Q8NDB2 785 aa9.12□□□□□ -0.95
CASC4-207ENST00000559037 GPKOWQ92917 476 aaPredicted RBP eCLIP9.12□□□□□ -0.95
CASC4-207ENST00000559037 PDZRN3Q9UPQ7 1066 aa9.12□□□□□ -0.95
CASC4-207ENST00000559037 CADPSQ9ULU8 1353 aa9.12□□□□□ -0.95
CASC4-207ENST00000559037 ZC3H4Q9UPT8 1303 aaKnown RBP9.11□□□□□ -0.95
CASC4-207ENST00000559037 GDF9O60383 454 aa9.11□□□□□ -0.95
CASC4-207ENST00000559037 USP17L8P0C7I0 530 aa9.11□□□□□ -0.95
CASC4-207ENST00000559037 APBB1O00213 710 aa9.1□□□□□ -0.95
CASC4-207ENST00000559037 GFRA3O60609 400 aa9.1□□□□□ -0.95
CASC4-207ENST00000559037 FBXO31Q5XUX0 539 aaPredicted RBP9.1□□□□□ -0.95
CASC4-207ENST00000559037 MAP10Q9P2G4 905 aa9.1□□□□□ -0.95
CASC4-207ENST00000559037 THOC2Q8NI27 1593 aaKnown RBP9.1□□□□□ -0.95
CASC4-207ENST00000559037 PDS5BQ9NTI5 1447 aa9.09□□□□□ -0.95
CASC4-207ENST00000559037 TMEM132AQ24JP5 1023 aa9.09□□□□□ -0.95
CASC4-207ENST00000559037 ZNF511Q8NB15 262 aa9.09□□□□□ -0.95
CASC4-207ENST00000559037 PKD2L1Q9P0L9 805 aa9.09□□□□□ -0.95
CASC4-207ENST00000559037 TRIM67Q6ZTA4 783 aa9.08□□□□□ -0.96
CASC4-207ENST00000559037 TOP2AP11388 1531 aaKnown RBP9.07□□□□□ -0.96
CASC4-207ENST00000559037 SH3BP2P78314 561 aa9.07□□□□□ -0.96
CASC4-207ENST00000559037 SKOR1P84550 965 aa9.07□□□□□ -0.96
CASC4-207ENST00000559037 RC3H1Q5TC82 1133 aaKnown RBP9.07□□□□□ -0.96
CASC4-207ENST00000559037 FOXC1Q12948 553 aa9.06□□□□□ -0.96
CASC4-207ENST00000559037 LRRN4Q8WUT4 740 aa9.06□□□□□ -0.96
CASC4-207ENST00000559037 BAP1Q92560 729 aa9.06□□□□□ -0.96
CASC4-207ENST00000559037 VARSP26640 1264 aaKnown RBP9.05□□□□□ -0.96
CASC4-207ENST00000559037 BPHLQ86WA6 291 aaPredicted RBP9.05□□□□□ -0.96
CASC4-207ENST00000559037 CYP4X1Q8N118 509 aa9.05□□□□□ -0.96
CASC4-207ENST00000559037 EHBP1Q8NDI1 1231 aa9.05□□□□□ -0.96
CASC4-207ENST00000559037 SNIP1Q8TAD8 396 aaKnown RBP9.05□□□□□ -0.96
CASC4-207ENST00000559037 FKBPLQ9UIM3 349 aa9.05□□□□□ -0.96
CASC4-207ENST00000559037 TNFRSF10AO00220 468 aa9.04□□□□□ -0.96
CASC4-207ENST00000559037 MPNDQ8N594 471 aa9.04□□□□□ -0.96
CASC4-207ENST00000559037 MRGPRX2Q96LB1 330 aa9.04□□□□□ -0.96
CASC4-207ENST00000559037 TOR4AQ9NXH8 423 aa9.04□□□□□ -0.96
CASC4-207ENST00000559037 GPSM3Q9Y4H4 160 aa9.04□□□□□ -0.96
CASC4-207ENST00000559037 PRDM2Q13029 1718 aa9.04□□□□□ -0.96
CASC4-207ENST00000559037 CFTRP13569 1480 aa9.03□□□□□ -0.96
CASC4-207ENST00000559037 DGAT1O75907 488 aa9.03□□□□□ -0.96
CASC4-207ENST00000559037 LINC01559Q495D7 138 aa9.03□□□□□ -0.96
CASC4-207ENST00000559037 PDXDC2PQ6P474 469 aa9.03□□□□□ -0.96
CASC4-207ENST00000559037 TTC24A2A3L6 582 aaPredicted RBP9.02□□□□□ -0.97
CASC4-207ENST00000559037 FAM174AQ8TBP5 190 aa9.02□□□□□ -0.97
CASC4-207ENST00000559037 NR6A1Q15406 480 aa9.01□□□□□ -0.97
CASC4-207ENST00000559037 PKDCCQ504Y2 493 aa9.01□□□□□ -0.97
CASC4-207ENST00000559037 Q6ZNB5 142 aa9.01□□□□□ -0.97
CASC4-207ENST00000559037 SH3BP5LQ7L8J4 393 aa9□□□□□ -0.97
CASC4-207ENST00000559037 SH3RF1Q7Z6J0 888 aa9□□□□□ -0.97
CASC4-207ENST00000559037 PRM3Q9NNZ6 103 aa9□□□□□ -0.97
CASC4-207ENST00000559037 HMX1Q9NP08 348 aaPredicted RBP9□□□□□ -0.97
CASC4-207ENST00000559037 CCDC88BA6NC98 1476 aa9□□□□□ -0.97
CASC4-207ENST00000559037 MRC2Q9UBG0 1479 aa9□□□□□ -0.97
CASC4-207ENST00000559037 SIAH2O43255 324 aa8.99□□□□□ -0.97
CASC4-207ENST00000559037 AGERQ15109 404 aa8.99□□□□□ -0.97
CASC4-207ENST00000559037 C1QTNF2Q9BXJ5 285 aa8.99□□□□□ -0.97
CASC4-207ENST00000559037 FANCD2Q9BXW9 1451 aa8.99□□□□□ -0.97
CASC4-207ENST00000559037 WDR62O43379 1518 aa8.99□□□□□ -0.97
CASC4-207ENST00000559037 PTK2Q05397 1052 aa8.98□□□□□ -0.97
CASC4-207ENST00000559037 TRMT44Q8IYL2 757 aaKnown RBP8.98□□□□□ -0.97
CASC4-207ENST00000559037 FOXJ1Q92949 421 aa8.98□□□□□ -0.97
CASC4-207ENST00000559037 GJD4Q96KN9 370 aaPredicted RBP8.98□□□□□ -0.97
CASC4-207ENST00000559037 TRIM34Q9BYJ4 488 aa8.98□□□□□ -0.97
CASC4-207ENST00000559037 CEP164Q9UPV0 1460 aa8.97□□□□□ -0.97
CASC4-207ENST00000559037 FAM187AA6NFU0 413 aa8.97□□□□□ -0.97
CASC4-207ENST00000559037 MTMR14Q8NCE2 650 aa8.97□□□□□ -0.97
CASC4-207ENST00000559037 CDK15Q96Q40 435 aa8.97□□□□□ -0.97
CASC4-207ENST00000559037 ARHGAP9Q9BRR9 750 aa8.97□□□□□ -0.97
CASC4-207ENST00000559037 CDV3Q9UKY7 258 aaKnown RBP8.97□□□□□ -0.97
CASC4-207ENST00000559037 NDUFB9Q9Y6M9 179 aa8.97□□□□□ -0.97
CASC4-207ENST00000559037 AVPP01185 164 aa8.96□□□□□ -0.98
CASC4-207ENST00000559037 CTC1Q2NKJ3 1217 aa8.96□□□□□ -0.98
CASC4-207ENST00000559037 ZNF592Q92610 1267 aa8.96□□□□□ -0.98
CASC4-207ENST00000559037 MAP4K5Q9Y4K4 846 aa8.96□□□□□ -0.98
CASC4-207ENST00000559037 LCE2BO14633 110 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms