RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 NDUFB9Q9Y6M9 179 aa10.46□□□□□ -0.73
LRRC28-209ENST00000558861 PDS5BQ9NTI5 1447 aa10.46□□□□□ -0.74
LRRC28-209ENST00000558861 JUNDP17535 347 aa10.45□□□□□ -0.74
LRRC28-209ENST00000558861 NR6A1Q15406 480 aa10.45□□□□□ -0.74
LRRC28-209ENST00000558861 MSS51Q4VC12 460 aa10.45□□□□□ -0.74
LRRC28-209ENST00000558861 LYPD8Q6UX82 237 aa10.45□□□□□ -0.74
LRRC28-209ENST00000558861 FANCD2Q9BXW9 1451 aa10.43□□□□□ -0.74
LRRC28-209ENST00000558861 ADH1BP00325 375 aa10.43□□□□□ -0.74
LRRC28-209ENST00000558861 SPNS2Q8IVW8 549 aa10.43□□□□□ -0.74
LRRC28-209ENST00000558861 RNF166Q96A37 237 aaPredicted RBP10.43□□□□□ -0.74
LRRC28-209ENST00000558861 IL21Q9HBE4 155 aa10.43□□□□□ -0.74
LRRC28-209ENST00000558861 PRM3Q9NNZ6 103 aa10.43□□□□□ -0.74
LRRC28-209ENST00000558861 DXOO77932 396 aaKnown RBP10.42□□□□□ -0.74
LRRC28-209ENST00000558861 IRF5Q13568 498 aa10.41□□□□□ -0.74
LRRC28-209ENST00000558861 PTPRNQ16849 979 aa10.41□□□□□ -0.74
LRRC28-209ENST00000558861 MAP10Q9P2G4 905 aa10.41□□□□□ -0.74
LRRC28-209ENST00000558861 ZNF777Q9ULD5 760 aaPredicted RBP10.41□□□□□ -0.74
LRRC28-209ENST00000558861 F12P00748 615 aaPredicted RBP10.4□□□□□ -0.74
LRRC28-209ENST00000558861 MMP16P51512 607 aa10.4□□□□□ -0.74
LRRC28-209ENST00000558861 ZNF330Q9Y3S2 320 aaPredicted RBP10.4□□□□□ -0.74
LRRC28-209ENST00000558861 ERCC6Q03468 1493 aa10.4□□□□□ -0.74
LRRC28-209ENST00000558861 KIF21AQ7Z4S6 1674 aa10.4□□□□□ -0.74
LRRC28-209ENST00000558861 THOC2Q8NI27 1593 aaKnown RBP10.39□□□□□ -0.75
LRRC28-209ENST00000558861 NKX2-3Q8TAU0 364 aa10.39□□□□□ -0.75
LRRC28-209ENST00000558861 CEP164Q9UPV0 1460 aa10.38□□□□□ -0.75
LRRC28-209ENST00000558861 HCSTQ9UBK5 93 aa10.38□□□□□ -0.75
LRRC28-209ENST00000558861 POM121CA8CG34 1229 aa10.37□□□□□ -0.75
LRRC28-209ENST00000558861 CCNYL3P0C7X3 344 aa10.37□□□□□ -0.75
LRRC28-209ENST00000558861 PRDM2Q13029 1718 aa10.37□□□□□ -0.75
LRRC28-209ENST00000558861 NUDT12Q9BQG2 462 aa10.37□□□□□ -0.75
LRRC28-209ENST00000558861 MRC2Q9UBG0 1479 aa10.36□□□□□ -0.75
LRRC28-209ENST00000558861 CTHP32929 405 aa10.36□□□□□ -0.75
LRRC28-209ENST00000558861 WWC1Q8IX03 1113 aa10.36□□□□□ -0.75
LRRC28-209ENST00000558861 ARID3AQ99856 593 aa10.36□□□□□ -0.75
LRRC28-209ENST00000558861 SLC6A16Q9GZN6 736 aa10.36□□□□□ -0.75
LRRC28-209ENST00000558861 URB2Q14146 1524 aaKnown RBP10.35□□□□□ -0.75
LRRC28-209ENST00000558861 S1PR4O95977 384 aa10.35□□□□□ -0.75
LRRC28-209ENST00000558861 WDR62O43379 1518 aa10.34□□□□□ -0.75
LRRC28-209ENST00000558861 CCDC82Q8N4S0 544 aa10.34□□□□□ -0.75
LRRC28-209ENST00000558861 VAC14Q08AM6 782 aa10.33□□□□□ -0.76
LRRC28-209ENST00000558861 EVA1BQ9NVM1 165 aa10.33□□□□□ -0.76
LRRC28-209ENST00000558861 KCNH2Q12809 1159 aa10.32□□□□□ -0.76
LRRC28-209ENST00000558861 FKBPLQ9UIM3 349 aa10.32□□□□□ -0.76
LRRC28-209ENST00000558861 CUX2O14529 1486 aa10.31□□□□□ -0.76
LRRC28-209ENST00000558861 ITGBL1O95965 494 aaPredicted RBP10.31□□□□□ -0.76
LRRC28-209ENST00000558861 CCDC24Q8N4L8 307 aa10.31□□□□□ -0.76
LRRC28-209ENST00000558861 KCNC4Q03721 635 aa10.3□□□□□ -0.76
LRRC28-209ENST00000558861 WASHC4Q2M389 1173 aa10.3□□□□□ -0.76
LRRC28-209ENST00000558861 PNMA1Q8ND90 353 aa10.3□□□□□ -0.76
LRRC28-209ENST00000558861 GLMNQ92990 594 aa10.3□□□□□ -0.76
LRRC28-209ENST00000558861 TOPBP1Q92547 1522 aa10.29□□□□□ -0.76
LRRC28-209ENST00000558861 PTCRAQ6ISU1 281 aaPredicted RBP10.29□□□□□ -0.76
LRRC28-209ENST00000558861 ADAMTS19Q8TE59 1207 aa10.29□□□□□ -0.76
LRRC28-209ENST00000558861 FCF1Q9Y324 198 aaKnown RBP10.29□□□□□ -0.76
LRRC28-209ENST00000558861 CUX1P39880 1505 aa10.28□□□□□ -0.76
LRRC28-209ENST00000558861 DNMBPQ6XZF7 1577 aa10.27□□□□□ -0.76
LRRC28-209ENST00000558861 FBXO45P0C2W1 286 aa10.27□□□□□ -0.77
LRRC28-209ENST00000558861 MMRN1Q13201 1228 aa10.27□□□□□ -0.77
LRRC28-209ENST00000558861 CALR3Q96L12 384 aaKnown RBP10.27□□□□□ -0.77
LRRC28-209ENST00000558861 UNC93B1Q9H1C4 597 aa10.27□□□□□ -0.77
LRRC28-209ENST00000558861 PPEF1O14829 653 aaPredicted RBP10.26□□□□□ -0.77
LRRC28-209ENST00000558861 ZC3H4Q9UPT8 1303 aaKnown RBP10.26□□□□□ -0.77
LRRC28-209ENST00000558861 ABCC8Q09428 1581 aa10.26□□□□□ -0.77
LRRC28-209ENST00000558861 CCDC97Q96F63 343 aaPredicted RBP10.25□□□□□ -0.77
LRRC28-209ENST00000558861 ZBBXA8MT70 800 aa10.24□□□□□ -0.77
LRRC28-209ENST00000558861 NR1H3Q13133 447 aa10.24□□□□□ -0.77
LRRC28-209ENST00000558861 HDGFL1Q5TGJ6 251 aa10.24□□□□□ -0.77
LRRC28-209ENST00000558861 NBPF14Q5TI25 921 aa10.24□□□□□ -0.77
LRRC28-209ENST00000558861 WRNQ14191 1432 aaPredicted RBP eCLIP10.24□□□□□ -0.77
LRRC28-209ENST00000558861 RNF223E7ERA6 249 aa10.23□□□□□ -0.77
LRRC28-209ENST00000558861 ARMC2Q8NEN0 867 aa10.23□□□□□ -0.77
LRRC28-209ENST00000558861 POLA1P09884 1462 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-209ENST00000558861 OCSTAMPQ9BR26 566 aa10.22□□□□□ -0.77
LRRC28-209ENST00000558861 ALG2Q9H553 416 aa10.22□□□□□ -0.77
LRRC28-209ENST00000558861 SERPINA10Q9UK55 444 aa10.22□□□□□ -0.77
LRRC28-209ENST00000558861 SYNJ1O43426 1573 aa10.22□□□□□ -0.77
LRRC28-209ENST00000558861 LINC01559Q495D7 138 aa10.21□□□□□ -0.77
LRRC28-209ENST00000558861 GPKOWQ92917 476 aaPredicted RBP eCLIP10.21□□□□□ -0.77
LRRC28-209ENST00000558861 ARXQ96QS3 562 aa10.21□□□□□ -0.77
LRRC28-209ENST00000558861 TOP2BQ02880 1626 aa10.2□□□□□ -0.78
LRRC28-209ENST00000558861 PLA2G2CQ5R387 149 aa10.2□□□□□ -0.78
LRRC28-209ENST00000558861 PDXDC2PQ6P474 469 aa10.2□□□□□ -0.78
LRRC28-209ENST00000558861 FGD5Q6ZNL6 1462 aa10.2□□□□□ -0.78
LRRC28-209ENST00000558861 PPP1R18Q6NYC8 613 aa10.19□□□□□ -0.78
LRRC28-209ENST00000558861 BAP1Q92560 729 aa10.19□□□□□ -0.78
LRRC28-209ENST00000558861 TARBP1Q13395 1621 aaKnown RBP10.18□□□□□ -0.78
LRRC28-209ENST00000558861 BIVM-ERCC5R4GMW8 1640 aa10.18□□□□□ -0.78
LRRC28-209ENST00000558861 IFT140Q96RY7 1462 aa10.18□□□□□ -0.78
LRRC28-209ENST00000558861 SOX11P35716 441 aa10.18□□□□□ -0.78
LRRC28-209ENST00000558861 EIF4G2P78344 907 aaKnown RBP eCLIP10.18□□□□□ -0.78
LRRC28-209ENST00000558861 PTK2Q05397 1052 aa10.18□□□□□ -0.78
LRRC28-209ENST00000558861 SEMA3FQ13275 785 aa10.18□□□□□ -0.78
LRRC28-209ENST00000558861 SH3BP5LQ7L8J4 393 aa10.18□□□□□ -0.78
LRRC28-209ENST00000558861 ANKLE1Q8NAG6 615 aa10.18□□□□□ -0.78
LRRC28-209ENST00000558861 GPSM3Q9Y4H4 160 aa10.18□□□□□ -0.78
LRRC28-209ENST00000558861 GGCXP38435 758 aa10.17□□□□□ -0.78
LRRC28-209ENST00000558861 FOXJ1Q92949 421 aa10.17□□□□□ -0.78
LRRC28-209ENST00000558861 UCN2Q96RP3 112 aa10.17□□□□□ -0.78
LRRC28-209ENST00000558861 ARHGAP9Q9BRR9 750 aa10.17□□□□□ -0.78
LRRC28-209ENST00000558861 CARD14Q9BXL6 1004 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms