RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 ABCC11Q96J66 1382 aa18.21■□□□□ 0.51
SMAD3-206ENST00000558739 PSME1Q06323 249 aa18.21■□□□□ 0.51
SMAD3-206ENST00000558739 SPON1Q9HCB6 807 aa18.21■□□□□ 0.51
SMAD3-206ENST00000558739 RRBP1Q9P2E9 1410 aaKnown RBP18.21■□□□□ 0.51
SMAD3-206ENST00000558739 MYOM1P52179 1685 aa18.21■□□□□ 0.51
SMAD3-206ENST00000558739 KCNQ2O43526 872 aa18.19■□□□□ 0.5
SMAD3-206ENST00000558739 PMFBP1Q8TBY8 1022 aa18.19■□□□□ 0.5
SMAD3-206ENST00000558739 YTHDC2Q9H6S0 1430 aaKnown RBP18.19■□□□□ 0.5
SMAD3-206ENST00000558739 CASZ1Q86V15 1759 aa18.19■□□□□ 0.5
SMAD3-206ENST00000558739 FAM196AQ6ZSG2 479 aa18.18■□□□□ 0.5
SMAD3-206ENST00000558739 SPATA31A1Q5TZJ5 1347 aa18.18■□□□□ 0.5
SMAD3-206ENST00000558739 PDGFDQ9GZP0 370 aaPredicted RBP18.16■□□□□ 0.5
SMAD3-206ENST00000558739 PIK3C2GO75747 1445 aa18.15■□□□□ 0.5
SMAD3-206ENST00000558739 DCAF8L1A6NGE4 600 aa18.15■□□□□ 0.5
SMAD3-206ENST00000558739 SAFB2Q14151 953 aaKnown RBP eCLIP18.15■□□□□ 0.5
SMAD3-206ENST00000558739 C1QTNF8P60827 252 aa18.14■□□□□ 0.49
SMAD3-206ENST00000558739 NBPF8Q3BBV2 869 aa18.14■□□□□ 0.49
SMAD3-206ENST00000558739 NBPF14Q5TI25 921 aa18.14■□□□□ 0.49
SMAD3-206ENST00000558739 ANO8Q9HCE9 1232 aaPredicted RBP18.14■□□□□ 0.49
SMAD3-206ENST00000558739 CHD4Q14839 1912 aa18.13■□□□□ 0.49
SMAD3-206ENST00000558739 CHRNA2Q15822 529 aa18.12■□□□□ 0.49
SMAD3-206ENST00000558739 PRDM11Q9NQV5 511 aa18.12■□□□□ 0.49
SMAD3-206ENST00000558739 USP35Q9P2H5 1018 aa18.12■□□□□ 0.49
SMAD3-206ENST00000558739 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
SMAD3-206ENST00000558739 KIAA0232Q92628 1395 aa18.11■□□□□ 0.49
SMAD3-206ENST00000558739 SPATA31E1Q6ZUB1 1445 aa18.11■□□□□ 0.49
SMAD3-206ENST00000558739 PHRF1Q9P1Y6 1649 aaKnown RBP18.11■□□□□ 0.49
SMAD3-206ENST00000558739 RGL3Q3MIN7 710 aa18.1■□□□□ 0.49
SMAD3-206ENST00000558739 ANKARQ7Z5J8 1434 aa18.09■□□□□ 0.49
SMAD3-206ENST00000558739 ZBTB7AO95365 584 aa18.08■□□□□ 0.48
SMAD3-206ENST00000558739 PRR36Q9H6K5 1346 aa18.07■□□□□ 0.48
SMAD3-206ENST00000558739 ACIN1Q9UKV3 1341 aaKnown RBP18.07■□□□□ 0.48
SMAD3-206ENST00000558739 PTGER2P43116 358 aa18.07■□□□□ 0.48
SMAD3-206ENST00000558739 RGPD3A6NKT7 1758 aaPredicted RBP18.07■□□□□ 0.48
SMAD3-206ENST00000558739 RGPD4Q7Z3J3 1758 aa18.07■□□□□ 0.48
SMAD3-206ENST00000558739 PEAK1Q9H792 1746 aa18.06■□□□□ 0.48
SMAD3-206ENST00000558739 PRAM1Q96QH2 718 aa18.06■□□□□ 0.48
SMAD3-206ENST00000558739 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
SMAD3-206ENST00000558739 PDE3BQ13370 1112 aa18.05■□□□□ 0.48
SMAD3-206ENST00000558739 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
SMAD3-206ENST00000558739 ANKRD30BQ9BXX2 1392 aa18.04■□□□□ 0.48
SMAD3-206ENST00000558739 PTF1AQ7RTS3 328 aa18.04■□□□□ 0.48
SMAD3-206ENST00000558739 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
SMAD3-206ENST00000558739 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
SMAD3-206ENST00000558739 SLC4A1APQ9BWU0 796 aaKnown RBP18.03■□□□□ 0.48
SMAD3-206ENST00000558739 FHDC1Q9C0D6 1143 aaPredicted RBP18.03■□□□□ 0.48
SMAD3-206ENST00000558739 PARP4Q9UKK3 1724 aaKnown RBP18.03■□□□□ 0.48
SMAD3-206ENST00000558739 PAK3O75914 559 aaPredicted RBP18.02■□□□□ 0.48
SMAD3-206ENST00000558739 ZC3H6P61129 1189 aaKnown RBP18.02■□□□□ 0.48
SMAD3-206ENST00000558739 BARGINQ6ZT62 677 aa18.02■□□□□ 0.48
SMAD3-206ENST00000558739 PPARGC1BQ86YN6 1023 aaKnown RBP18.02■□□□□ 0.48
SMAD3-206ENST00000558739 SIRT1Q96EB6 747 aa18.02■□□□□ 0.48
SMAD3-206ENST00000558739 ATF5Q9Y2D1 282 aaPredicted RBP18.02■□□□□ 0.48
SMAD3-206ENST00000558739 LARP1Q6PKG0 1096 aaKnown RBP18.01■□□□□ 0.47
SMAD3-206ENST00000558739 LMO7Q8WWI1 1683 aa18.01■□□□□ 0.47
SMAD3-206ENST00000558739 TULP4Q9NRJ4 1543 aa18■□□□□ 0.47
SMAD3-206ENST00000558739 NUTM2GQ5VZR2 741 aa18■□□□□ 0.47
SMAD3-206ENST00000558739 SYT17Q9BSW7 474 aa18■□□□□ 0.47
SMAD3-206ENST00000558739 LRRC37A3O60309 1634 aa17.99■□□□□ 0.47
SMAD3-206ENST00000558739 CFAP70Q5T0N1 1121 aa17.99■□□□□ 0.47
SMAD3-206ENST00000558739 DLC1Q96QB1 1528 aa17.98■□□□□ 0.47
SMAD3-206ENST00000558739 C14orf93Q9H972 538 aaKnown RBP17.97■□□□□ 0.47
SMAD3-206ENST00000558739 MINK1Q8N4C8 1332 aaPredicted RBP17.97■□□□□ 0.47
SMAD3-206ENST00000558739 PROM2Q8N271 834 aa17.96■□□□□ 0.47
SMAD3-206ENST00000558739 TCP11L2Q8N4U5 519 aa17.96■□□□□ 0.47
SMAD3-206ENST00000558739 OVOS2A0A0G2JMS6 1433 aa17.96■□□□□ 0.47
SMAD3-206ENST00000558739 OVOS2A0A0J9YW53 1432 aa17.96■□□□□ 0.47
SMAD3-206ENST00000558739 OVOS2Q6IE36 1432 aa17.96■□□□□ 0.47
SMAD3-206ENST00000558739 SHANK3Q9BYB0 1731 aa17.95■□□□□ 0.46
SMAD3-206ENST00000558739 DHX57Q6P158 1386 aaKnown RBP17.95■□□□□ 0.46
SMAD3-206ENST00000558739 POGKQ9P215 609 aa17.95■□□□□ 0.46
SMAD3-206ENST00000558739 GIGYF1O75420 1035 aaPredicted RBP17.94■□□□□ 0.46
SMAD3-206ENST00000558739 NGDNQ8NEJ9 315 aaKnown RBP17.94■□□□□ 0.46
SMAD3-206ENST00000558739 BCL11BQ9C0K0 894 aaPredicted RBP17.94■□□□□ 0.46
SMAD3-206ENST00000558739 ADGRB1O14514 1584 aa17.94■□□□□ 0.46
SMAD3-206ENST00000558739 EVA1CP58658 441 aa17.93■□□□□ 0.46
SMAD3-206ENST00000558739 SGIP1Q9BQI5 828 aa17.93■□□□□ 0.46
SMAD3-206ENST00000558739 ATP7BP35670 1465 aa17.92■□□□□ 0.46
SMAD3-206ENST00000558739 COL5A2P05997 1499 aaPredicted RBP17.91■□□□□ 0.46
SMAD3-206ENST00000558739 PLSCR1O15162 318 aa17.91■□□□□ 0.46
SMAD3-206ENST00000558739 ITSN1Q15811 1721 aa17.91■□□□□ 0.46
SMAD3-206ENST00000558739 WNK3Q9BYP7 1800 aa17.9■□□□□ 0.46
SMAD3-206ENST00000558739 WASLO00401 505 aaPredicted RBP17.88■□□□□ 0.45
SMAD3-206ENST00000558739 TRAK1Q9UPV9 953 aa17.88■□□□□ 0.45
SMAD3-206ENST00000558739 EIF3AQ14152 1382 aaKnown RBP17.88■□□□□ 0.45
SMAD3-206ENST00000558739 TOPAZ1Q8N9V7 1692 aa17.87■□□□□ 0.45
SMAD3-206ENST00000558739 AKAP12Q02952 1782 aa17.86■□□□□ 0.45
SMAD3-206ENST00000558739 MTFR1LQ9H019 292 aa17.86■□□□□ 0.45
SMAD3-206ENST00000558739 CPDO75976 1380 aa17.86■□□□□ 0.45
SMAD3-206ENST00000558739 SLC15A2Q16348 729 aa17.85■□□□□ 0.45
SMAD3-206ENST00000558739 STK32BQ9NY57 414 aa17.85■□□□□ 0.45
SMAD3-206ENST00000558739 THRAP3Q9Y2W1 955 aaKnown RBP17.85■□□□□ 0.45
SMAD3-206ENST00000558739 PAPPAQ13219 1627 aa17.84■□□□□ 0.45
SMAD3-206ENST00000558739 CRB1P82279 1406 aa17.84■□□□□ 0.45
SMAD3-206ENST00000558739 MAP3K5Q99683 1374 aa17.83■□□□□ 0.45
SMAD3-206ENST00000558739 USP19O94966 1318 aa17.83■□□□□ 0.44
SMAD3-206ENST00000558739 TXNRD1Q16881 649 aa17.83■□□□□ 0.44
SMAD3-206ENST00000558739 MARCH10Q8NA82 808 aaPredicted RBP17.83■□□□□ 0.44
SMAD3-206ENST00000558739 ARXQ96QS3 562 aa17.83■□□□□ 0.44
SMAD3-206ENST00000558739 GPR162Q16538 588 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms