RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 NRXN3Q9Y4C0 1643 aa17.18■□□□□ 0.34
HMGB1P8-201ENST00000558211 PIK3C2GO75747 1445 aa17.17■□□□□ 0.34
HMGB1P8-201ENST00000558211 TBX22Q9Y458 520 aa17.17■□□□□ 0.34
HMGB1P8-201ENST00000558211 SETBP1Q9Y6X0 1596 aa17.17■□□□□ 0.34
HMGB1P8-201ENST00000558211 G3V3G9 751 aa17.16■□□□□ 0.34
HMGB1P8-201ENST00000558211 TMEM132EQ6IEE7 984 aa17.16■□□□□ 0.34
HMGB1P8-201ENST00000558211 TIMELESSQ9UNS1 1208 aa17.16■□□□□ 0.34
HMGB1P8-201ENST00000558211 ALKQ9UM73 1620 aa17.16■□□□□ 0.34
HMGB1P8-201ENST00000558211 NRXN1Q9ULB1 1477 aa17.16■□□□□ 0.34
HMGB1P8-201ENST00000558211 PRAG1Q86YV5 1406 aa17.15■□□□□ 0.34
HMGB1P8-201ENST00000558211 NBPF8Q3BBV2 869 aa17.15■□□□□ 0.34
HMGB1P8-201ENST00000558211 LHX8Q68G74 356 aa17.15■□□□□ 0.34
HMGB1P8-201ENST00000558211 CADPS2Q86UW7 1296 aa17.15■□□□□ 0.34
HMGB1P8-201ENST00000558211 C14orf93Q9H972 538 aaKnown RBP17.15■□□□□ 0.34
HMGB1P8-201ENST00000558211 METP08581 1390 aa17.14■□□□□ 0.33
HMGB1P8-201ENST00000558211 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
HMGB1P8-201ENST00000558211 ZNF335Q9H4Z2 1342 aaPredicted RBP17.13■□□□□ 0.33
HMGB1P8-201ENST00000558211 DIP2AQ14689 1571 aa17.12■□□□□ 0.33
HMGB1P8-201ENST00000558211 NBPF1Q3BBV0 1214 aa17.12■□□□□ 0.33
HMGB1P8-201ENST00000558211 STK26Q9P289 416 aa17.12■□□□□ 0.33
HMGB1P8-201ENST00000558211 SETD1AO15047 1707 aaKnown RBP17.11■□□□□ 0.33
HMGB1P8-201ENST00000558211 AMOTL2Q9Y2J4 779 aa17.1■□□□□ 0.33
HMGB1P8-201ENST00000558211 KCNA6P17658 529 aa17.09■□□□□ 0.33
HMGB1P8-201ENST00000558211 LAMC1P11047 1609 aa17.09■□□□□ 0.33
HMGB1P8-201ENST00000558211 CHD2O14647 1828 aaKnown RBP17.09■□□□□ 0.33
HMGB1P8-201ENST00000558211 PTPRUQ92729 1446 aa17.08■□□□□ 0.32
HMGB1P8-201ENST00000558211 TMEM92Q6UXU6 159 aa17.08■□□□□ 0.32
HMGB1P8-201ENST00000558211 MAMSTRQ6ZN01 415 aa17.08■□□□□ 0.32
HMGB1P8-201ENST00000558211 C3orf67Q6ZVT6 689 aa17.08■□□□□ 0.32
HMGB1P8-201ENST00000558211 TRPM1Q7Z4N2 1603 aa17.07■□□□□ 0.32
HMGB1P8-201ENST00000558211 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
HMGB1P8-201ENST00000558211 STRCP1A6NGW2 1772 aa17.07■□□□□ 0.32
HMGB1P8-201ENST00000558211 KIAA1210Q9ULL0 1709 aa17.07■□□□□ 0.32
HMGB1P8-201ENST00000558211 ASXL1Q8IXJ9 1541 aa17.06■□□□□ 0.32
HMGB1P8-201ENST00000558211 ROCK2O75116 1388 aaKnown RBP17.06■□□□□ 0.32
HMGB1P8-201ENST00000558211 RBM33Q96EV2 1170 aaKnown RBP17.06■□□□□ 0.32
HMGB1P8-201ENST00000558211 TRAK1Q9UPV9 953 aa17.06■□□□□ 0.32
HMGB1P8-201ENST00000558211 PROSER2Q86WR7 435 aaPredicted RBP17.05■□□□□ 0.32
HMGB1P8-201ENST00000558211 OTUD5Q96G74 571 aa17.05■□□□□ 0.32
HMGB1P8-201ENST00000558211 CRISPLD2Q9H0B8 497 aa17.05■□□□□ 0.32
HMGB1P8-201ENST00000558211 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.05■□□□□ 0.32
HMGB1P8-201ENST00000558211 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
HMGB1P8-201ENST00000558211 LRPPRCP42704 1394 aaKnown RBP17.03■□□□□ 0.32
HMGB1P8-201ENST00000558211 ADGRB1O14514 1584 aa17.03■□□□□ 0.32
HMGB1P8-201ENST00000558211 KIF3CO14782 793 aa17.03■□□□□ 0.32
HMGB1P8-201ENST00000558211 CARD11Q9BXL7 1154 aa17.03■□□□□ 0.32
HMGB1P8-201ENST00000558211 SCUBE2Q9NQ36 999 aa17.03■□□□□ 0.32
HMGB1P8-201ENST00000558211 RALGAPBQ86X10 1494 aa17.01■□□□□ 0.31
HMGB1P8-201ENST00000558211 SAFB2Q14151 953 aaKnown RBP eCLIP17.01■□□□□ 0.31
HMGB1P8-201ENST00000558211 WAPLQ7Z5K2 1190 aa17.01■□□□□ 0.31
HMGB1P8-201ENST00000558211 NWD1Q149M9 1564 aa17.01■□□□□ 0.31
HMGB1P8-201ENST00000558211 XRN1Q8IZH2 1706 aaKnown RBP17.01■□□□□ 0.31
HMGB1P8-201ENST00000558211 C14orf37Q86TY3 774 aa17■□□□□ 0.31
HMGB1P8-201ENST00000558211 POGKQ9P215 609 aa17■□□□□ 0.31
HMGB1P8-201ENST00000558211 ABCC11Q96J66 1382 aa17■□□□□ 0.31
HMGB1P8-201ENST00000558211 LTBP4Q8N2S1 1624 aa16.99■□□□□ 0.31
HMGB1P8-201ENST00000558211 GPHNQ9NQX3 736 aaPredicted RBP16.99■□□□□ 0.31
HMGB1P8-201ENST00000558211 ROBO2Q9HCK4 1378 aa16.99■□□□□ 0.31
HMGB1P8-201ENST00000558211 CPS1P31327 1500 aa16.98■□□□□ 0.31
HMGB1P8-201ENST00000558211 ZEB1P37275 1124 aaPredicted RBP16.98■□□□□ 0.31
HMGB1P8-201ENST00000558211 PRAM1Q96QH2 718 aa16.98■□□□□ 0.31
HMGB1P8-201ENST00000558211 KNDC1Q76NI1 1749 aa16.97■□□□□ 0.31
HMGB1P8-201ENST00000558211 TMEM94Q12767 1356 aa16.97■□□□□ 0.31
HMGB1P8-201ENST00000558211 PLEKHH1Q9ULM0 1364 aa16.97■□□□□ 0.31
HMGB1P8-201ENST00000558211 NKTRP30414 1462 aaKnown RBP16.97■□□□□ 0.31
HMGB1P8-201ENST00000558211 LRRC7Q96NW7 1537 aa16.96■□□□□ 0.31
HMGB1P8-201ENST00000558211 C2orf72A6NCS6 295 aa16.96■□□□□ 0.31
HMGB1P8-201ENST00000558211 PDE4AP27815 886 aa16.96■□□□□ 0.31
HMGB1P8-201ENST00000558211 GPRASP1Q5JY77 1395 aa16.96■□□□□ 0.31
HMGB1P8-201ENST00000558211 TECPR2O15040 1411 aa16.95■□□□□ 0.3
HMGB1P8-201ENST00000558211 PTCH1Q13635 1447 aa16.95■□□□□ 0.3
HMGB1P8-201ENST00000558211 ARHGEF28Q8N1W1 1705 aaKnown RBP16.94■□□□□ 0.3
HMGB1P8-201ENST00000558211 CERKQ8TCT0 537 aa16.94■□□□□ 0.3
HMGB1P8-201ENST00000558211 XIRP1Q702N8 1843 aaKnown RBP16.93■□□□□ 0.3
HMGB1P8-201ENST00000558211 DLC1Q96QB1 1528 aa16.93■□□□□ 0.3
HMGB1P8-201ENST00000558211 MFSD10Q14728 455 aa16.93■□□□□ 0.3
HMGB1P8-201ENST00000558211 TMC2Q8TDI7 906 aa16.93■□□□□ 0.3
HMGB1P8-201ENST00000558211 SIRT1Q96EB6 747 aa16.93■□□□□ 0.3
HMGB1P8-201ENST00000558211 MINK1Q8N4C8 1332 aaPredicted RBP16.93■□□□□ 0.3
HMGB1P8-201ENST00000558211 SLAIN1Q8ND83 568 aa16.92■□□□□ 0.3
HMGB1P8-201ENST00000558211 FAM135BQ49AJ0 1406 aa16.92■□□□□ 0.3
HMGB1P8-201ENST00000558211 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
HMGB1P8-201ENST00000558211 HIRIP3Q9BW71 556 aaPredicted RBP16.91■□□□□ 0.3
HMGB1P8-201ENST00000558211 EIF3AQ14152 1382 aaKnown RBP16.9■□□□□ 0.3
HMGB1P8-201ENST00000558211 LARP6Q9BRS8 491 aaKnown RBP16.9■□□□□ 0.3
HMGB1P8-201ENST00000558211 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.9■□□□□ 0.3
HMGB1P8-201ENST00000558211 USP47Q96K76 1375 aa16.89■□□□□ 0.3
HMGB1P8-201ENST00000558211 ST20-MTHFSA0A0A6YYL1 179 aa16.89■□□□□ 0.29
HMGB1P8-201ENST00000558211 FOXK1P85037 733 aa16.89■□□□□ 0.29
HMGB1P8-201ENST00000558211 MSH6P52701 1360 aa16.89■□□□□ 0.29
HMGB1P8-201ENST00000558211 C19orf44Q9H6X5 657 aa16.88■□□□□ 0.29
HMGB1P8-201ENST00000558211 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
HMGB1P8-201ENST00000558211 NALCNQ8IZF0 1738 aa16.87■□□□□ 0.29
HMGB1P8-201ENST00000558211 NUTM2FA1L443 756 aa16.87■□□□□ 0.29
HMGB1P8-201ENST00000558211 ATF3P18847 181 aa16.87■□□□□ 0.29
HMGB1P8-201ENST00000558211 EIF4G2P78344 907 aaKnown RBP eCLIP16.87■□□□□ 0.29
HMGB1P8-201ENST00000558211 DSG2Q14126 1118 aa16.87■□□□□ 0.29
HMGB1P8-201ENST00000558211 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
HMGB1P8-201ENST00000558211 NCOA3Q9Y6Q9 1424 aa16.87■□□□□ 0.29
HMGB1P8-201ENST00000558211 HSPA5P11021 654 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms