RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 KCNA4P22459 653 aa9.65□□□□□ -0.86
MTHFD1-215ENST00000557370 EN1Q05925 392 aaPredicted RBP9.65□□□□□ -0.86
MTHFD1-215ENST00000557370 POLR3GLQ9BT43 218 aa9.65□□□□□ -0.86
MTHFD1-215ENST00000557370 ZNF219Q9P2Y4 722 aaPredicted RBP9.65□□□□□ -0.86
MTHFD1-215ENST00000557370 KDM2AQ9Y2K7 1162 aa9.65□□□□□ -0.86
MTHFD1-215ENST00000557370 TRPM2O94759 1503 aa9.65□□□□□ -0.86
MTHFD1-215ENST00000557370 NPC1L1Q9UHC9 1359 aa9.64□□□□□ -0.87
MTHFD1-215ENST00000557370 KRT27Q7Z3Y8 459 aa9.64□□□□□ -0.87
MTHFD1-215ENST00000557370 SEPT12Q8IYM1 358 aa9.64□□□□□ -0.87
MTHFD1-215ENST00000557370 CCDC9Q9Y3X0 531 aaKnown RBP9.64□□□□□ -0.87
MTHFD1-215ENST00000557370 TBX22Q9Y458 520 aa9.64□□□□□ -0.87
MTHFD1-215ENST00000557370 BRWD3Q6RI45 1802 aa9.63□□□□□ -0.87
MTHFD1-215ENST00000557370 PER1O15534 1290 aaPredicted RBP9.63□□□□□ -0.87
MTHFD1-215ENST00000557370 NINLQ9Y2I6 1382 aa9.63□□□□□ -0.87
MTHFD1-215ENST00000557370 AMOTL2Q9Y2J4 779 aa9.62□□□□□ -0.87
MTHFD1-215ENST00000557370 RIMS2Q9UQ26 1411 aa9.62□□□□□ -0.87
MTHFD1-215ENST00000557370 TCERG1O14776 1098 aaKnown RBP9.61□□□□□ -0.87
MTHFD1-215ENST00000557370 GIGYF1O75420 1035 aaPredicted RBP9.61□□□□□ -0.87
MTHFD1-215ENST00000557370 MS4A1P11836 297 aa9.61□□□□□ -0.87
MTHFD1-215ENST00000557370 ANP32AP39687 249 aaKnown RBP9.61□□□□□ -0.87
MTHFD1-215ENST00000557370 RCAN3Q9UKA8 241 aa9.61□□□□□ -0.87
MTHFD1-215ENST00000557370 GLI3P10071 1580 aa9.61□□□□□ -0.87
MTHFD1-215ENST00000557370 PIK3R4Q99570 1358 aa9.61□□□□□ -0.87
MTHFD1-215ENST00000557370 RRP1P56182 461 aaKnown RBP9.6□□□□□ -0.87
MTHFD1-215ENST00000557370 IRX6P78412 446 aaPredicted RBP9.6□□□□□ -0.87
MTHFD1-215ENST00000557370 B4GALNT3Q6L9W6 998 aa9.6□□□□□ -0.87
MTHFD1-215ENST00000557370 UNC5CLQ8IV45 518 aa9.6□□□□□ -0.87
MTHFD1-215ENST00000557370 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.6□□□□□ -0.87
MTHFD1-215ENST00000557370 TESK2Q96S53 571 aa9.6□□□□□ -0.87
MTHFD1-215ENST00000557370 SPON1Q9HCB6 807 aa9.6□□□□□ -0.87
MTHFD1-215ENST00000557370 CAMTA1Q9Y6Y1 1673 aa9.59□□□□□ -0.87
MTHFD1-215ENST00000557370 CHGAP10645 457 aaKnown RBP9.59□□□□□ -0.87
MTHFD1-215ENST00000557370 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.59□□□□□ -0.87
MTHFD1-215ENST00000557370 SLC52A1Q9NWF4 448 aa9.59□□□□□ -0.87
MTHFD1-215ENST00000557370 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.59□□□□□ -0.87
MTHFD1-215ENST00000557370 PIK3C2GO75747 1445 aa9.58□□□□□ -0.88
MTHFD1-215ENST00000557370 ZFYVE9O95405 1425 aa9.58□□□□□ -0.88
MTHFD1-215ENST00000557370 KNSTRNQ9Y448 316 aa9.58□□□□□ -0.88
MTHFD1-215ENST00000557370 RGPD1P0DJD0 1748 aa9.58□□□□□ -0.88
MTHFD1-215ENST00000557370 MARF1Q9Y4F3 1742 aaKnown RBP9.58□□□□□ -0.88
MTHFD1-215ENST00000557370 MYOM2P54296 1465 aa9.58□□□□□ -0.88
MTHFD1-215ENST00000557370 HAP1P54257 671 aaPredicted RBP9.57□□□□□ -0.88
MTHFD1-215ENST00000557370 EZH2Q15910 746 aaKnown RBP9.57□□□□□ -0.88
MTHFD1-215ENST00000557370 SOS2Q07890 1332 aaPredicted RBP9.56□□□□□ -0.88
MTHFD1-215ENST00000557370 SBNO2Q9Y2G9 1366 aa9.56□□□□□ -0.88
MTHFD1-215ENST00000557370 RGL3Q3MIN7 710 aa9.56□□□□□ -0.88
MTHFD1-215ENST00000557370 PANK3Q9H999 370 aa9.56□□□□□ -0.88
MTHFD1-215ENST00000557370 KIF1BO60333 1816 aa9.56□□□□□ -0.88
MTHFD1-215ENST00000557370 COL22A1Q8NFW1 1626 aaPredicted RBP9.56□□□□□ -0.88
MTHFD1-215ENST00000557370 LMTK2Q8IWU2 1503 aa9.56□□□□□ -0.88
MTHFD1-215ENST00000557370 ADAMTS13Q76LX8 1427 aa9.56□□□□□ -0.88
MTHFD1-215ENST00000557370 ADGRL3Q9HAR2 1447 aa9.56□□□□□ -0.88
MTHFD1-215ENST00000557370 MYO5BQ9ULV0 1848 aa9.55□□□□□ -0.88
MTHFD1-215ENST00000557370 WDR43Q15061 677 aaKnown RBP eCLIP9.55□□□□□ -0.88
MTHFD1-215ENST00000557370 NBPF1Q3BBV0 1214 aa9.55□□□□□ -0.88
MTHFD1-215ENST00000557370 NBPF14Q5TI25 921 aa9.55□□□□□ -0.88
MTHFD1-215ENST00000557370 NOP58Q9Y2X3 529 aaKnown RBP9.55□□□□□ -0.88
MTHFD1-215ENST00000557370 ADGRB2O60241 1585 aa9.54□□□□□ -0.88
MTHFD1-215ENST00000557370 C1orf167Q5SNV9 1468 aa9.54□□□□□ -0.88
MTHFD1-215ENST00000557370 KCNQ2O43526 872 aa9.54□□□□□ -0.88
MTHFD1-215ENST00000557370 IPO9Q96P70 1041 aaKnown RBP9.54□□□□□ -0.88
MTHFD1-215ENST00000557370 AAMPQ13685 434 aa9.53□□□□□ -0.88
MTHFD1-215ENST00000557370 PUS7Q96PZ0 661 aaKnown RBP9.53□□□□□ -0.88
MTHFD1-215ENST00000557370 ORAI2Q96SN7 254 aa9.53□□□□□ -0.88
MTHFD1-215ENST00000557370 PTPRUQ92729 1446 aa9.53□□□□□ -0.88
MTHFD1-215ENST00000557370 CLTCL1P53675 1640 aa9.53□□□□□ -0.88
MTHFD1-215ENST00000557370 SLIT2O94813 1529 aa9.52□□□□□ -0.88
MTHFD1-215ENST00000557370 NOS1P29475 1434 aa9.52□□□□□ -0.89
MTHFD1-215ENST00000557370 VPS72Q15906 364 aa9.52□□□□□ -0.89
MTHFD1-215ENST00000557370 FAM182BQ5T319 152 aa9.52□□□□□ -0.89
MTHFD1-215ENST00000557370 ZBTB47Q9UFB7 747 aaPredicted RBP9.52□□□□□ -0.89
MTHFD1-215ENST00000557370 CHD4Q14839 1912 aa9.52□□□□□ -0.89
MTHFD1-215ENST00000557370 RPGRIP1LQ68CZ1 1315 aa9.52□□□□□ -0.89
MTHFD1-215ENST00000557370 NPHP3Q7Z494 1330 aa9.52□□□□□ -0.89
MTHFD1-215ENST00000557370 NALCNQ8IZF0 1738 aa9.51□□□□□ -0.89
MTHFD1-215ENST00000557370 DISP2A7MBM2 1401 aa9.51□□□□□ -0.89
MTHFD1-215ENST00000557370 DDRGK1Q96HY6 314 aa9.51□□□□□ -0.89
MTHFD1-215ENST00000557370 IFT172Q9UG01 1749 aa9.51□□□□□ -0.89
MTHFD1-215ENST00000557370 PLEKHG5O94827 1062 aa9.5□□□□□ -0.89
MTHFD1-215ENST00000557370 XPCQ01831 940 aaPredicted RBP9.5□□□□□ -0.89
MTHFD1-215ENST00000557370 FAM98CQ17RN3 349 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-215ENST00000557370 USP35Q9P2H5 1018 aa9.5□□□□□ -0.89
MTHFD1-215ENST00000557370 NRXN1Q9ULB1 1477 aa9.5□□□□□ -0.89
MTHFD1-215ENST00000557370 XRN1Q8IZH2 1706 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-215ENST00000557370 APBA3O96018 575 aa9.49□□□□□ -0.89
MTHFD1-215ENST00000557370 PPP2R1AP30153 589 aa9.49□□□□□ -0.89
MTHFD1-215ENST00000557370 GOLGA2Q08379 1002 aa9.49□□□□□ -0.89
MTHFD1-215ENST00000557370 AMER1Q5JTC6 1135 aaPredicted RBP9.49□□□□□ -0.89
MTHFD1-215ENST00000557370 CC2D1BQ5T0F9 858 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-215ENST00000557370 TNS1Q9HBL0 1735 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-215ENST00000557370 CENPQQ7L2Z9 268 aaPredicted RBP9.48□□□□□ -0.89
MTHFD1-215ENST00000557370 CAMKK2Q96RR4 588 aa9.48□□□□□ -0.89
MTHFD1-215ENST00000557370 TMEM131LA2VDJ0 1609 aa9.48□□□□□ -0.89
MTHFD1-215ENST00000557370 USP32Q8NFA0 1604 aa9.47□□□□□ -0.89
MTHFD1-215ENST00000557370 ONECUT3O60422 494 aaPredicted RBP9.47□□□□□ -0.89
MTHFD1-215ENST00000557370 TRIM37O94972 964 aa9.47□□□□□ -0.89
MTHFD1-215ENST00000557370 ESCO1Q5FWF5 840 aa9.47□□□□□ -0.89
MTHFD1-215ENST00000557370 MYOM1P52179 1685 aa9.47□□□□□ -0.89
MTHFD1-215ENST00000557370 E9PSI1 815 aa9.46□□□□□ -0.9
MTHFD1-215ENST00000557370 PPM1GO15355 546 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms