RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-223ENST00000557294 TRIM37O94972 964 aa27.38■■□□□ 1.97
PRKCH-223ENST00000557294 ACIN1Q9UKV3 1341 aaKnown RBP27.37■■□□□ 1.97
PRKCH-223ENST00000557294 PRDM11Q9NQV5 511 aa27.36■■□□□ 1.97
PRKCH-223ENST00000557294 SPATA31A1Q5TZJ5 1347 aa27.36■■□□□ 1.97
PRKCH-223ENST00000557294 APBA3O96018 575 aa27.35■■□□□ 1.97
PRKCH-223ENST00000557294 YY1P25490 414 aa27.35■■□□□ 1.97
PRKCH-223ENST00000557294 THSD7AQ9UPZ6 1657 aa27.35■■□□□ 1.97
PRKCH-223ENST00000557294 TRPM3Q9HCF6 1732 aaPredicted RBP27.35■■□□□ 1.97
PRKCH-223ENST00000557294 PARD3Q8TEW0 1356 aa27.35■■□□□ 1.97
PRKCH-223ENST00000557294 DLC1Q96QB1 1528 aa27.33■■□□□ 1.97
PRKCH-223ENST00000557294 ALS2Q96Q42 1657 aa27.33■■□□□ 1.97
PRKCH-223ENST00000557294 TNS1Q9HBL0 1735 aaKnown RBP27.33■■□□□ 1.96
PRKCH-223ENST00000557294 HIRIP3Q9BW71 556 aaPredicted RBP27.32■■□□□ 1.96
PRKCH-223ENST00000557294 PRR36Q9H6K5 1346 aa27.32■■□□□ 1.96
PRKCH-223ENST00000557294 PAK3O75914 559 aaPredicted RBP27.31■■□□□ 1.96
PRKCH-223ENST00000557294 NGDNQ8NEJ9 315 aaKnown RBP27.31■■□□□ 1.96
PRKCH-223ENST00000557294 EIF3AQ14152 1382 aaKnown RBP27.3■■□□□ 1.96
PRKCH-223ENST00000557294 NBPF8Q3BBV2 869 aa27.29■■□□□ 1.96
PRKCH-223ENST00000557294 NBPF14Q5TI25 921 aa27.29■■□□□ 1.96
PRKCH-223ENST00000557294 ADGRB2O60241 1585 aa27.29■■□□□ 1.96
PRKCH-223ENST00000557294 WASLO00401 505 aaPredicted RBP27.28■■□□□ 1.96
PRKCH-223ENST00000557294 STRN4Q9NRL3 753 aa27.27■■□□□ 1.96
PRKCH-223ENST00000557294 TRAK1Q9UPV9 953 aa27.27■■□□□ 1.96
PRKCH-223ENST00000557294 KIAA0232Q92628 1395 aa27.26■■□□□ 1.95
PRKCH-223ENST00000557294 MINK1Q8N4C8 1332 aaPredicted RBP27.26■■□□□ 1.95
PRKCH-223ENST00000557294 PDE3BQ13370 1112 aa27.25■■□□□ 1.95
PRKCH-223ENST00000557294 CHRNA2Q15822 529 aa27.25■■□□□ 1.95
PRKCH-223ENST00000557294 BARGINQ6ZT62 677 aa27.25■■□□□ 1.95
PRKCH-223ENST00000557294 TULP4Q9NRJ4 1543 aa27.22■■□□□ 1.95
PRKCH-223ENST00000557294 USP35Q9P2H5 1018 aa27.22■■□□□ 1.95
PRKCH-223ENST00000557294 CRYBG1Q9Y4K1 1723 aa27.21■■□□□ 1.95
PRKCH-223ENST00000557294 EVA1CP58658 441 aa27.21■■□□□ 1.95
PRKCH-223ENST00000557294 SPON1Q9HCB6 807 aa27.21■■□□□ 1.95
PRKCH-223ENST00000557294 DCAF8L1A6NGE4 600 aa27.2■■□□□ 1.94
PRKCH-223ENST00000557294 ZC3H6P61129 1189 aaKnown RBP27.2■■□□□ 1.94
PRKCH-223ENST00000557294 ADGRB1O14514 1584 aa27.19■■□□□ 1.94
PRKCH-223ENST00000557294 PPP1R1BQ9UD71 204 aaPredicted RBP27.19■■□□□ 1.94
PRKCH-223ENST00000557294 KCNQ2O43526 872 aa27.18■■□□□ 1.94
PRKCH-223ENST00000557294 NUDT16Q96DE0 195 aaKnown RBP27.16■■□□□ 1.94
PRKCH-223ENST00000557294 TCP11L2Q8N4U5 519 aa27.15■■□□□ 1.94
PRKCH-223ENST00000557294 RREB1Q92766 1687 aa27.14■■□□□ 1.94
PRKCH-223ENST00000557294 SSH2Q76I76 1423 aa27.14■■□□□ 1.93
PRKCH-223ENST00000557294 NUTM2GQ5VZR2 741 aa27.13■■□□□ 1.93
PRKCH-223ENST00000557294 LARP1Q6PKG0 1096 aaKnown RBP27.13■■□□□ 1.93
PRKCH-223ENST00000557294 NINLQ9Y2I6 1382 aa27.12■■□□□ 1.93
PRKCH-223ENST00000557294 C11orf95C9JLR9 678 aaPredicted RBP27.12■■□□□ 1.93
PRKCH-223ENST00000557294 THRAP3Q9Y2W1 955 aaKnown RBP27.12■■□□□ 1.93
PRKCH-223ENST00000557294 NUP188Q5SRE5 1749 aa27.1■■□□□ 1.93
PRKCH-223ENST00000557294 ATP7BP35670 1465 aa27.09■■□□□ 1.93
PRKCH-223ENST00000557294 KDM2AQ9Y2K7 1162 aa27.08■■□□□ 1.93
PRKCH-223ENST00000557294 STAC3Q96MF2 364 aa27.07■■□□□ 1.92
PRKCH-223ENST00000557294 CAMTA1Q9Y6Y1 1673 aa27.07■■□□□ 1.92
PRKCH-223ENST00000557294 PHRF1Q9P1Y6 1649 aaKnown RBP27.06■■□□□ 1.92
PRKCH-223ENST00000557294 CPDO75976 1380 aa27.06■■□□□ 1.92
PRKCH-223ENST00000557294 PLSCR1O15162 318 aa27.05■■□□□ 1.92
PRKCH-223ENST00000557294 ABTB2Q8N961 1025 aa27.05■■□□□ 1.92
PRKCH-223ENST00000557294 DCAF11Q8TEB1 546 aa27.05■■□□□ 1.92
PRKCH-223ENST00000557294 CDK19Q9BWU1 502 aa27.05■■□□□ 1.92
PRKCH-223ENST00000557294 ACEP12821 1306 aa27.05■■□□□ 1.92
PRKCH-223ENST00000557294 POLR3AO14802 1390 aaPredicted RBP27.05■■□□□ 1.92
PRKCH-223ENST00000557294 CCDC61Q9Y6R9 512 aa27.04■■□□□ 1.92
PRKCH-223ENST00000557294 PLEKHG3A1L390 1219 aa27.03■■□□□ 1.92
PRKCH-223ENST00000557294 ITSN1Q15811 1721 aa27■■□□□ 1.91
PRKCH-223ENST00000557294 USP19O94966 1318 aa26.99■■□□□ 1.91
PRKCH-223ENST00000557294 GCP02774 474 aa26.99■■□□□ 1.91
PRKCH-223ENST00000557294 NLRP13Q86W25 1043 aa26.98■■□□□ 1.91
PRKCH-223ENST00000557294 LMO7Q8WWI1 1683 aa26.96■■□□□ 1.91
PRKCH-223ENST00000557294 BCL11BQ9C0K0 894 aaPredicted RBP26.95■■□□□ 1.9
PRKCH-223ENST00000557294 ANO8Q9HCE9 1232 aaPredicted RBP26.95■■□□□ 1.9
PRKCH-223ENST00000557294 OVOS2A0A0G2JMS6 1433 aa26.95■■□□□ 1.9
PRKCH-223ENST00000557294 OVOS2A0A0J9YW53 1432 aa26.95■■□□□ 1.9
PRKCH-223ENST00000557294 OVOS2Q6IE36 1432 aa26.95■■□□□ 1.9
PRKCH-223ENST00000557294 NRKQ7Z2Y5 1582 aa26.95■■□□□ 1.9
PRKCH-223ENST00000557294 PARP4Q9UKK3 1724 aaKnown RBP26.93■■□□□ 1.9
PRKCH-223ENST00000557294 CRB1P82279 1406 aa26.93■■□□□ 1.9
PRKCH-223ENST00000557294 DDB1Q16531 1140 aa26.93■■□□□ 1.9
PRKCH-223ENST00000557294 PROM2Q8N271 834 aa26.93■■□□□ 1.9
PRKCH-223ENST00000557294 ZNF784Q8NCA9 323 aaPredicted RBP26.93■■□□□ 1.9
PRKCH-223ENST00000557294 PDGFDQ9GZP0 370 aaPredicted RBP26.93■■□□□ 1.9
PRKCH-223ENST00000557294 COL5A2P05997 1499 aaPredicted RBP26.93■■□□□ 1.9
PRKCH-223ENST00000557294 UTRNP46939 3433 aa26.91■■□□□ 1.9
PRKCH-223ENST00000557294 ZBTB7AO95365 584 aa26.9■■□□□ 1.9
PRKCH-223ENST00000557294 PTGER2P43116 358 aa26.9■■□□□ 1.9
PRKCH-223ENST00000557294 PTF1AQ7RTS3 328 aa26.9■■□□□ 1.9
PRKCH-223ENST00000557294 ARHGEF28Q8N1W1 1705 aaKnown RBP26.9■■□□□ 1.9
PRKCH-223ENST00000557294 PEAK1Q9H792 1746 aa26.89■■□□□ 1.9
PRKCH-223ENST00000557294 RGPD3A6NKT7 1758 aaPredicted RBP26.89■■□□□ 1.89
PRKCH-223ENST00000557294 RGPD4Q7Z3J3 1758 aa26.89■■□□□ 1.89
PRKCH-223ENST00000557294 ATF5Q9Y2D1 282 aaPredicted RBP26.87■■□□□ 1.89
PRKCH-223ENST00000557294 AATKQ6ZMQ8 1374 aa26.86■■□□□ 1.89
PRKCH-223ENST00000557294 CASZ1Q86V15 1759 aa26.86■■□□□ 1.89
PRKCH-223ENST00000557294 TOPAZ1Q8N9V7 1692 aa26.85■■□□□ 1.89
PRKCH-223ENST00000557294 TOM1L2Q6ZVM7 507 aa26.85■■□□□ 1.89
PRKCH-223ENST00000557294 SYT17Q9BSW7 474 aa26.85■■□□□ 1.89
PRKCH-223ENST00000557294 BRD4O60885 1362 aaPredicted RBP26.84■■□□□ 1.89
PRKCH-223ENST00000557294 MARCH10Q8NA82 808 aaPredicted RBP26.84■■□□□ 1.89
PRKCH-223ENST00000557294 CDCA7Q9BWT1 371 aaPredicted RBP26.84■■□□□ 1.89
PRKCH-223ENST00000557294 BCL9O00512 1426 aa26.83■■□□□ 1.89
PRKCH-223ENST00000557294 ZBTB7CA1YPR0 619 aa26.83■■□□□ 1.89
PRKCH-223ENST00000557294 RAB3GAP2Q9H2M9 1393 aa26.83■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms