RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 NRXN1Q9ULB1 1477 aa19.15■□□□□ 0.66
PSEN1-220ENST00000557037 STRN4Q9NRL3 753 aa19.14■□□□□ 0.65
PSEN1-220ENST00000557037 NRKQ7Z2Y5 1582 aa19.14■□□□□ 0.65
PSEN1-220ENST00000557037 PDE3BQ13370 1112 aa19.13■□□□□ 0.65
PSEN1-220ENST00000557037 PRDM11Q9NQV5 511 aa19.13■□□□□ 0.65
PSEN1-220ENST00000557037 USP35Q9P2H5 1018 aa19.13■□□□□ 0.65
PSEN1-220ENST00000557037 ABCC11Q96J66 1382 aa19.13■□□□□ 0.65
PSEN1-220ENST00000557037 RRBP1Q9P2E9 1410 aaKnown RBP19.13■□□□□ 0.65
PSEN1-220ENST00000557037 PDGFDQ9GZP0 370 aaPredicted RBP19.12■□□□□ 0.65
PSEN1-220ENST00000557037 IFT172Q9UG01 1749 aa19.11■□□□□ 0.65
PSEN1-220ENST00000557037 CEP350Q5VT06 3117 aa19.11■□□□□ 0.65
PSEN1-220ENST00000557037 ZBTB7AO95365 584 aa19.11■□□□□ 0.65
PSEN1-220ENST00000557037 CHD4Q14839 1912 aa19.1■□□□□ 0.65
PSEN1-220ENST00000557037 CHRNA2Q15822 529 aa19.09■□□□□ 0.65
PSEN1-220ENST00000557037 ANO8Q9HCE9 1232 aaPredicted RBP19.09■□□□□ 0.65
PSEN1-220ENST00000557037 MYOM1P52179 1685 aa19.08■□□□□ 0.65
PSEN1-220ENST00000557037 UTRNP46939 3433 aa19.08■□□□□ 0.65
PSEN1-220ENST00000557037 SAFB2Q14151 953 aaKnown RBP eCLIP19.08■□□□□ 0.64
PSEN1-220ENST00000557037 ATF5Q9Y2D1 282 aaPredicted RBP19.08■□□□□ 0.64
PSEN1-220ENST00000557037 GIGYF1O75420 1035 aaPredicted RBP19.07■□□□□ 0.64
PSEN1-220ENST00000557037 PTGER2P43116 358 aa19.07■□□□□ 0.64
PSEN1-220ENST00000557037 FHDC1Q9C0D6 1143 aaPredicted RBP19.07■□□□□ 0.64
PSEN1-220ENST00000557037 KNDC1Q76NI1 1749 aa19.07■□□□□ 0.64
PSEN1-220ENST00000557037 SYT17Q9BSW7 474 aa19.06■□□□□ 0.64
PSEN1-220ENST00000557037 YTHDC2Q9H6S0 1430 aaKnown RBP19.06■□□□□ 0.64
PSEN1-220ENST00000557037 TRPM3Q9HCF6 1732 aaPredicted RBP19.05■□□□□ 0.64
PSEN1-220ENST00000557037 CASZ1Q86V15 1759 aa19.05■□□□□ 0.64
PSEN1-220ENST00000557037 KIAA0232Q92628 1395 aa19.05■□□□□ 0.64
PSEN1-220ENST00000557037 ALS2Q96Q42 1657 aa19.04■□□□□ 0.64
PSEN1-220ENST00000557037 GPRASP1Q5JY77 1395 aa19.04■□□□□ 0.64
PSEN1-220ENST00000557037 RGL3Q3MIN7 710 aa19.03■□□□□ 0.64
PSEN1-220ENST00000557037 PAK3O75914 559 aaPredicted RBP19.02■□□□□ 0.64
PSEN1-220ENST00000557037 BARGINQ6ZT62 677 aa19.02■□□□□ 0.64
PSEN1-220ENST00000557037 EVA1CP58658 441 aa19.01■□□□□ 0.63
PSEN1-220ENST00000557037 BCL11BQ9C0K0 894 aaPredicted RBP19.01■□□□□ 0.63
PSEN1-220ENST00000557037 ACIN1Q9UKV3 1341 aaKnown RBP19■□□□□ 0.63
PSEN1-220ENST00000557037 ZC3H6P61129 1189 aaKnown RBP19■□□□□ 0.63
PSEN1-220ENST00000557037 SIRT1Q96EB6 747 aa19■□□□□ 0.63
PSEN1-220ENST00000557037 CRYBG1Q9Y4K1 1723 aa19■□□□□ 0.63
PSEN1-220ENST00000557037 PRAM1Q96QH2 718 aa18.99■□□□□ 0.63
PSEN1-220ENST00000557037 LARP1Q6PKG0 1096 aaKnown RBP18.98■□□□□ 0.63
PSEN1-220ENST00000557037 ANKARQ7Z5J8 1434 aa18.98■□□□□ 0.63
PSEN1-220ENST00000557037 PTF1AQ7RTS3 328 aa18.97■□□□□ 0.63
PSEN1-220ENST00000557037 TCP11L2Q8N4U5 519 aa18.97■□□□□ 0.63
PSEN1-220ENST00000557037 SSH2Q76I76 1423 aa18.97■□□□□ 0.63
PSEN1-220ENST00000557037 PLSCR1O15162 318 aa18.95■□□□□ 0.62
PSEN1-220ENST00000557037 GPR162Q16538 588 aa18.95■□□□□ 0.62
PSEN1-220ENST00000557037 ANKRD30BQ9BXX2 1392 aa18.94■□□□□ 0.62
PSEN1-220ENST00000557037 PIK3C2GO75747 1445 aa18.94■□□□□ 0.62
PSEN1-220ENST00000557037 NUTM2GQ5VZR2 741 aa18.94■□□□□ 0.62
PSEN1-220ENST00000557037 PROM2Q8N271 834 aa18.94■□□□□ 0.62
PSEN1-220ENST00000557037 NGDNQ8NEJ9 315 aaKnown RBP18.94■□□□□ 0.62
PSEN1-220ENST00000557037 HIRIP3Q9BW71 556 aaPredicted RBP18.94■□□□□ 0.62
PSEN1-220ENST00000557037 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
PSEN1-220ENST00000557037 POGKQ9P215 609 aa18.94■□□□□ 0.62
PSEN1-220ENST00000557037 DLC1Q96QB1 1528 aa18.94■□□□□ 0.62
PSEN1-220ENST00000557037 PRR36Q9H6K5 1346 aa18.93■□□□□ 0.62
PSEN1-220ENST00000557037 STK32BQ9NY57 414 aa18.92■□□□□ 0.62
PSEN1-220ENST00000557037 DHX57Q6P158 1386 aaKnown RBP18.91■□□□□ 0.62
PSEN1-220ENST00000557037 RGPD3A6NKT7 1758 aaPredicted RBP18.91■□□□□ 0.62
PSEN1-220ENST00000557037 RGPD4Q7Z3J3 1758 aa18.91■□□□□ 0.62
PSEN1-220ENST00000557037 ARXQ96QS3 562 aa18.9■□□□□ 0.62
PSEN1-220ENST00000557037 SGIP1Q9BQI5 828 aa18.9■□□□□ 0.62
PSEN1-220ENST00000557037 MTFR1LQ9H019 292 aa18.9■□□□□ 0.62
PSEN1-220ENST00000557037 OVOS2A0A0G2JMS6 1433 aa18.9■□□□□ 0.62
PSEN1-220ENST00000557037 OVOS2A0A0J9YW53 1432 aa18.9■□□□□ 0.62
PSEN1-220ENST00000557037 OVOS2Q6IE36 1432 aa18.9■□□□□ 0.62
PSEN1-220ENST00000557037 CFAP70Q5T0N1 1121 aa18.89■□□□□ 0.61
PSEN1-220ENST00000557037 PELP1Q8IZL8 1130 aaKnown RBP18.89■□□□□ 0.61
PSEN1-220ENST00000557037 C14orf93Q9H972 538 aaKnown RBP18.89■□□□□ 0.61
PSEN1-220ENST00000557037 SPATA31E1Q6ZUB1 1445 aa18.89■□□□□ 0.61
PSEN1-220ENST00000557037 C11orf95C9JLR9 678 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-220ENST00000557037 SLC15A2Q16348 729 aa18.88■□□□□ 0.61
PSEN1-220ENST00000557037 MINK1Q8N4C8 1332 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-220ENST00000557037 PHRF1Q9P1Y6 1649 aaKnown RBP18.88■□□□□ 0.61
PSEN1-220ENST00000557037 SBF2Q86WG5 1849 aa18.87■□□□□ 0.61
PSEN1-220ENST00000557037 PEAK1Q9H792 1746 aa18.87■□□□□ 0.61
PSEN1-220ENST00000557037 THRAP3Q9Y2W1 955 aaKnown RBP18.87■□□□□ 0.61
PSEN1-220ENST00000557037 PARP4Q9UKK3 1724 aaKnown RBP18.86■□□□□ 0.61
PSEN1-220ENST00000557037 TXNRD1Q16881 649 aa18.85■□□□□ 0.61
PSEN1-220ENST00000557037 KLHL34Q8N239 644 aa18.85■□□□□ 0.61
PSEN1-220ENST00000557037 SHANK3Q9BYB0 1731 aa18.85■□□□□ 0.61
PSEN1-220ENST00000557037 MAP3K5Q99683 1374 aa18.82■□□□□ 0.6
PSEN1-220ENST00000557037 DDB1Q16531 1140 aa18.82■□□□□ 0.6
PSEN1-220ENST00000557037 PPARGC1BQ86YN6 1023 aaKnown RBP18.82■□□□□ 0.6
PSEN1-220ENST00000557037 TULP4Q9NRJ4 1543 aa18.82■□□□□ 0.6
PSEN1-220ENST00000557037 EIF3AQ14152 1382 aaKnown RBP18.81■□□□□ 0.6
PSEN1-220ENST00000557037 WASLO00401 505 aaPredicted RBP18.81■□□□□ 0.6
PSEN1-220ENST00000557037 ATP7BP35670 1465 aa18.81■□□□□ 0.6
PSEN1-220ENST00000557037 TRAK1Q9UPV9 953 aa18.8■□□□□ 0.6
PSEN1-220ENST00000557037 LMO7Q8WWI1 1683 aa18.79■□□□□ 0.6
PSEN1-220ENST00000557037 HSPA6P17066 643 aa18.79■□□□□ 0.6
PSEN1-220ENST00000557037 MARCH10Q8NA82 808 aaPredicted RBP18.79■□□□□ 0.6
PSEN1-220ENST00000557037 ZBTB7CA1YPR0 619 aa18.78■□□□□ 0.6
PSEN1-220ENST00000557037 LRRC37A3O60309 1634 aa18.78■□□□□ 0.6
PSEN1-220ENST00000557037 COL5A2P05997 1499 aaPredicted RBP18.77■□□□□ 0.6
PSEN1-220ENST00000557037 CPDO75976 1380 aa18.77■□□□□ 0.6
PSEN1-220ENST00000557037 CRB1P82279 1406 aa18.76■□□□□ 0.59
PSEN1-220ENST00000557037 ABTB2Q8N961 1025 aa18.75■□□□□ 0.59
PSEN1-220ENST00000557037 NUDT16Q96DE0 195 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms