RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ARIH1Q9Y4X5 557 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-244ENST00000556898 LTBP4Q8N2S1 1624 aa8.01□□□□□ -1.13
ATXN3-244ENST00000556898 CDCA7LQ96GN5 454 aa8.01□□□□□ -1.13
ATXN3-244ENST00000556898 ABCC5O15440 1437 aa8.01□□□□□ -1.13
ATXN3-244ENST00000556898 ZNF518AQ6AHZ1 1483 aa8□□□□□ -1.13
ATXN3-244ENST00000556898 SYCP2Q9BX26 1530 aa8□□□□□ -1.13
ATXN3-244ENST00000556898 SPDYE16A6NNV3 312 aaPredicted RBP8□□□□□ -1.13
ATXN3-244ENST00000556898 PRSS12P56730 875 aa8□□□□□ -1.13
ATXN3-244ENST00000556898 NCOA1Q15788 1441 aa8□□□□□ -1.13
ATXN3-244ENST00000556898 ZNF335Q9H4Z2 1342 aaPredicted RBP8□□□□□ -1.13
ATXN3-244ENST00000556898 MBD5Q9P267 1494 aa8□□□□□ -1.13
ATXN3-244ENST00000556898 ABCC1P33527 1531 aa7.99□□□□□ -1.13
ATXN3-244ENST00000556898 PREX1Q8TCU6 1659 aa7.99□□□□□ -1.13
ATXN3-244ENST00000556898 DAPK1P53355 1430 aa7.99□□□□□ -1.13
ATXN3-244ENST00000556898 SAMD7Q7Z3H4 446 aa7.99□□□□□ -1.13
ATXN3-244ENST00000556898 SIGLEC1Q9BZZ2 1709 aa7.99□□□□□ -1.13
ATXN3-244ENST00000556898 CNTLNQ9NXG0 1405 aa7.99□□□□□ -1.13
ATXN3-244ENST00000556898 FER1L4A9Z1Z3 1794 aa7.99□□□□□ -1.13
ATXN3-244ENST00000556898 STRCQ7RTU9 1775 aa7.99□□□□□ -1.13
ATXN3-244ENST00000556898 SETD1BQ9UPS6 1966 aaKnown RBP7.99□□□□□ -1.13
ATXN3-244ENST00000556898 ZMYM3Q14202 1370 aa7.98□□□□□ -1.13
ATXN3-244ENST00000556898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.98□□□□□ -1.13
ATXN3-244ENST00000556898 GRXCR2A6NFK2 248 aa7.98□□□□□ -1.13
ATXN3-244ENST00000556898 PPP4CP60510 307 aa7.98□□□□□ -1.13
ATXN3-244ENST00000556898 E2F4Q16254 413 aa7.98□□□□□ -1.13
ATXN3-244ENST00000556898 TJAP1Q5JTD0 557 aa7.98□□□□□ -1.13
ATXN3-244ENST00000556898 CDHR5Q9HBB8 845 aa7.98□□□□□ -1.13
ATXN3-244ENST00000556898 RRP7BPQ9NSQ0 103 aa7.98□□□□□ -1.13
ATXN3-244ENST00000556898 MLH3Q9UHC1 1453 aa7.98□□□□□ -1.13
ATXN3-244ENST00000556898 DNMT1P26358 1616 aaKnown RBP7.97□□□□□ -1.13
ATXN3-244ENST00000556898 TOM1O60784 492 aa7.97□□□□□ -1.13
ATXN3-244ENST00000556898 OSBPP22059 807 aa7.97□□□□□ -1.13
ATXN3-244ENST00000556898 HSPA1LP34931 641 aa7.97□□□□□ -1.13
ATXN3-244ENST00000556898 NPATQ14207 1427 aa7.96□□□□□ -1.13
ATXN3-244ENST00000556898 LCE2BO14633 110 aa7.96□□□□□ -1.14
ATXN3-244ENST00000556898 TATDN2Q93075 761 aa7.96□□□□□ -1.14
ATXN3-244ENST00000556898 AGLP35573 1532 aa7.96□□□□□ -1.14
ATXN3-244ENST00000556898 KIAA1107Q9UPP5 1409 aa7.95□□□□□ -1.14
ATXN3-244ENST00000556898 CCDC141Q6ZP82 1450 aa7.95□□□□□ -1.14
ATXN3-244ENST00000556898 PIP4K2BP78356 416 aa7.95□□□□□ -1.14
ATXN3-244ENST00000556898 PNMA3Q9UL41 463 aa7.95□□□□□ -1.14
ATXN3-244ENST00000556898 ARHGEF5Q12774 1597 aa7.95□□□□□ -1.14
ATXN3-244ENST00000556898 PLEKHH2Q8IVE3 1493 aa7.94□□□□□ -1.14
ATXN3-244ENST00000556898 REREQ9P2R6 1566 aa7.94□□□□□ -1.14
ATXN3-244ENST00000556898 Q6ZNB5 142 aa7.94□□□□□ -1.14
ATXN3-244ENST00000556898 CROCC2H7BZ55 1655 aa7.94□□□□□ -1.14
ATXN3-244ENST00000556898 KDM5CP41229 1560 aa7.93□□□□□ -1.14
ATXN3-244ENST00000556898 TSPY4P0CV99 314 aa7.93□□□□□ -1.14
ATXN3-244ENST00000556898 TSPY10P0CW01 314 aa7.93□□□□□ -1.14
ATXN3-244ENST00000556898 NUDT18Q6ZVK8 323 aa7.93□□□□□ -1.14
ATXN3-244ENST00000556898 ZNF516Q92618 1163 aa7.93□□□□□ -1.14
ATXN3-244ENST00000556898 MTRQ99707 1265 aa7.93□□□□□ -1.14
ATXN3-244ENST00000556898 WDR70Q9NW82 654 aa7.93□□□□□ -1.14
ATXN3-244ENST00000556898 SPAG9O60271 1321 aaKnown RBP7.93□□□□□ -1.14
ATXN3-244ENST00000556898 CAMSAP1Q5T5Y3 1602 aa7.92□□□□□ -1.14
ATXN3-244ENST00000556898 GGT6Q6P531 493 aa7.92□□□□□ -1.14
ATXN3-244ENST00000556898 NPDC1Q9NQX5 325 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-244ENST00000556898 NAIPQ13075 1403 aa7.92□□□□□ -1.14
ATXN3-244ENST00000556898 DIP2CQ9Y2E4 1556 aa7.92□□□□□ -1.14
ATXN3-244ENST00000556898 APLP1P51693 650 aa7.91□□□□□ -1.14
ATXN3-244ENST00000556898 RSPH4AQ5TD94 716 aa7.91□□□□□ -1.14
ATXN3-244ENST00000556898 RAB3GAP2Q9H2M9 1393 aa7.91□□□□□ -1.14
ATXN3-244ENST00000556898 SETD5Q9C0A6 1442 aa7.91□□□□□ -1.14
ATXN3-244ENST00000556898 ADGRL2O95490 1459 aa7.91□□□□□ -1.14
ATXN3-244ENST00000556898 PLA2R1Q13018 1463 aa7.91□□□□□ -1.14
ATXN3-244ENST00000556898 SHANK2Q9UPX8 1470 aa7.91□□□□□ -1.14
ATXN3-244ENST00000556898 MAST1Q9Y2H9 1570 aa7.91□□□□□ -1.14
ATXN3-244ENST00000556898 ADGBQ8N7X0 1667 aa7.9□□□□□ -1.14
ATXN3-244ENST00000556898 HFM1A2PYH4 1435 aa7.9□□□□□ -1.14
ATXN3-244ENST00000556898 ANKRD30AQ9BXX3 1397 aa7.9□□□□□ -1.14
ATXN3-244ENST00000556898 NBPF26B4DH59 902 aa7.9□□□□□ -1.14
ATXN3-244ENST00000556898 PPP1R18Q6NYC8 613 aa7.9□□□□□ -1.14
ATXN3-244ENST00000556898 TTC13Q8NBP0 860 aa7.9□□□□□ -1.14
ATXN3-244ENST00000556898 NKX2-3Q8TAU0 364 aa7.9□□□□□ -1.14
ATXN3-244ENST00000556898 KCNV2Q8TDN2 545 aa7.9□□□□□ -1.14
ATXN3-244ENST00000556898 C3P01024 1663 aa7.89□□□□□ -1.15
ATXN3-244ENST00000556898 INO80Q9ULG1 1556 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-244ENST00000556898 ATP7AQ04656 1500 aa7.89□□□□□ -1.15
ATXN3-244ENST00000556898 ROCK1Q13464 1354 aa7.89□□□□□ -1.15
ATXN3-244ENST00000556898 KIF15Q9NS87 1388 aa7.89□□□□□ -1.15
ATXN3-244ENST00000556898 ANKLE2Q86XL3 938 aa7.89□□□□□ -1.15
ATXN3-244ENST00000556898 PRKD2Q9BZL6 878 aa7.89□□□□□ -1.15
ATXN3-244ENST00000556898 GFRA3O60609 400 aa7.88□□□□□ -1.15
ATXN3-244ENST00000556898 THEMISQ8N1K5 641 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-244ENST00000556898 IL21Q9HBE4 155 aa7.88□□□□□ -1.15
ATXN3-244ENST00000556898 KIDINS220Q9ULH0 1771 aa7.88□□□□□ -1.15
ATXN3-244ENST00000556898 GCC2Q8IWJ2 1684 aa7.88□□□□□ -1.15
ATXN3-244ENST00000556898 ABCA6Q8N139 1617 aa7.88□□□□□ -1.15
ATXN3-244ENST00000556898 RTEL1-TNFRSF6BF6WH68 1400 aa7.87□□□□□ -1.15
ATXN3-244ENST00000556898 PADI6Q6TGC4 694 aa7.87□□□□□ -1.15
ATXN3-244ENST00000556898 ANKRD50Q9ULJ7 1429 aa7.86□□□□□ -1.15
ATXN3-244ENST00000556898 PLXNC1O60486 1568 aa7.86□□□□□ -1.15
ATXN3-244ENST00000556898 RNF40O75150 1001 aa7.86□□□□□ -1.15
ATXN3-244ENST00000556898 SWT1Q5T5J6 900 aaKnown RBP7.86□□□□□ -1.15
ATXN3-244ENST00000556898 ARHGEF1Q92888 912 aaKnown RBP7.86□□□□□ -1.15
ATXN3-244ENST00000556898 RBM27Q9P2N5 1060 aaKnown RBP7.86□□□□□ -1.15
ATXN3-244ENST00000556898 CPS1P31327 1500 aa7.85□□□□□ -1.15
ATXN3-244ENST00000556898 FBXO31Q5XUX0 539 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-244ENST00000556898 TRIM52Q96A61 297 aa7.85□□□□□ -1.15
ATXN3-244ENST00000556898 A2MP01023 1474 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms