RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 SLC24A3Q9HC58 644 aa9.62□□□□□ -0.87
TMEM260-212ENST00000556810 TTC24A2A3L6 582 aaPredicted RBP9.61□□□□□ -0.87
TMEM260-212ENST00000556810 GJA5P36382 358 aa9.61□□□□□ -0.87
TMEM260-212ENST00000556810 AQRO60306 1485 aaKnown RBP eCLIP9.6□□□□□ -0.87
TMEM260-212ENST00000556810 ABCC8Q09428 1581 aa9.6□□□□□ -0.87
TMEM260-212ENST00000556810 ST8SIA5O15466 376 aa9.6□□□□□ -0.87
TMEM260-212ENST00000556810 MTMR2Q13614 643 aa9.6□□□□□ -0.87
TMEM260-212ENST00000556810 RSBN1LQ6PCB5 846 aaPredicted RBP9.6□□□□□ -0.87
TMEM260-212ENST00000556810 PRR7Q8TB68 274 aa9.6□□□□□ -0.87
TMEM260-212ENST00000556810 MRGPRX2Q96LB1 330 aa9.6□□□□□ -0.87
TMEM260-212ENST00000556810 AAASQ9NRG9 546 aa9.6□□□□□ -0.87
TMEM260-212ENST00000556810 EIF4G3O43432 1585 aaKnown RBP9.59□□□□□ -0.87
TMEM260-212ENST00000556810 SPDYE5A6NIY4 337 aa9.59□□□□□ -0.87
TMEM260-212ENST00000556810 AVPP01185 164 aa9.59□□□□□ -0.87
TMEM260-212ENST00000556810 CCNYL3P0C7X3 344 aa9.59□□□□□ -0.87
TMEM260-212ENST00000556810 WNT7BP56706 349 aa9.59□□□□□ -0.87
TMEM260-212ENST00000556810 SKOR1P84550 965 aa9.59□□□□□ -0.87
TMEM260-212ENST00000556810 PTCRAQ6ISU1 281 aaPredicted RBP9.59□□□□□ -0.87
TMEM260-212ENST00000556810 SNIP1Q8TAD8 396 aaKnown RBP9.59□□□□□ -0.87
TMEM260-212ENST00000556810 CHD1O14646 1710 aa9.59□□□□□ -0.87
TMEM260-212ENST00000556810 SPTLC1O15269 473 aa9.58□□□□□ -0.88
TMEM260-212ENST00000556810 PTPRNQ16849 979 aa9.58□□□□□ -0.88
TMEM260-212ENST00000556810 RC3H1Q5TC82 1133 aaKnown RBP9.58□□□□□ -0.88
TMEM260-212ENST00000556810 CRIPAKQ8N1N5 446 aa9.57□□□□□ -0.88
TMEM260-212ENST00000556810 DNMBPQ6XZF7 1577 aa9.57□□□□□ -0.88
TMEM260-212ENST00000556810 TOP2BQ02880 1626 aa9.56□□□□□ -0.88
TMEM260-212ENST00000556810 TARBP1Q13395 1621 aaKnown RBP9.56□□□□□ -0.88
TMEM260-212ENST00000556810 DESI1Q6ICB0 168 aa9.56□□□□□ -0.88
TMEM260-212ENST00000556810 PCDHB15Q9Y5E8 787 aa9.56□□□□□ -0.88
TMEM260-212ENST00000556810 BIVM-ERCC5R4GMW8 1640 aa9.56□□□□□ -0.88
TMEM260-212ENST00000556810 ARAP1Q96P48 1450 aa9.55□□□□□ -0.88
TMEM260-212ENST00000556810 SMPD1P17405 629 aa9.55□□□□□ -0.88
TMEM260-212ENST00000556810 CTC1Q2NKJ3 1217 aa9.55□□□□□ -0.88
TMEM260-212ENST00000556810 RIC3Q7Z5B4 369 aa9.55□□□□□ -0.88
TMEM260-212ENST00000556810 EVA1BQ9NVM1 165 aa9.55□□□□□ -0.88
TMEM260-212ENST00000556810 POTECB2RU33 542 aa9.54□□□□□ -0.88
TMEM260-212ENST00000556810 AXIN1O15169 862 aa9.54□□□□□ -0.88
TMEM260-212ENST00000556810 ZBTB3Q9H5J0 574 aa9.54□□□□□ -0.88
TMEM260-212ENST00000556810 J3QL48 77 aa9.53□□□□□ -0.88
TMEM260-212ENST00000556810 HRCP23327 699 aa9.53□□□□□ -0.88
TMEM260-212ENST00000556810 SMCPP49901 116 aaPredicted RBP9.53□□□□□ -0.88
TMEM260-212ENST00000556810 KCNH2Q12809 1159 aa9.53□□□□□ -0.88
TMEM260-212ENST00000556810 UNC93B1Q9H1C4 597 aa9.53□□□□□ -0.88
TMEM260-212ENST00000556810 CFAP99D6REC4 459 aa9.52□□□□□ -0.89
TMEM260-212ENST00000556810 CSPP1Q1MSJ5 1256 aa9.52□□□□□ -0.89
TMEM260-212ENST00000556810 TPRNQ4KMQ1 711 aa9.52□□□□□ -0.89
TMEM260-212ENST00000556810 PRPF38BQ5VTL8 546 aaKnown RBP9.52□□□□□ -0.89
TMEM260-212ENST00000556810 MYSM1Q5VVJ2 828 aa9.52□□□□□ -0.89
TMEM260-212ENST00000556810 POLA1P09884 1462 aaPredicted RBP9.52□□□□□ -0.89
TMEM260-212ENST00000556810 TDRD9Q8NDG6 1382 aaKnown RBP9.51□□□□□ -0.89
TMEM260-212ENST00000556810 SYNJ1O43426 1573 aa9.51□□□□□ -0.89
TMEM260-212ENST00000556810 SH3BP2P78314 561 aa9.51□□□□□ -0.89
TMEM260-212ENST00000556810 FAM9AQ8IZU1 332 aaPredicted RBP9.51□□□□□ -0.89
TMEM260-212ENST00000556810 EHBP1Q8NDI1 1231 aa9.51□□□□□ -0.89
TMEM260-212ENST00000556810 CABLES1Q8TDN4 633 aa9.51□□□□□ -0.89
TMEM260-212ENST00000556810 DACH1Q9UI36 760 aa9.51□□□□□ -0.89
TMEM260-212ENST00000556810 RAD54L2Q9Y4B4 1467 aa9.51□□□□□ -0.89
TMEM260-212ENST00000556810 SOGA1O94964 1423 aa9.5□□□□□ -0.89
TMEM260-212ENST00000556810 LYPD8Q6UX82 237 aa9.5□□□□□ -0.89
TMEM260-212ENST00000556810 LIMD1Q9UGP4 676 aa9.5□□□□□ -0.89
TMEM260-212ENST00000556810 LOC105371045A0A1W2PR82 267 aa9.49□□□□□ -0.89
TMEM260-212ENST00000556810 LINC01559Q495D7 138 aa9.49□□□□□ -0.89
TMEM260-212ENST00000556810 CHMP7Q8WUX9 453 aaPredicted RBP9.49□□□□□ -0.89
TMEM260-212ENST00000556810 ZNF775Q96BV0 537 aaPredicted RBP9.49□□□□□ -0.89
TMEM260-212ENST00000556810 SIAH2O43255 324 aa9.48□□□□□ -0.89
TMEM260-212ENST00000556810 ALDH1A1P00352 501 aa9.48□□□□□ -0.89
TMEM260-212ENST00000556810 TUSC1Q2TAM9 212 aa9.48□□□□□ -0.89
TMEM260-212ENST00000556810 BAP1Q92560 729 aa9.48□□□□□ -0.89
TMEM260-212ENST00000556810 HPS1Q92902 700 aa9.48□□□□□ -0.89
TMEM260-212ENST00000556810 CTHP32929 405 aa9.47□□□□□ -0.89
TMEM260-212ENST00000556810 QPCTQ16769 361 aa9.47□□□□□ -0.89
TMEM260-212ENST00000556810 NUTM2BA6NNL0 878 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-212ENST00000556810 NUTM2EB1AL46 878 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-212ENST00000556810 NUTM2DQ5VT03 806 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-212ENST00000556810 NUTM2AQ8IVF1 878 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-212ENST00000556810 ZNF511Q8NB15 262 aa9.46□□□□□ -0.9
TMEM260-212ENST00000556810 GMPR2Q9P2T1 348 aaKnown RBP9.46□□□□□ -0.9
TMEM260-212ENST00000556810 SNAPC4Q5SXM2 1469 aa9.46□□□□□ -0.9
TMEM260-212ENST00000556810 LILRB3O75022 631 aa9.45□□□□□ -0.9
TMEM260-212ENST00000556810 CLK2P49760 499 aaKnown RBP9.45□□□□□ -0.9
TMEM260-212ENST00000556810 RSPH6AQ9H0K4 717 aa9.45□□□□□ -0.9
TMEM260-212ENST00000556810 F12P00748 615 aaPredicted RBP9.44□□□□□ -0.9
TMEM260-212ENST00000556810 TSC1Q92574 1164 aa9.44□□□□□ -0.9
TMEM260-212ENST00000556810 MAP10Q9P2G4 905 aa9.44□□□□□ -0.9
TMEM260-212ENST00000556810 CUX1P39880 1505 aa9.44□□□□□ -0.9
TMEM260-212ENST00000556810 CLASP1Q7Z460 1538 aa9.44□□□□□ -0.9
TMEM260-212ENST00000556810 FGD5Q6ZNL6 1462 aa9.43□□□□□ -0.9
TMEM260-212ENST00000556810 KIF27Q86VH2 1401 aa9.43□□□□□ -0.9
TMEM260-212ENST00000556810 ATP13A2Q9NQ11 1180 aa9.43□□□□□ -0.9
TMEM260-212ENST00000556810 WASF2Q9Y6W5 498 aa9.43□□□□□ -0.9
TMEM260-212ENST00000556810 KIF21BO75037 1637 aa9.42□□□□□ -0.9
TMEM260-212ENST00000556810 GOLGA3Q08378 1498 aa9.42□□□□□ -0.9
TMEM260-212ENST00000556810 C11orf95C9JLR9 678 aaPredicted RBP9.42□□□□□ -0.9
TMEM260-212ENST00000556810 PER1O15534 1290 aaPredicted RBP9.42□□□□□ -0.9
TMEM260-212ENST00000556810 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
TMEM260-212ENST00000556810 GRIN2BQ13224 1484 aa9.41□□□□□ -0.9
TMEM260-212ENST00000556810 MAGI1Q96QZ7 1491 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-212ENST00000556810 VARSP26640 1264 aaKnown RBP9.41□□□□□ -0.9
TMEM260-212ENST00000556810 RTL5Q5HYW3 569 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-212ENST00000556810 TLL2Q9Y6L7 1015 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms