RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 CSPP1Q1MSJ5 1256 aa7.59□□□□□ -1.19
ATXN3-237ENST00000556274 PDZRN3Q9UPQ7 1066 aa7.59□□□□□ -1.19
ATXN3-237ENST00000556274 RAPGEF2Q9Y4G8 1499 aa7.59□□□□□ -1.19
ATXN3-237ENST00000556274 UBTFP17480 764 aaKnown RBP7.58□□□□□ -1.2
ATXN3-237ENST00000556274 GJA5P36382 358 aa7.58□□□□□ -1.2
ATXN3-237ENST00000556274 CLK2P49760 499 aaKnown RBP7.58□□□□□ -1.2
ATXN3-237ENST00000556274 Q3C1V9 767 aa7.58□□□□□ -1.2
ATXN3-237ENST00000556274 LIMD1Q9UGP4 676 aa7.58□□□□□ -1.2
ATXN3-237ENST00000556274 PCDHGC3Q9UN70 934 aa7.58□□□□□ -1.2
ATXN3-237ENST00000556274 NUP160Q12769 1436 aa7.58□□□□□ -1.2
ATXN3-237ENST00000556274 FMNL1O95466 1100 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-237ENST00000556274 PPP1R18Q6NYC8 613 aa7.57□□□□□ -1.2
ATXN3-237ENST00000556274 PROCA1Q8NCQ7 364 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-237ENST00000556274 PCMTD1Q96MG8 357 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-237ENST00000556274 GOPCQ9HD26 462 aa7.57□□□□□ -1.2
ATXN3-237ENST00000556274 PCDHB15Q9Y5E8 787 aa7.57□□□□□ -1.2
ATXN3-237ENST00000556274 SHROOM2Q13796 1616 aa7.56□□□□□ -1.2
ATXN3-237ENST00000556274 ARAP1Q96P48 1450 aa7.56□□□□□ -1.2
ATXN3-237ENST00000556274 C6orf229H3BNL8 230 aa7.56□□□□□ -1.2
ATXN3-237ENST00000556274 TMEM132AQ24JP5 1023 aa7.56□□□□□ -1.2
ATXN3-237ENST00000556274 SYMPKQ92797 1274 aaKnown RBP7.56□□□□□ -1.2
ATXN3-237ENST00000556274 KIAA0586Q9BVV6 1533 aa7.56□□□□□ -1.2
ATXN3-237ENST00000556274 IQGAP2Q13576 1575 aa7.55□□□□□ -1.2
ATXN3-237ENST00000556274 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-237ENST00000556274 BRICD5Q6PL45 260 aa7.55□□□□□ -1.2
ATXN3-237ENST00000556274 RNF19BQ6ZMZ0 732 aa7.55□□□□□ -1.2
ATXN3-237ENST00000556274 NKX2-3Q8TAU0 364 aa7.55□□□□□ -1.2
ATXN3-237ENST00000556274 THAP11Q96EK4 314 aa7.55□□□□□ -1.2
ATXN3-237ENST00000556274 SALL2Q9Y467 1007 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-237ENST00000556274 NUTM2BA6NNL0 878 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-237ENST00000556274 NUTM2EB1AL46 878 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-237ENST00000556274 TLL1O43897 1013 aa7.54□□□□□ -1.2
ATXN3-237ENST00000556274 NUTM2DQ5VT03 806 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-237ENST00000556274 NUTM2AQ8IVF1 878 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-237ENST00000556274 SPSB2Q99619 263 aa7.54□□□□□ -1.2
ATXN3-237ENST00000556274 CARMIL2Q6F5E8 1435 aa7.53□□□□□ -1.2
ATXN3-237ENST00000556274 POTECB2RU33 542 aa7.53□□□□□ -1.2
ATXN3-237ENST00000556274 HRCP23327 699 aa7.53□□□□□ -1.2
ATXN3-237ENST00000556274 MTMR2Q13614 643 aa7.53□□□□□ -1.2
ATXN3-237ENST00000556274 QPCTQ16769 361 aa7.53□□□□□ -1.2
ATXN3-237ENST00000556274 TUSC1Q2TAM9 212 aa7.53□□□□□ -1.2
ATXN3-237ENST00000556274 CABLES1Q8TDN4 633 aa7.53□□□□□ -1.2
ATXN3-237ENST00000556274 USB1Q9BQ65 265 aaKnown RBP7.53□□□□□ -1.2
ATXN3-237ENST00000556274 ZBTB3Q9H5J0 574 aa7.53□□□□□ -1.2
ATXN3-237ENST00000556274 TSPOAP1O95153 1857 aa7.53□□□□□ -1.2
ATXN3-237ENST00000556274 EEA1Q15075 1411 aa7.52□□□□□ -1.2
ATXN3-237ENST00000556274 ADH1BP00325 375 aa7.52□□□□□ -1.21
ATXN3-237ENST00000556274 PRPF38BQ5VTL8 546 aaKnown RBP7.52□□□□□ -1.21
ATXN3-237ENST00000556274 SPDYE5A6NIY4 337 aa7.51□□□□□ -1.21
ATXN3-237ENST00000556274 LILRB3O75022 631 aa7.51□□□□□ -1.21
ATXN3-237ENST00000556274 RETREG3Q86VR2 466 aa7.51□□□□□ -1.21
ATXN3-237ENST00000556274 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.51□□□□□ -1.21
ATXN3-237ENST00000556274 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.51□□□□□ -1.21
ATXN3-237ENST00000556274 PTPRGP23470 1445 aa7.51□□□□□ -1.21
ATXN3-237ENST00000556274 PRXQ9BXM0 1461 aa7.5□□□□□ -1.21
ATXN3-237ENST00000556274 ARID3CA6NKF2 412 aa7.5□□□□□ -1.21
ATXN3-237ENST00000556274 RTL5Q5HYW3 569 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-237ENST00000556274 FAM160A2Q8N612 972 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-237ENST00000556274 PRR7Q8TB68 274 aa7.5□□□□□ -1.21
ATXN3-237ENST00000556274 SLC6A16Q9GZN6 736 aa7.5□□□□□ -1.21
ATXN3-237ENST00000556274 TREML4Q6UXN2 200 aa7.49□□□□□ -1.21
ATXN3-237ENST00000556274 TNIKQ9UKE5 1360 aa7.48□□□□□ -1.21
ATXN3-237ENST00000556274 S1PR4O95977 384 aa7.48□□□□□ -1.21
ATXN3-237ENST00000556274 MYT1Q01538 1121 aa7.48□□□□□ -1.21
ATXN3-237ENST00000556274 MSS51Q4VC12 460 aa7.48□□□□□ -1.21
ATXN3-237ENST00000556274 TRIM67Q6ZTA4 783 aa7.48□□□□□ -1.21
ATXN3-237ENST00000556274 TSC1Q92574 1164 aa7.48□□□□□ -1.21
ATXN3-237ENST00000556274 KIF21BO75037 1637 aa7.48□□□□□ -1.21
ATXN3-237ENST00000556274 LOC100996750A0A140TA64 210 aa7.47□□□□□ -1.21
ATXN3-237ENST00000556274 CFAP99D6REC4 459 aa7.47□□□□□ -1.21
ATXN3-237ENST00000556274 GGCXP38435 758 aa7.47□□□□□ -1.21
ATXN3-237ENST00000556274 FBXO31Q5XUX0 539 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-237ENST00000556274 PPP2R2DQ66LE6 453 aa7.47□□□□□ -1.21
ATXN3-237ENST00000556274 KRTAP4-6Q9BYQ5 205 aa7.47□□□□□ -1.21
ATXN3-237ENST00000556274 PRDM9Q9NQV7 894 aa7.47□□□□□ -1.21
ATXN3-237ENST00000556274 GOLGA3Q08378 1498 aa7.47□□□□□ -1.21
ATXN3-237ENST00000556274 KIAA0556O60303 1618 aa7.46□□□□□ -1.21
ATXN3-237ENST00000556274 ADCY10Q96PN6 1610 aa7.46□□□□□ -1.21
ATXN3-237ENST00000556274 LOC105371045A0A1W2PR82 267 aa7.46□□□□□ -1.22
ATXN3-237ENST00000556274 RFC5P40937 340 aa7.46□□□□□ -1.22
ATXN3-237ENST00000556274 UGGT2Q9NYU1 1516 aa7.46□□□□□ -1.22
ATXN3-237ENST00000556274 KIF13AQ9H1H9 1805 aa7.45□□□□□ -1.22
ATXN3-237ENST00000556274 JUNDP17535 347 aa7.45□□□□□ -1.22
ATXN3-237ENST00000556274 DISP1Q96F81 1524 aa7.45□□□□□ -1.22
ATXN3-237ENST00000556274 PPEF1O14829 653 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-237ENST00000556274 AP1G2O75843 785 aa7.44□□□□□ -1.22
ATXN3-237ENST00000556274 DXOO77932 396 aaKnown RBP7.44□□□□□ -1.22
ATXN3-237ENST00000556274 MMP16P51512 607 aa7.44□□□□□ -1.22
ATXN3-237ENST00000556274 FAM69CQ0P6D2 419 aa7.44□□□□□ -1.22
ATXN3-237ENST00000556274 HELBQ8NG08 1087 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-237ENST00000556274 RNF223E7ERA6 249 aa7.43□□□□□ -1.22
ATXN3-237ENST00000556274 DESI1Q6ICB0 168 aa7.43□□□□□ -1.22
ATXN3-237ENST00000556274 UACAQ9BZF9 1416 aa7.43□□□□□ -1.22
ATXN3-237ENST00000556274 ZCCHC11Q5TAX3 1644 aaKnown RBP7.42□□□□□ -1.22
ATXN3-237ENST00000556274 CTDSPL2Q05D32 466 aa7.42□□□□□ -1.22
ATXN3-237ENST00000556274 TMEM259Q4ZIN3 620 aa7.42□□□□□ -1.22
ATXN3-237ENST00000556274 PKDCCQ504Y2 493 aa7.42□□□□□ -1.22
ATXN3-237ENST00000556274 DGAT1O75907 488 aa7.41□□□□□ -1.22
ATXN3-237ENST00000556274 LYPD8Q6UX82 237 aa7.41□□□□□ -1.22
ATXN3-237ENST00000556274 CCDC24Q8N4L8 307 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms