RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 NBPF8Q3BBV2 869 aa20.22■□□□□ 0.83
ABCD4-224ENST00000556119 NBPF14Q5TI25 921 aa20.22■□□□□ 0.83
ABCD4-224ENST00000556119 TRPM3Q9HCF6 1732 aaPredicted RBP20.19■□□□□ 0.82
ABCD4-224ENST00000556119 CEP350Q5VT06 3117 aa20.18■□□□□ 0.82
ABCD4-224ENST00000556119 ALS2Q96Q42 1657 aa20.18■□□□□ 0.82
ABCD4-224ENST00000556119 SPATA31A1Q5TZJ5 1347 aa20.18■□□□□ 0.82
ABCD4-224ENST00000556119 RRBP1Q9P2E9 1410 aaKnown RBP20.18■□□□□ 0.82
ABCD4-224ENST00000556119 PMFBP1Q8TBY8 1022 aa20.17■□□□□ 0.82
ABCD4-224ENST00000556119 CRYBG1Q9Y4K1 1723 aa20.16■□□□□ 0.82
ABCD4-224ENST00000556119 YTHDC2Q9H6S0 1430 aaKnown RBP20.16■□□□□ 0.82
ABCD4-224ENST00000556119 C1QTNF8P60827 252 aa20.15■□□□□ 0.82
ABCD4-224ENST00000556119 SIRT1Q96EB6 747 aa20.15■□□□□ 0.82
ABCD4-224ENST00000556119 CHD4Q14839 1912 aa20.14■□□□□ 0.81
ABCD4-224ENST00000556119 RGL3Q3MIN7 710 aa20.1■□□□□ 0.81
ABCD4-224ENST00000556119 PRDM11Q9NQV5 511 aa20.1■□□□□ 0.81
ABCD4-224ENST00000556119 NRKQ7Z2Y5 1582 aa20.09■□□□□ 0.81
ABCD4-224ENST00000556119 CASZ1Q86V15 1759 aa20.09■□□□□ 0.81
ABCD4-224ENST00000556119 PDE3BQ13370 1112 aa20.09■□□□□ 0.81
ABCD4-224ENST00000556119 PIK3C2GO75747 1445 aa20.09■□□□□ 0.81
ABCD4-224ENST00000556119 SAFB2Q14151 953 aaKnown RBP eCLIP20.07■□□□□ 0.8
ABCD4-224ENST00000556119 STRN4Q9NRL3 753 aa20.07■□□□□ 0.8
ABCD4-224ENST00000556119 ANKARQ7Z5J8 1434 aa20.07■□□□□ 0.8
ABCD4-224ENST00000556119 ANKRD30BQ9BXX2 1392 aa20.07■□□□□ 0.8
ABCD4-224ENST00000556119 CHRNA2Q15822 529 aa20.06■□□□□ 0.8
ABCD4-224ENST00000556119 USP35Q9P2H5 1018 aa20.06■□□□□ 0.8
ABCD4-224ENST00000556119 MYOM1P52179 1685 aa20.06■□□□□ 0.8
ABCD4-224ENST00000556119 SPATA31E1Q6ZUB1 1445 aa20.05■□□□□ 0.8
ABCD4-224ENST00000556119 BARGINQ6ZT62 677 aa20.05■□□□□ 0.8
ABCD4-224ENST00000556119 SLC4A1APQ9BWU0 796 aaKnown RBP20.05■□□□□ 0.8
ABCD4-224ENST00000556119 PDGFDQ9GZP0 370 aaPredicted RBP20.05■□□□□ 0.8
ABCD4-224ENST00000556119 GPRASP1Q5JY77 1395 aa20.05■□□□□ 0.8
ABCD4-224ENST00000556119 KIAA0232Q92628 1395 aa20.05■□□□□ 0.8
ABCD4-224ENST00000556119 ACIN1Q9UKV3 1341 aaKnown RBP20.04■□□□□ 0.8
ABCD4-224ENST00000556119 PRAM1Q96QH2 718 aa20.04■□□□□ 0.8
ABCD4-224ENST00000556119 PTGER2P43116 358 aa20.03■□□□□ 0.8
ABCD4-224ENST00000556119 ANO8Q9HCE9 1232 aaPredicted RBP20.03■□□□□ 0.8
ABCD4-224ENST00000556119 C14orf93Q9H972 538 aaKnown RBP20.02■□□□□ 0.8
ABCD4-224ENST00000556119 RGPD3A6NKT7 1758 aaPredicted RBP20.01■□□□□ 0.79
ABCD4-224ENST00000556119 RGPD4Q7Z3J3 1758 aa20.01■□□□□ 0.79
ABCD4-224ENST00000556119 GOLGB1Q14789 3259 aaKnown RBP20.01■□□□□ 0.79
ABCD4-224ENST00000556119 ZBTB7AO95365 584 aa20.01■□□□□ 0.79
ABCD4-224ENST00000556119 SBF2Q86WG5 1849 aa20.01■□□□□ 0.79
ABCD4-224ENST00000556119 PAK3O75914 559 aaPredicted RBP20■□□□□ 0.79
ABCD4-224ENST00000556119 SYT17Q9BSW7 474 aa20■□□□□ 0.79
ABCD4-224ENST00000556119 PHRF1Q9P1Y6 1649 aaKnown RBP20■□□□□ 0.79
ABCD4-224ENST00000556119 PRR36Q9H6K5 1346 aa20■□□□□ 0.79
ABCD4-224ENST00000556119 DHX57Q6P158 1386 aaKnown RBP19.99■□□□□ 0.79
ABCD4-224ENST00000556119 ZC3H6P61129 1189 aaKnown RBP19.99■□□□□ 0.79
ABCD4-224ENST00000556119 SSH2Q76I76 1423 aa19.99■□□□□ 0.79
ABCD4-224ENST00000556119 PLSCR1O15162 318 aa19.98■□□□□ 0.79
ABCD4-224ENST00000556119 CFAP70Q5T0N1 1121 aa19.98■□□□□ 0.79
ABCD4-224ENST00000556119 ATF5Q9Y2D1 282 aaPredicted RBP19.98■□□□□ 0.79
ABCD4-224ENST00000556119 EVA1CP58658 441 aa19.97■□□□□ 0.79
ABCD4-224ENST00000556119 LARP1Q6PKG0 1096 aaKnown RBP19.97■□□□□ 0.79
ABCD4-224ENST00000556119 TCP11L2Q8N4U5 519 aa19.97■□□□□ 0.79
ABCD4-224ENST00000556119 FHDC1Q9C0D6 1143 aaPredicted RBP19.97■□□□□ 0.79
ABCD4-224ENST00000556119 PEAK1Q9H792 1746 aa19.96■□□□□ 0.79
ABCD4-224ENST00000556119 PARP4Q9UKK3 1724 aaKnown RBP19.96■□□□□ 0.79
ABCD4-224ENST00000556119 HIRIP3Q9BW71 556 aaPredicted RBP19.96■□□□□ 0.79
ABCD4-224ENST00000556119 POGKQ9P215 609 aa19.96■□□□□ 0.79
ABCD4-224ENST00000556119 NGDNQ8NEJ9 315 aaKnown RBP19.95■□□□□ 0.78
ABCD4-224ENST00000556119 PROM2Q8N271 834 aa19.94■□□□□ 0.78
ABCD4-224ENST00000556119 DLC1Q96QB1 1528 aa19.93■□□□□ 0.78
ABCD4-224ENST00000556119 C11orf95C9JLR9 678 aaPredicted RBP19.92■□□□□ 0.78
ABCD4-224ENST00000556119 PTF1AQ7RTS3 328 aa19.92■□□□□ 0.78
ABCD4-224ENST00000556119 TULP4Q9NRJ4 1543 aa19.92■□□□□ 0.78
ABCD4-224ENST00000556119 NUTM2GQ5VZR2 741 aa19.91■□□□□ 0.78
ABCD4-224ENST00000556119 PPARGC1BQ86YN6 1023 aaKnown RBP19.91■□□□□ 0.78
ABCD4-224ENST00000556119 BCL11BQ9C0K0 894 aaPredicted RBP19.91■□□□□ 0.78
ABCD4-224ENST00000556119 THRAP3Q9Y2W1 955 aaKnown RBP19.91■□□□□ 0.78
ABCD4-224ENST00000556119 LMO7Q8WWI1 1683 aa19.91■□□□□ 0.78
ABCD4-224ENST00000556119 GIGYF1O75420 1035 aaPredicted RBP19.9■□□□□ 0.78
ABCD4-224ENST00000556119 SGIP1Q9BQI5 828 aa19.9■□□□□ 0.78
ABCD4-224ENST00000556119 OVOS2A0A0G2JMS6 1433 aa19.89■□□□□ 0.77
ABCD4-224ENST00000556119 OVOS2A0A0J9YW53 1432 aa19.89■□□□□ 0.77
ABCD4-224ENST00000556119 OVOS2Q6IE36 1432 aa19.89■□□□□ 0.77
ABCD4-224ENST00000556119 MINK1Q8N4C8 1332 aaPredicted RBP19.89■□□□□ 0.77
ABCD4-224ENST00000556119 EIF3AQ14152 1382 aaKnown RBP19.88■□□□□ 0.77
ABCD4-224ENST00000556119 WASLO00401 505 aaPredicted RBP19.88■□□□□ 0.77
ABCD4-224ENST00000556119 MTFR1LQ9H019 292 aa19.86■□□□□ 0.77
ABCD4-224ENST00000556119 TRAK1Q9UPV9 953 aa19.85■□□□□ 0.77
ABCD4-224ENST00000556119 ATP7BP35670 1465 aa19.85■□□□□ 0.77
ABCD4-224ENST00000556119 ITSN1Q15811 1721 aa19.85■□□□□ 0.77
ABCD4-224ENST00000556119 SLC15A2Q16348 729 aa19.84■□□□□ 0.77
ABCD4-224ENST00000556119 LRRC37A3O60309 1634 aa19.84■□□□□ 0.77
ABCD4-224ENST00000556119 CPDO75976 1380 aa19.83■□□□□ 0.77
ABCD4-224ENST00000556119 STK32BQ9NY57 414 aa19.83■□□□□ 0.77
ABCD4-224ENST00000556119 ADGRB1O14514 1584 aa19.83■□□□□ 0.76
ABCD4-224ENST00000556119 ARXQ96QS3 562 aa19.82■□□□□ 0.76
ABCD4-224ENST00000556119 COL5A2P05997 1499 aaPredicted RBP19.81■□□□□ 0.76
ABCD4-224ENST00000556119 TXNRD1Q16881 649 aa19.81■□□□□ 0.76
ABCD4-224ENST00000556119 SHANK3Q9BYB0 1731 aa19.81■□□□□ 0.76
ABCD4-224ENST00000556119 MAP3K5Q99683 1374 aa19.81■□□□□ 0.76
ABCD4-224ENST00000556119 DDB1Q16531 1140 aa19.8■□□□□ 0.76
ABCD4-224ENST00000556119 GPR162Q16538 588 aa19.8■□□□□ 0.76
ABCD4-224ENST00000556119 NUDT16Q96DE0 195 aaKnown RBP19.8■□□□□ 0.76
ABCD4-224ENST00000556119 CRB1P82279 1406 aa19.79■□□□□ 0.76
ABCD4-224ENST00000556119 MARCH10Q8NA82 808 aaPredicted RBP19.78■□□□□ 0.76
ABCD4-224ENST00000556119 MPHOSPH9Q99550 1183 aa19.78■□□□□ 0.76
ABCD4-224ENST00000556119 AKAP12Q02952 1782 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms