RNA–Protein interactions for RNA: ENST00000555810.5

TUBB3-210, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-210ENST00000555810 NUP188Q5SRE5 1749 aa21.53■■□□□ 1.04
TUBB3-210ENST00000555810 RREB1Q92766 1687 aa21.53■■□□□ 1.04
TUBB3-210ENST00000555810 PARD3Q8TEW0 1356 aa21.51■■□□□ 1.03
TUBB3-210ENST00000555810 KCNQ2O43526 872 aa21.51■■□□□ 1.03
TUBB3-210ENST00000555810 PRDM11Q9NQV5 511 aa21.5■■□□□ 1.03
TUBB3-210ENST00000555810 STRN4Q9NRL3 753 aa21.5■■□□□ 1.03
TUBB3-210ENST00000555810 TRPM3Q9HCF6 1732 aaPredicted RBP21.49■■□□□ 1.03
TUBB3-210ENST00000555810 SENP3-EIF4A1A0A087X0R7 540 aa21.49■■□□□ 1.03
TUBB3-210ENST00000555810 USP35Q9P2H5 1018 aa21.49■■□□□ 1.03
TUBB3-210ENST00000555810 SPATA31A1Q5TZJ5 1347 aa21.48■■□□□ 1.03
TUBB3-210ENST00000555810 ANKRD30BQ9BXX2 1392 aa21.48■■□□□ 1.03
TUBB3-210ENST00000555810 NINLQ9Y2I6 1382 aa21.48■■□□□ 1.03
TUBB3-210ENST00000555810 ALS2Q96Q42 1657 aa21.47■■□□□ 1.03
TUBB3-210ENST00000555810 PDE3BQ13370 1112 aa21.47■■□□□ 1.03
TUBB3-210ENST00000555810 PAK3O75914 559 aaPredicted RBP21.46■■□□□ 1.03
TUBB3-210ENST00000555810 CHRNA2Q15822 529 aa21.46■■□□□ 1.03
TUBB3-210ENST00000555810 ZNF784Q8NCA9 323 aaPredicted RBP21.46■■□□□ 1.03
TUBB3-210ENST00000555810 SIRT1Q96EB6 747 aa21.46■■□□□ 1.03
TUBB3-210ENST00000555810 PRAM1Q96QH2 718 aa21.46■■□□□ 1.03
TUBB3-210ENST00000555810 PIK3C2GO75747 1445 aa21.46■■□□□ 1.03
TUBB3-210ENST00000555810 GPRASP1Q5JY77 1395 aa21.45■■□□□ 1.02
TUBB3-210ENST00000555810 SPATA31E1Q6ZUB1 1445 aa21.44■■□□□ 1.02
TUBB3-210ENST00000555810 POGKQ9P215 609 aa21.43■■□□□ 1.02
TUBB3-210ENST00000555810 CRYBG1Q9Y4K1 1723 aa21.42■■□□□ 1.02
TUBB3-210ENST00000555810 HIRIP3Q9BW71 556 aaPredicted RBP21.41■■□□□ 1.02
TUBB3-210ENST00000555810 DHX57Q6P158 1386 aaKnown RBP21.4■■□□□ 1.02
TUBB3-210ENST00000555810 KIAA0232Q92628 1395 aa21.4■■□□□ 1.02
TUBB3-210ENST00000555810 ACIN1Q9UKV3 1341 aaKnown RBP21.4■■□□□ 1.02
TUBB3-210ENST00000555810 CFAP70Q5T0N1 1121 aa21.4■■□□□ 1.02
TUBB3-210ENST00000555810 IFFO2Q5TF58 517 aa21.4■■□□□ 1.02
TUBB3-210ENST00000555810 ANKARQ7Z5J8 1434 aa21.39■■□□□ 1.02
TUBB3-210ENST00000555810 EVA1CP58658 441 aa21.39■■□□□ 1.01
TUBB3-210ENST00000555810 ZC3H6P61129 1189 aaKnown RBP21.39■■□□□ 1.01
TUBB3-210ENST00000555810 C14orf93Q9H972 538 aaKnown RBP21.39■■□□□ 1.01
TUBB3-210ENST00000555810 NGDNQ8NEJ9 315 aaKnown RBP21.38■■□□□ 1.01
TUBB3-210ENST00000555810 NRKQ7Z2Y5 1582 aa21.36■■□□□ 1.01
TUBB3-210ENST00000555810 C1QTNF8P60827 252 aa21.35■■□□□ 1.01
TUBB3-210ENST00000555810 NUTM2GQ5VZR2 741 aa21.35■■□□□ 1.01
TUBB3-210ENST00000555810 MINK1Q8N4C8 1332 aaPredicted RBP21.34■■□□□ 1.01
TUBB3-210ENST00000555810 PRR36Q9H6K5 1346 aa21.34■■□□□ 1.01
TUBB3-210ENST00000555810 UTRNP46939 3433 aa21.34■■□□□ 1.01
TUBB3-210ENST00000555810 BARGINQ6ZT62 677 aa21.34■■□□□ 1.01
TUBB3-210ENST00000555810 ZBTB7AO95365 584 aa21.33■■□□□ 1.01
TUBB3-210ENST00000555810 PDGFDQ9GZP0 370 aaPredicted RBP21.33■■□□□ 1.01
TUBB3-210ENST00000555810 DLC1Q96QB1 1528 aa21.33■■□□□ 1
TUBB3-210ENST00000555810 CHD4Q14839 1912 aa21.33■■□□□ 1
TUBB3-210ENST00000555810 LARP1Q6PKG0 1096 aaKnown RBP21.32■■□□□ 1
TUBB3-210ENST00000555810 PHRF1Q9P1Y6 1649 aaKnown RBP21.31■■□□□ 1
TUBB3-210ENST00000555810 ANO8Q9HCE9 1232 aaPredicted RBP21.31■■□□□ 1
TUBB3-210ENST00000555810 ATF5Q9Y2D1 282 aaPredicted RBP21.31■■□□□ 1
TUBB3-210ENST00000555810 MYOM1P52179 1685 aa21.31■■□□□ 1
TUBB3-210ENST00000555810 SSH2Q76I76 1423 aa21.3■■□□□ 1
TUBB3-210ENST00000555810 TCP11L2Q8N4U5 519 aa21.3■■□□□ 1
TUBB3-210ENST00000555810 TRAK1Q9UPV9 953 aa21.3■■□□□ 1
TUBB3-210ENST00000555810 CASZ1Q86V15 1759 aa21.3■■□□□ 1
TUBB3-210ENST00000555810 EIF3AQ14152 1382 aaKnown RBP21.27■■□□□ 1
TUBB3-210ENST00000555810 BCL11BQ9C0K0 894 aaPredicted RBP21.27■■□□□ 1
TUBB3-210ENST00000555810 TULP4Q9NRJ4 1543 aa21.27■■□□□ 1
TUBB3-210ENST00000555810 WASLO00401 505 aaPredicted RBP21.26■□□□□ 0.99
TUBB3-210ENST00000555810 SBF2Q86WG5 1849 aa21.25■□□□□ 0.99
TUBB3-210ENST00000555810 PTGER2P43116 358 aa21.25■□□□□ 0.99
TUBB3-210ENST00000555810 SYT17Q9BSW7 474 aa21.25■□□□□ 0.99
TUBB3-210ENST00000555810 FHDC1Q9C0D6 1143 aaPredicted RBP21.25■□□□□ 0.99
TUBB3-210ENST00000555810 PLSCR1O15162 318 aa21.23■□□□□ 0.99
TUBB3-210ENST00000555810 PTF1AQ7RTS3 328 aa21.23■□□□□ 0.99
TUBB3-210ENST00000555810 MPHOSPH9Q99550 1183 aa21.23■□□□□ 0.99
TUBB3-210ENST00000555810 PARP4Q9UKK3 1724 aaKnown RBP21.23■□□□□ 0.99
TUBB3-210ENST00000555810 RGPD3A6NKT7 1758 aaPredicted RBP21.21■□□□□ 0.99
TUBB3-210ENST00000555810 RGPD4Q7Z3J3 1758 aa21.21■□□□□ 0.99
TUBB3-210ENST00000555810 THRAP3Q9Y2W1 955 aaKnown RBP21.21■□□□□ 0.99
TUBB3-210ENST00000555810 ITSN1Q15811 1721 aa21.2■□□□□ 0.98
TUBB3-210ENST00000555810 OVOS2A0A0G2JMS6 1433 aa21.2■□□□□ 0.98
TUBB3-210ENST00000555810 OVOS2A0A0J9YW53 1432 aa21.2■□□□□ 0.98
TUBB3-210ENST00000555810 OVOS2Q6IE36 1432 aa21.2■□□□□ 0.98
TUBB3-210ENST00000555810 ADGRB1O14514 1584 aa21.19■□□□□ 0.98
TUBB3-210ENST00000555810 C11orf95C9JLR9 678 aaPredicted RBP21.19■□□□□ 0.98
TUBB3-210ENST00000555810 PROM2Q8N271 834 aa21.19■□□□□ 0.98
TUBB3-210ENST00000555810 NUDT16Q96DE0 195 aaKnown RBP21.19■□□□□ 0.98
TUBB3-210ENST00000555810 PEAK1Q9H792 1746 aa21.18■□□□□ 0.98
TUBB3-210ENST00000555810 ZBTB7CA1YPR0 619 aa21.18■□□□□ 0.98
TUBB3-210ENST00000555810 ATP7BP35670 1465 aa21.18■□□□□ 0.98
TUBB3-210ENST00000555810 STK32BQ9NY57 414 aa21.17■□□□□ 0.98
TUBB3-210ENST00000555810 LMO7Q8WWI1 1683 aa21.17■□□□□ 0.98
TUBB3-210ENST00000555810 GIGYF1O75420 1035 aaPredicted RBP21.16■□□□□ 0.98
TUBB3-210ENST00000555810 ABTB2Q8N961 1025 aa21.16■□□□□ 0.98
TUBB3-210ENST00000555810 DDB1Q16531 1140 aa21.15■□□□□ 0.98
TUBB3-210ENST00000555810 ACEP12821 1306 aa21.13■□□□□ 0.97
TUBB3-210ENST00000555810 SLC15A2Q16348 729 aa21.13■□□□□ 0.97
TUBB3-210ENST00000555810 LRRC37A3O60309 1634 aa21.12■□□□□ 0.97
TUBB3-210ENST00000555810 GPR162Q16538 588 aa21.12■□□□□ 0.97
TUBB3-210ENST00000555810 TXNRD1Q16881 649 aa21.12■□□□□ 0.97
TUBB3-210ENST00000555810 MTFR1LQ9H019 292 aa21.12■□□□□ 0.97
TUBB3-210ENST00000555810 COL5A2P05997 1499 aaPredicted RBP21.12■□□□□ 0.97
TUBB3-210ENST00000555810 CRB1P82279 1406 aa21.12■□□□□ 0.97
TUBB3-210ENST00000555810 CPDO75976 1380 aa21.11■□□□□ 0.97
TUBB3-210ENST00000555810 KDM2AQ9Y2K7 1162 aa21.11■□□□□ 0.97
TUBB3-210ENST00000555810 GCP02774 474 aa21.1■□□□□ 0.97
TUBB3-210ENST00000555810 ARXQ96QS3 562 aa21.1■□□□□ 0.97
TUBB3-210ENST00000555810 MARCH10Q8NA82 808 aaPredicted RBP21.09■□□□□ 0.97
TUBB3-210ENST00000555810 SGIP1Q9BQI5 828 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms