RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 DHX8Q14562 1220 aaKnown RBP10.2□□□□□ -0.78
LINC00641-201ENST00000555379 NUTM2FA1L443 756 aa10.2□□□□□ -0.78
LINC00641-201ENST00000555379 TSR1Q2NL82 804 aaKnown RBP10.2□□□□□ -0.78
LINC00641-201ENST00000555379 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.2□□□□□ -0.78
LINC00641-201ENST00000555379 UBTFL1P0CB47 393 aaPredicted RBP10.2□□□□□ -0.78
LINC00641-201ENST00000555379 INTS3Q68E01 1043 aaKnown RBP10.2□□□□□ -0.78
LINC00641-201ENST00000555379 CDK19Q9BWU1 502 aa10.2□□□□□ -0.78
LINC00641-201ENST00000555379 MSH6P52701 1360 aa10.2□□□□□ -0.78
LINC00641-201ENST00000555379 FANCIQ9NVI1 1328 aa10.2□□□□□ -0.78
LINC00641-201ENST00000555379 SYTL4Q96C24 671 aaPredicted RBP10.19□□□□□ -0.78
LINC00641-201ENST00000555379 TOM1O60784 492 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 MCM2P49736 904 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 A0A087WZG4 1122 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 H3BQV1 296 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 CABP4P57796 275 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 IFFO2Q5TF58 517 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 ARID3AQ99856 593 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 UHRF1BP1LA0JNW5 1464 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 TTC21AQ8NDW8 1320 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 FCHSD2O94868 740 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 STARD3NLO95772 234 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 TOM1L2Q6ZVM7 507 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 DRC7Q8IY82 874 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 IPO9Q96P70 1041 aaKnown RBP10.18□□□□□ -0.78
LINC00641-201ENST00000555379 SRCIN1Q9C0H9 1055 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 GSE1Q14687 1217 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 CDK13Q14004 1512 aaKnown RBP10.18□□□□□ -0.78
LINC00641-201ENST00000555379 KDM5BQ9UGL1 1544 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 EIF2AK4Q9P2K8 1649 aaKnown RBP10.18□□□□□ -0.78
LINC00641-201ENST00000555379 ASXL2Q76L83 1435 aa10.17□□□□□ -0.78
LINC00641-201ENST00000555379 A2MP01023 1474 aa10.17□□□□□ -0.78
LINC00641-201ENST00000555379 CPLX1O14810 134 aa10.17□□□□□ -0.78
LINC00641-201ENST00000555379 DHX16O60231 1041 aaKnown RBP10.17□□□□□ -0.78
LINC00641-201ENST00000555379 RALYLQ86SE5 291 aaKnown RBP10.17□□□□□ -0.78
LINC00641-201ENST00000555379 CLASRPQ8N2M8 674 aaKnown RBP10.17□□□□□ -0.78
LINC00641-201ENST00000555379 NCBP3Q53F19 620 aaKnown RBP10.17□□□□□ -0.78
LINC00641-201ENST00000555379 CFAP70Q5T0N1 1121 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 CCDC146Q8IYE0 955 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 CCDC43Q96MW1 224 aaKnown RBP10.16□□□□□ -0.78
LINC00641-201ENST00000555379 ZNF287Q9HBT7 754 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 KIF7Q2M1P5 1343 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 CNTROBQ8N137 903 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 GCC1Q96CN9 775 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 EIF2S2P20042 333 aaKnown RBP10.16□□□□□ -0.78
LINC00641-201ENST00000555379 ABCC2Q92887 1545 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 RRP1P56182 461 aaKnown RBP10.16□□□□□ -0.78
LINC00641-201ENST00000555379 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.16□□□□□ -0.78
LINC00641-201ENST00000555379 FAM161AQ3B820 660 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 NACAP1Q9BZK3 213 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 NEO1Q92859 1461 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 SCAF11Q99590 1463 aaKnown RBP10.15□□□□□ -0.78
LINC00641-201ENST00000555379 APBB1O00213 710 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 RAPGEF3O95398 923 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 PDE3AQ14432 1141 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 CCDC158Q5M9N0 1113 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 KIAA0556O60303 1618 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 ABCC5O15440 1437 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 SLF2Q8IX21 1173 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 PIP4K2AP48426 406 aaPredicted RBP10.15□□□□□ -0.79
LINC00641-201ENST00000555379 STK11IPQ8N1F8 1099 aa10.15□□□□□ -0.79
LINC00641-201ENST00000555379 FAM43AQ8N2R8 423 aa10.15□□□□□ -0.79
LINC00641-201ENST00000555379 TSPYL1Q9H0U9 437 aa10.15□□□□□ -0.79
LINC00641-201ENST00000555379 APAF1O14727 1248 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 NEFHP12036 1026 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 WWC2Q6AWC2 1192 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 VPS53Q5VIR6 699 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 ZNF530Q6P9A1 599 aaPredicted RBP10.14□□□□□ -0.79
LINC00641-201ENST00000555379 DNAI2Q9GZS0 605 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 NAIPQ13075 1403 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 PPP4R3BQ5MIZ7 849 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 CDCA7Q9BWT1 371 aaPredicted RBP10.14□□□□□ -0.79
LINC00641-201ENST00000555379 PHF8Q9UPP1 1060 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 PLCB2Q00722 1185 aa10.13□□□□□ -0.79
LINC00641-201ENST00000555379 CCDC70Q6NSX1 233 aa10.13□□□□□ -0.79
LINC00641-201ENST00000555379 TMOD2Q9NZR1 351 aa10.13□□□□□ -0.79
LINC00641-201ENST00000555379 TEX35Q5T0J7 233 aa10.13□□□□□ -0.79
LINC00641-201ENST00000555379 ANKRD45Q5TZF3 282 aa10.13□□□□□ -0.79
LINC00641-201ENST00000555379 NPHP3Q7Z494 1330 aa10.13□□□□□ -0.79
LINC00641-201ENST00000555379 TULP1O00294 542 aaPredicted RBP10.13□□□□□ -0.79
LINC00641-201ENST00000555379 TPD52L1Q16890 204 aaPredicted RBP10.13□□□□□ -0.79
LINC00641-201ENST00000555379 NUDT16Q96DE0 195 aaKnown RBP10.13□□□□□ -0.79
LINC00641-201ENST00000555379 PDCP20941 246 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 SOS1Q07889 1333 aaPredicted RBP10.12□□□□□ -0.79
LINC00641-201ENST00000555379 B4GALNT3Q6L9W6 998 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 NUCB2P80303 420 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 GGNBP2Q9H3C7 697 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 ANKRD36BQ8N2N9 1353 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 IPO7O95373 1038 aaKnown RBP10.12□□□□□ -0.79
LINC00641-201ENST00000555379 GNAI2P04899 355 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 ANKRD1Q15327 319 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 SMARCC1Q92922 1105 aaPredicted RBP10.12□□□□□ -0.79
LINC00641-201ENST00000555379 MTHFSP49914 203 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 R3HCC1Q9Y3T6 440 aaKnown RBP10.12□□□□□ -0.79
LINC00641-201ENST00000555379 TRPM2O94759 1503 aa10.11□□□□□ -0.79
LINC00641-201ENST00000555379 RDXP35241 583 aaKnown RBP10.11□□□□□ -0.79
LINC00641-201ENST00000555379 RILPL2Q969X0 211 aa10.11□□□□□ -0.79
LINC00641-201ENST00000555379 CTNNA3Q9UI47 895 aa10.11□□□□□ -0.79
LINC00641-201ENST00000555379 PPP2R1AP30153 589 aa10.11□□□□□ -0.79
LINC00641-201ENST00000555379 CWC15Q9P013 229 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms