RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 ANKARQ7Z5J8 1434 aa14.52□□□□□ -0.09
SCFD1-215ENST00000555259 SAFB2Q14151 953 aaKnown RBP eCLIP14.51□□□□□ -0.09
SCFD1-215ENST00000555259 FAM196AQ6ZSG2 479 aa14.51□□□□□ -0.09
SCFD1-215ENST00000555259 ALS2Q96Q42 1657 aa14.51□□□□□ -0.09
SCFD1-215ENST00000555259 APBA3O96018 575 aa14.51□□□□□ -0.09
SCFD1-215ENST00000555259 PRAM1Q96QH2 718 aa14.51□□□□□ -0.09
SCFD1-215ENST00000555259 C14orf93Q9H972 538 aaKnown RBP14.5□□□□□ -0.09
SCFD1-215ENST00000555259 SPATA31A1Q5TZJ5 1347 aa14.49□□□□□ -0.09
SCFD1-215ENST00000555259 GPRASP1Q5JY77 1395 aa14.49□□□□□ -0.09
SCFD1-215ENST00000555259 DHX57Q6P158 1386 aaKnown RBP14.49□□□□□ -0.09
SCFD1-215ENST00000555259 RREB1Q92766 1687 aa14.49□□□□□ -0.09
SCFD1-215ENST00000555259 PRDM11Q9NQV5 511 aa14.48□□□□□ -0.09
SCFD1-215ENST00000555259 NUP188Q5SRE5 1749 aa14.47□□□□□ -0.09
SCFD1-215ENST00000555259 CRYBG1Q9Y4K1 1723 aa14.47□□□□□ -0.09
SCFD1-215ENST00000555259 ACIN1Q9UKV3 1341 aaKnown RBP14.47□□□□□ -0.09
SCFD1-215ENST00000555259 NBPF8Q3BBV2 869 aa14.47□□□□□ -0.09
SCFD1-215ENST00000555259 CFAP70Q5T0N1 1121 aa14.47□□□□□ -0.09
SCFD1-215ENST00000555259 NBPF14Q5TI25 921 aa14.47□□□□□ -0.09
SCFD1-215ENST00000555259 PPP1R1BQ9UD71 204 aaPredicted RBP14.47□□□□□ -0.09
SCFD1-215ENST00000555259 DCAF8L1A6NGE4 600 aa14.46□□□□□ -0.09
SCFD1-215ENST00000555259 SPON1Q9HCB6 807 aa14.46□□□□□ -0.09
SCFD1-215ENST00000555259 NINLQ9Y2I6 1382 aa14.46□□□□□ -0.1
SCFD1-215ENST00000555259 POGKQ9P215 609 aa14.45□□□□□ -0.1
SCFD1-215ENST00000555259 DLC1Q96QB1 1528 aa14.44□□□□□ -0.1
SCFD1-215ENST00000555259 KIAA0232Q92628 1395 aa14.44□□□□□ -0.1
SCFD1-215ENST00000555259 PRR36Q9H6K5 1346 aa14.44□□□□□ -0.1
SCFD1-215ENST00000555259 KCNQ2O43526 872 aa14.44□□□□□ -0.1
SCFD1-215ENST00000555259 STRN4Q9NRL3 753 aa14.44□□□□□ -0.1
SCFD1-215ENST00000555259 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
SCFD1-215ENST00000555259 CHRNA2Q15822 529 aa14.43□□□□□ -0.1
SCFD1-215ENST00000555259 HIRIP3Q9BW71 556 aaPredicted RBP14.43□□□□□ -0.1
SCFD1-215ENST00000555259 PDE3BQ13370 1112 aa14.43□□□□□ -0.1
SCFD1-215ENST00000555259 USP35Q9P2H5 1018 aa14.43□□□□□ -0.1
SCFD1-215ENST00000555259 EIF3AQ14152 1382 aaKnown RBP14.42□□□□□ -0.1
SCFD1-215ENST00000555259 BARGINQ6ZT62 677 aa14.42□□□□□ -0.1
SCFD1-215ENST00000555259 TULP4Q9NRJ4 1543 aa14.42□□□□□ -0.1
SCFD1-215ENST00000555259 NGDNQ8NEJ9 315 aaKnown RBP14.41□□□□□ -0.1
SCFD1-215ENST00000555259 MPHOSPH9Q99550 1183 aa14.41□□□□□ -0.1
SCFD1-215ENST00000555259 CAMTA1Q9Y6Y1 1673 aa14.4□□□□□ -0.1
SCFD1-215ENST00000555259 MINK1Q8N4C8 1332 aaPredicted RBP14.4□□□□□ -0.1
SCFD1-215ENST00000555259 ZC3H6P61129 1189 aaKnown RBP14.39□□□□□ -0.11
SCFD1-215ENST00000555259 SSH2Q76I76 1423 aa14.39□□□□□ -0.11
SCFD1-215ENST00000555259 PHRF1Q9P1Y6 1649 aaKnown RBP14.39□□□□□ -0.11
SCFD1-215ENST00000555259 ADGRB1O14514 1584 aa14.38□□□□□ -0.11
SCFD1-215ENST00000555259 WASLO00401 505 aaPredicted RBP14.38□□□□□ -0.11
SCFD1-215ENST00000555259 EVA1CP58658 441 aa14.38□□□□□ -0.11
SCFD1-215ENST00000555259 ZNF784Q8NCA9 323 aaPredicted RBP14.38□□□□□ -0.11
SCFD1-215ENST00000555259 TRAK1Q9UPV9 953 aa14.38□□□□□ -0.11
SCFD1-215ENST00000555259 LARP1Q6PKG0 1096 aaKnown RBP14.37□□□□□ -0.11
SCFD1-215ENST00000555259 TCP11L2Q8N4U5 519 aa14.37□□□□□ -0.11
SCFD1-215ENST00000555259 ATP7BP35670 1465 aa14.36□□□□□ -0.11
SCFD1-215ENST00000555259 NUTM2GQ5VZR2 741 aa14.34□□□□□ -0.11
SCFD1-215ENST00000555259 NRKQ7Z2Y5 1582 aa14.34□□□□□ -0.11
SCFD1-215ENST00000555259 ANO8Q9HCE9 1232 aaPredicted RBP14.34□□□□□ -0.11
SCFD1-215ENST00000555259 THRAP3Q9Y2W1 955 aaKnown RBP14.34□□□□□ -0.11
SCFD1-215ENST00000555259 CASZ1Q86V15 1759 aa14.33□□□□□ -0.11
SCFD1-215ENST00000555259 C11orf95C9JLR9 678 aaPredicted RBP14.33□□□□□ -0.12
SCFD1-215ENST00000555259 RGPD3A6NKT7 1758 aaPredicted RBP14.32□□□□□ -0.12
SCFD1-215ENST00000555259 RGPD4Q7Z3J3 1758 aa14.32□□□□□ -0.12
SCFD1-215ENST00000555259 LMO7Q8WWI1 1683 aa14.32□□□□□ -0.12
SCFD1-215ENST00000555259 SENP3-EIF4A1A0A087X0R7 540 aa14.32□□□□□ -0.12
SCFD1-215ENST00000555259 PLSCR1O15162 318 aa14.32□□□□□ -0.12
SCFD1-215ENST00000555259 NUDT16Q96DE0 195 aaKnown RBP14.32□□□□□ -0.12
SCFD1-215ENST00000555259 PDGFDQ9GZP0 370 aaPredicted RBP14.32□□□□□ -0.12
SCFD1-215ENST00000555259 ITSN1Q15811 1721 aa14.32□□□□□ -0.12
SCFD1-215ENST00000555259 PARP4Q9UKK3 1724 aaKnown RBP14.32□□□□□ -0.12
SCFD1-215ENST00000555259 CPDO75976 1380 aa14.31□□□□□ -0.12
SCFD1-215ENST00000555259 OVOS2A0A0G2JMS6 1433 aa14.31□□□□□ -0.12
SCFD1-215ENST00000555259 OVOS2A0A0J9YW53 1432 aa14.31□□□□□ -0.12
SCFD1-215ENST00000555259 OVOS2Q6IE36 1432 aa14.31□□□□□ -0.12
SCFD1-215ENST00000555259 PEAK1Q9H792 1746 aa14.31□□□□□ -0.12
SCFD1-215ENST00000555259 ZBTB7AO95365 584 aa14.3□□□□□ -0.12
SCFD1-215ENST00000555259 MYOM1P52179 1685 aa14.3□□□□□ -0.12
SCFD1-215ENST00000555259 PTGER2P43116 358 aa14.3□□□□□ -0.12
SCFD1-215ENST00000555259 GOLGB1Q14789 3259 aaKnown RBP14.3□□□□□ -0.12
SCFD1-215ENST00000555259 POLR3AO14802 1390 aaPredicted RBP14.29□□□□□ -0.12
SCFD1-215ENST00000555259 COL5A2P05997 1499 aaPredicted RBP14.29□□□□□ -0.12
SCFD1-215ENST00000555259 C1QTNF8P60827 252 aa14.29□□□□□ -0.12
SCFD1-215ENST00000555259 CEP350Q5VT06 3117 aa14.28□□□□□ -0.12
SCFD1-215ENST00000555259 ABTB2Q8N961 1025 aa14.28□□□□□ -0.12
SCFD1-215ENST00000555259 USP19O94966 1318 aa14.28□□□□□ -0.12
SCFD1-215ENST00000555259 ACEP12821 1306 aa14.28□□□□□ -0.12
SCFD1-215ENST00000555259 PTF1AQ7RTS3 328 aa14.27□□□□□ -0.12
SCFD1-215ENST00000555259 PROM2Q8N271 834 aa14.27□□□□□ -0.12
SCFD1-215ENST00000555259 SYT17Q9BSW7 474 aa14.27□□□□□ -0.12
SCFD1-215ENST00000555259 BCL11BQ9C0K0 894 aaPredicted RBP14.27□□□□□ -0.12
SCFD1-215ENST00000555259 SBF2Q86WG5 1849 aa14.27□□□□□ -0.13
SCFD1-215ENST00000555259 CRB1P82279 1406 aa14.27□□□□□ -0.13
SCFD1-215ENST00000555259 IFFO2Q5TF58 517 aa14.26□□□□□ -0.13
SCFD1-215ENST00000555259 FHDC1Q9C0D6 1143 aaPredicted RBP14.26□□□□□ -0.13
SCFD1-215ENST00000555259 ATF5Q9Y2D1 282 aaPredicted RBP14.26□□□□□ -0.13
SCFD1-215ENST00000555259 LRRC37A3O60309 1634 aa14.26□□□□□ -0.13
SCFD1-215ENST00000555259 GCP02774 474 aa14.26□□□□□ -0.13
SCFD1-215ENST00000555259 DDB1Q16531 1140 aa14.25□□□□□ -0.13
SCFD1-215ENST00000555259 CDK19Q9BWU1 502 aa14.25□□□□□ -0.13
SCFD1-215ENST00000555259 CCDC61Q9Y6R9 512 aa14.25□□□□□ -0.13
SCFD1-215ENST00000555259 TOPAZ1Q8N9V7 1692 aa14.25□□□□□ -0.13
SCFD1-215ENST00000555259 ARHGEF28Q8N1W1 1705 aaKnown RBP14.25□□□□□ -0.13
SCFD1-215ENST00000555259 CHD4Q14839 1912 aa14.24□□□□□ -0.13
SCFD1-215ENST00000555259 PLEKHG3A1L390 1219 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms