RNA–Protein interactions for RNA: ENST00000554996.5

CCDC85C-203, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-203ENST00000554996 CDK19Q9BWU1 502 aa14.79□□□□□ -0.04
CCDC85C-203ENST00000554996 USP21Q9UK80 565 aa14.79□□□□□ -0.04
CCDC85C-203ENST00000554996 AKAP12Q02952 1782 aa14.78□□□□□ -0.04
CCDC85C-203ENST00000554996 NRKQ7Z2Y5 1582 aa14.78□□□□□ -0.04
CCDC85C-203ENST00000554996 CENPJQ9HC77 1338 aaPredicted RBP14.78□□□□□ -0.04
CCDC85C-203ENST00000554996 NUDT16Q96DE0 195 aaKnown RBP14.78□□□□□ -0.04
CCDC85C-203ENST00000554996 QTRT2Q9H974 415 aaKnown RBP14.78□□□□□ -0.04
CCDC85C-203ENST00000554996 COL14A1Q05707 1796 aaKnown RBP14.78□□□□□ -0.04
CCDC85C-203ENST00000554996 POLR3AO14802 1390 aaPredicted RBP14.77□□□□□ -0.04
CCDC85C-203ENST00000554996 ARHGEF10O15013 1369 aa14.77□□□□□ -0.04
CCDC85C-203ENST00000554996 PSME1Q06323 249 aa14.76□□□□□ -0.05
CCDC85C-203ENST00000554996 PIK3C2AO00443 1686 aa14.76□□□□□ -0.05
CCDC85C-203ENST00000554996 RBM6P78332 1123 aaKnown RBP14.75□□□□□ -0.05
CCDC85C-203ENST00000554996 TESK2Q96S53 571 aa14.75□□□□□ -0.05
CCDC85C-203ENST00000554996 PPIP5K1Q6PFW1 1433 aa14.75□□□□□ -0.05
CCDC85C-203ENST00000554996 ST20-MTHFSA0A0A6YYL1 179 aa14.74□□□□□ -0.05
CCDC85C-203ENST00000554996 LMOD2Q6P5Q4 547 aa14.74□□□□□ -0.05
CCDC85C-203ENST00000554996 NGDNQ8NEJ9 315 aaKnown RBP14.73□□□□□ -0.05
CCDC85C-203ENST00000554996 UPF1Q92900 1129 aaKnown RBP eCLIP14.73□□□□□ -0.053e-7■□□□□ 10.5
CCDC85C-203ENST00000554996 CABP2Q9NPB3 220 aa14.73□□□□□ -0.05
CCDC85C-203ENST00000554996 TRPC5Q9UL62 973 aaPredicted RBP14.73□□□□□ -0.05
CCDC85C-203ENST00000554996 MON2Q7Z3U7 1717 aa14.72□□□□□ -0.05
CCDC85C-203ENST00000554996 ACEP12821 1306 aa14.72□□□□□ -0.05
CCDC85C-203ENST00000554996 LMO7Q8WWI1 1683 aa14.72□□□□□ -0.05
CCDC85C-203ENST00000554996 EIF4G2P78344 907 aaKnown RBP eCLIP14.72□□□□□ -0.05
CCDC85C-203ENST00000554996 HSPA5P11021 654 aaKnown RBP14.71□□□□□ -0.05
CCDC85C-203ENST00000554996 PLEKHG3A1L390 1219 aa14.7□□□□□ -0.06
CCDC85C-203ENST00000554996 UNC5CLQ8IV45 518 aa14.7□□□□□ -0.06
CCDC85C-203ENST00000554996 FAM83GA6ND36 823 aa14.69□□□□□ -0.06
CCDC85C-203ENST00000554996 SRPK2P78362 688 aaKnown RBP14.69□□□□□ -0.06
CCDC85C-203ENST00000554996 NUTM2GQ5VZR2 741 aa14.69□□□□□ -0.06
CCDC85C-203ENST00000554996 CCDC61Q9Y6R9 512 aa14.69□□□□□ -0.06
CCDC85C-203ENST00000554996 THSD7AQ9UPZ6 1657 aa14.68□□□□□ -0.06
CCDC85C-203ENST00000554996 USP6P35125 1406 aa14.68□□□□□ -0.06
CCDC85C-203ENST00000554996 SSH2Q76I76 1423 aa14.68□□□□□ -0.06
CCDC85C-203ENST00000554996 PAK3O75914 559 aaPredicted RBP14.68□□□□□ -0.06
CCDC85C-203ENST00000554996 HAP1P54257 671 aaPredicted RBP14.68□□□□□ -0.06
CCDC85C-203ENST00000554996 GJD4Q96KN9 370 aaPredicted RBP14.68□□□□□ -0.06
CCDC85C-203ENST00000554996 SLIT3O75094 1523 aa14.67□□□□□ -0.06
CCDC85C-203ENST00000554996 CD163L1Q9NR16 1453 aa14.66□□□□□ -0.06
CCDC85C-203ENST00000554996 KIAA0232Q92628 1395 aa14.66□□□□□ -0.06
CCDC85C-203ENST00000554996 USP19O94966 1318 aa14.66□□□□□ -0.06
CCDC85C-203ENST00000554996 EVC2Q86UK5 1308 aa14.66□□□□□ -0.06
CCDC85C-203ENST00000554996 COL18A1P39060 1754 aa14.65□□□□□ -0.06
CCDC85C-203ENST00000554996 RGPD5Q99666 1765 aa14.65□□□□□ -0.06
CCDC85C-203ENST00000554996 USP54Q70EL1 1684 aa14.65□□□□□ -0.06
CCDC85C-203ENST00000554996 SLC24A1O60721 1099 aa14.65□□□□□ -0.06
CCDC85C-203ENST00000554996 CAMTA1Q9Y6Y1 1673 aa14.65□□□□□ -0.06
CCDC85C-203ENST00000554996 VPS72Q15906 364 aa14.64□□□□□ -0.07
CCDC85C-203ENST00000554996 PUS7Q96PZ0 661 aaKnown RBP14.64□□□□□ -0.07
CCDC85C-203ENST00000554996 CABP1Q9NZU7 370 aa14.64□□□□□ -0.07
CCDC85C-203ENST00000554996 WNK3Q9BYP7 1800 aa14.64□□□□□ -0.07
CCDC85C-203ENST00000554996 BTG4Q9NY30 223 aa14.63□□□□□ -0.07
CCDC85C-203ENST00000554996 ATAD2Q6PL18 1390 aa14.62□□□□□ -0.07
CCDC85C-203ENST00000554996 MYOM1P52179 1685 aa14.62□□□□□ -0.07
CCDC85C-203ENST00000554996 TMF1P82094 1093 aa14.62□□□□□ -0.07
CCDC85C-203ENST00000554996 CPSF1Q10570 1443 aaKnown RBP14.62□□□□□ -0.07
CCDC85C-203ENST00000554996 CHRNA2Q15822 529 aa14.62□□□□□ -0.07
CCDC85C-203ENST00000554996 SRCAPQ6ZRS2 3230 aa14.62□□□□□ -0.07
CCDC85C-203ENST00000554996 C11orf95C9JLR9 678 aaPredicted RBP14.61□□□□□ -0.07
CCDC85C-203ENST00000554996 NFAT5O94916 1531 aa14.61□□□□□ -0.07
CCDC85C-203ENST00000554996 ZC3H6P61129 1189 aaKnown RBP14.6□□□□□ -0.07
CCDC85C-203ENST00000554996 ABTB2Q8N961 1025 aa14.6□□□□□ -0.07
CCDC85C-203ENST00000554996 TNS1Q9HBL0 1735 aaKnown RBP14.6□□□□□ -0.07
CCDC85C-203ENST00000554996 PRDM11Q9NQV5 511 aa14.59□□□□□ -0.07
CCDC85C-203ENST00000554996 LTN1O94822 1766 aa14.59□□□□□ -0.07
CCDC85C-203ENST00000554996 CPDO75976 1380 aa14.59□□□□□ -0.07
CCDC85C-203ENST00000554996 COL5A2P05997 1499 aaPredicted RBP14.58□□□□□ -0.08
CCDC85C-203ENST00000554996 SEPT12Q8IYM1 358 aa14.58□□□□□ -0.08
CCDC85C-203ENST00000554996 KIF7Q2M1P5 1343 aa14.58□□□□□ -0.08
CCDC85C-203ENST00000554996 SPATA31A5Q5VU36 1347 aa14.58□□□□□ -0.08
CCDC85C-203ENST00000554996 SPATA31A7Q8IWB4 1347 aa14.58□□□□□ -0.08
CCDC85C-203ENST00000554996 NINLQ9Y2I6 1382 aa14.58□□□□□ -0.08
CCDC85C-203ENST00000554996 CDCA8Q53HL2 280 aa14.57□□□□□ -0.08
CCDC85C-203ENST00000554996 CCDC9Q9Y3X0 531 aaKnown RBP14.57□□□□□ -0.08
CCDC85C-203ENST00000554996 WASHC2AQ641Q2 1341 aa14.57□□□□□ -0.08
CCDC85C-203ENST00000554996 PARP4Q9UKK3 1724 aaKnown RBP14.56□□□□□ -0.08
CCDC85C-203ENST00000554996 ONECUT3O60422 494 aaPredicted RBP14.56□□□□□ -0.08
CCDC85C-203ENST00000554996 FAM98CQ17RN3 349 aaKnown RBP14.56□□□□□ -0.08
CCDC85C-203ENST00000554996 TTC21BQ7Z4L5 1316 aa14.56□□□□□ -0.08
CCDC85C-203ENST00000554996 BRD4O60885 1362 aaPredicted RBP14.56□□□□□ -0.08
CCDC85C-203ENST00000554996 CCDC7Q96M83 1385 aa14.56□□□□□ -0.08
CCDC85C-203ENST00000554996 LRRC37A3O60309 1634 aa14.55□□□□□ -0.08
CCDC85C-203ENST00000554996 SPATA31A1Q5TZJ5 1347 aa14.55□□□□□ -0.08
CCDC85C-203ENST00000554996 A0A1W2PP64 1363 aa14.55□□□□□ -0.08
CCDC85C-203ENST00000554996 RGPD1P0DJD0 1748 aa14.55□□□□□ -0.08
CCDC85C-203ENST00000554996 GCP02774 474 aa14.54□□□□□ -0.08
CCDC85C-203ENST00000554996 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
CCDC85C-203ENST00000554996 KTN1Q86UP2 1357 aaKnown RBP14.54□□□□□ -0.08
CCDC85C-203ENST00000554996 STRN4Q9NRL3 753 aa14.53□□□□□ -0.08
CCDC85C-203ENST00000554996 NLRP6P59044 892 aa14.52□□□□□ -0.09
CCDC85C-203ENST00000554996 FAM182BQ5T319 152 aa14.52□□□□□ -0.09
CCDC85C-203ENST00000554996 LARP1Q6PKG0 1096 aaKnown RBP14.52□□□□□ -0.09
CCDC85C-203ENST00000554996 NLRP13Q86W25 1043 aa14.52□□□□□ -0.09
CCDC85C-203ENST00000554996 PEAK1Q9H792 1746 aa14.52□□□□□ -0.09
CCDC85C-203ENST00000554996 BLMP54132 1417 aaPredicted RBP14.51□□□□□ -0.09
CCDC85C-203ENST00000554996 SLC12A5Q9H2X9 1139 aa14.51□□□□□ -0.09
CCDC85C-203ENST00000554996 OVOS2A0A0J9YW53 1432 aa14.5□□□□□ -0.09
CCDC85C-203ENST00000554996 OVOS2Q6IE36 1432 aa14.5□□□□□ -0.09
CCDC85C-203ENST00000554996 KIF20BQ96Q89 1820 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms