RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 GPBP1L1Q9HC44 474 aaPredicted RBP9.59□□□□□ -0.87
TGFB3-202ENST00000554980 NUP155O75694 1391 aa9.59□□□□□ -0.87
TGFB3-202ENST00000554980 RGL2O15211 777 aa9.59□□□□□ -0.87
TGFB3-202ENST00000554980 PSEN1P49768 467 aa9.59□□□□□ -0.87
TGFB3-202ENST00000554980 NBPF20Q3BBV1 942 aa9.59□□□□□ -0.87
TGFB3-202ENST00000554980 NPHP4O75161 1426 aaPredicted RBP9.59□□□□□ -0.87
TGFB3-202ENST00000554980 UNCXA6NJT0 531 aa9.58□□□□□ -0.88
TGFB3-202ENST00000554980 CALD1Q05682 793 aaKnown RBP9.58□□□□□ -0.88
TGFB3-202ENST00000554980 RALBP1Q15311 655 aa9.58□□□□□ -0.88
TGFB3-202ENST00000554980 CCDC96Q2M329 555 aa9.58□□□□□ -0.88
TGFB3-202ENST00000554980 TXNDC2Q86VQ3 553 aa9.58□□□□□ -0.88
TGFB3-202ENST00000554980 RETREG2Q8NC44 543 aa9.58□□□□□ -0.88
TGFB3-202ENST00000554980 EVI5LQ96CN4 794 aa9.58□□□□□ -0.88
TGFB3-202ENST00000554980 SUPT16HQ9Y5B9 1047 aaKnown RBP9.58□□□□□ -0.88
TGFB3-202ENST00000554980 E9PCH4 1651 aa9.58□□□□□ -0.88
TGFB3-202ENST00000554980 NAIPQ13075 1403 aa9.58□□□□□ -0.88
TGFB3-202ENST00000554980 MED14O60244 1454 aa9.58□□□□□ -0.88
TGFB3-202ENST00000554980 STRCP1A6NGW2 1772 aa9.58□□□□□ -0.88
TGFB3-202ENST00000554980 RBM26Q5T8P6 1007 aaKnown RBP9.57□□□□□ -0.88
TGFB3-202ENST00000554980 NUTM2DQ5VT03 806 aaPredicted RBP9.57□□□□□ -0.88
TGFB3-202ENST00000554980 RPS6KL1Q9Y6S9 549 aa9.57□□□□□ -0.88
TGFB3-202ENST00000554980 TET3O43151 1660 aa9.57□□□□□ -0.88
TGFB3-202ENST00000554980 ARHGAP23Q9P227 1491 aa9.57□□□□□ -0.88
TGFB3-202ENST00000554980 MYCNP04198 464 aaPredicted RBP9.57□□□□□ -0.88
TGFB3-202ENST00000554980 SIRT1Q96EB6 747 aa9.57□□□□□ -0.88
TGFB3-202ENST00000554980 TMEM2Q9UHN6 1383 aa9.57□□□□□ -0.88
TGFB3-202ENST00000554980 MYO5BQ9ULV0 1848 aa9.56□□□□□ -0.88
TGFB3-202ENST00000554980 ECM2O94769 699 aaPredicted RBP9.56□□□□□ -0.88
TGFB3-202ENST00000554980 APPP05067 770 aa9.56□□□□□ -0.88
TGFB3-202ENST00000554980 IRX3P78415 501 aaPredicted RBP9.56□□□□□ -0.88
TGFB3-202ENST00000554980 STAG3Q9UJ98 1225 aa9.56□□□□□ -0.88
TGFB3-202ENST00000554980 IQGAP1P46940 1657 aa9.56□□□□□ -0.88
TGFB3-202ENST00000554980 SLIT1O75093 1534 aa9.56□□□□□ -0.88
TGFB3-202ENST00000554980 SCAF11Q99590 1463 aaKnown RBP9.56□□□□□ -0.88
TGFB3-202ENST00000554980 IQGAP3Q86VI3 1631 aa9.56□□□□□ -0.88
TGFB3-202ENST00000554980 SLC26A8Q96RN1 970 aa9.55□□□□□ -0.88
TGFB3-202ENST00000554980 RIOK3O14730 519 aaKnown RBP9.55□□□□□ -0.88
TGFB3-202ENST00000554980 RBM33Q96EV2 1170 aaKnown RBP9.55□□□□□ -0.88
TGFB3-202ENST00000554980 CASC1Q6TDU7 716 aa9.54□□□□□ -0.88
TGFB3-202ENST00000554980 BARGINQ6ZT62 677 aa9.54□□□□□ -0.88
TGFB3-202ENST00000554980 GCC2Q8IWJ2 1684 aa9.54□□□□□ -0.88
TGFB3-202ENST00000554980 CEP120Q8N960 986 aa9.54□□□□□ -0.88
TGFB3-202ENST00000554980 MTA3Q9BTC8 594 aa9.54□□□□□ -0.88
TGFB3-202ENST00000554980 CHGAP10645 457 aaKnown RBP9.54□□□□□ -0.88
TGFB3-202ENST00000554980 FOXD4Q12950 439 aaPredicted RBP9.54□□□□□ -0.88
TGFB3-202ENST00000554980 ZC3H15Q8WU90 426 aaKnown RBP9.54□□□□□ -0.88
TGFB3-202ENST00000554980 ANP32BQ92688 251 aaKnown RBP9.54□□□□□ -0.88
TGFB3-202ENST00000554980 AMOTL2Q9Y2J4 779 aa9.54□□□□□ -0.88
TGFB3-202ENST00000554980 RPRD2Q5VT52 1461 aaKnown RBP9.54□□□□□ -0.88
TGFB3-202ENST00000554980 EGFL6Q8IUX8 553 aa9.54□□□□□ -0.88
TGFB3-202ENST00000554980 UBAP1LF5GYI3 381 aa9.53□□□□□ -0.88
TGFB3-202ENST00000554980 MICAL1Q8TDZ2 1067 aa9.53□□□□□ -0.88
TGFB3-202ENST00000554980 ADGRB3O60242 1522 aa9.53□□□□□ -0.88
TGFB3-202ENST00000554980 TMEM131LA2VDJ0 1609 aa9.53□□□□□ -0.88
TGFB3-202ENST00000554980 SDR16C5Q8N3Y7 309 aa9.53□□□□□ -0.88
TGFB3-202ENST00000554980 CARD10Q9BWT7 1032 aa9.53□□□□□ -0.88
TGFB3-202ENST00000554980 TMEM51Q9NW97 253 aa9.52□□□□□ -0.89
TGFB3-202ENST00000554980 HFM1A2PYH4 1435 aa9.52□□□□□ -0.89
TGFB3-202ENST00000554980 ANKRD62A6NC57 917 aa9.52□□□□□ -0.89
TGFB3-202ENST00000554980 CCER2I3L3R5 266 aa9.52□□□□□ -0.89
TGFB3-202ENST00000554980 ERCC3P19447 782 aa9.52□□□□□ -0.89
TGFB3-202ENST00000554980 CCER1Q8TC90 406 aaPredicted RBP9.52□□□□□ -0.89
TGFB3-202ENST00000554980 TRIM52Q96A61 297 aa9.52□□□□□ -0.89
TGFB3-202ENST00000554980 EID1Q9Y6B2 187 aa9.52□□□□□ -0.89
TGFB3-202ENST00000554980 ZFYVE9O95405 1425 aa9.52□□□□□ -0.89
TGFB3-202ENST00000554980 ALKQ9UM73 1620 aa9.52□□□□□ -0.89
TGFB3-202ENST00000554980 PPFIA4O75335 1185 aa9.51□□□□□ -0.89
TGFB3-202ENST00000554980 PIP4K2BP78356 416 aa9.51□□□□□ -0.89
TGFB3-202ENST00000554980 TRIM44Q96DX7 344 aaPredicted RBP9.51□□□□□ -0.89
TGFB3-202ENST00000554980 MSH5O43196 834 aa9.5□□□□□ -0.89
TGFB3-202ENST00000554980 HSP90AA2PQ14568 343 aaPredicted RBP9.5□□□□□ -0.89
TGFB3-202ENST00000554980 LRRC7Q96NW7 1537 aa9.5□□□□□ -0.89
TGFB3-202ENST00000554980 KDM5AP29375 1690 aaKnown RBP9.5□□□□□ -0.89
TGFB3-202ENST00000554980 SEMA3FQ13275 785 aa9.5□□□□□ -0.89
TGFB3-202ENST00000554980 RIMS2Q9UQ26 1411 aa9.49□□□□□ -0.89
TGFB3-202ENST00000554980 WDR70Q9NW82 654 aa9.49□□□□□ -0.89
TGFB3-202ENST00000554980 HIRIP3Q9BW71 556 aaPredicted RBP9.49□□□□□ -0.89
TGFB3-202ENST00000554980 IQSEC2Q5JU85 1478 aa9.48□□□□□ -0.89
TGFB3-202ENST00000554980 XIRP1Q702N8 1843 aaKnown RBP9.48□□□□□ -0.89
TGFB3-202ENST00000554980 CPS1P31327 1500 aa9.48□□□□□ -0.89
TGFB3-202ENST00000554980 RGS3P49796 1198 aa9.48□□□□□ -0.89
TGFB3-202ENST00000554980 KRBA2Q6ZNG9 492 aa9.48□□□□□ -0.89
TGFB3-202ENST00000554980 ARMCX6Q7L4S7 300 aa9.48□□□□□ -0.89
TGFB3-202ENST00000554980 SPHKAPQ2M3C7 1700 aa9.48□□□□□ -0.89
TGFB3-202ENST00000554980 IRF6O14896 467 aa9.47□□□□□ -0.89
TGFB3-202ENST00000554980 CLTCL1P53675 1640 aa9.47□□□□□ -0.89
TGFB3-202ENST00000554980 LONRF3Q496Y0 759 aa9.47□□□□□ -0.89
TGFB3-202ENST00000554980 OTUD6BQ8N6M0 293 aa9.47□□□□□ -0.89
TGFB3-202ENST00000554980 PEX14O75381 377 aa9.47□□□□□ -0.89
TGFB3-202ENST00000554980 SSFA2P28290 1259 aa9.47□□□□□ -0.89
TGFB3-202ENST00000554980 CLUAP1Q96AJ1 413 aa9.47□□□□□ -0.89
TGFB3-202ENST00000554980 TSPAN18Q96SJ8 248 aa9.47□□□□□ -0.89
TGFB3-202ENST00000554980 PPP1R15AO75807 674 aaPredicted RBP9.46□□□□□ -0.89
TGFB3-202ENST00000554980 POLD1P28340 1107 aa9.46□□□□□ -0.89
TGFB3-202ENST00000554980 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.46□□□□□ -0.89
TGFB3-202ENST00000554980 ADAMTS13Q76LX8 1427 aa9.46□□□□□ -0.9
TGFB3-202ENST00000554980 TRAK2O60296 914 aa9.46□□□□□ -0.9
TGFB3-202ENST00000554980 HSPA1LP34931 641 aa9.46□□□□□ -0.9
TGFB3-202ENST00000554980 ZNF662Q6ZS27 426 aa9.46□□□□□ -0.9
TGFB3-202ENST00000554980 STK24Q9Y6E0 443 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms