RNA–Protein interactions for RNA: ENST00000552942.5

CCDC65-205, Transcript of coiled-coil domain containing 65, humanhuman

TSL 5

Gene CCDC65, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-205ENST00000552942 SETBP1Q9Y6X0 1596 aa10.65□□□□□ -0.7
CCDC65-205ENST00000552942 PLEKHG1Q9ULL1 1385 aa10.64□□□□□ -0.71
CCDC65-205ENST00000552942 NUP155O75694 1391 aa10.64□□□□□ -0.71
CCDC65-205ENST00000552942 DIP2AQ14689 1571 aa10.63□□□□□ -0.71
CCDC65-205ENST00000552942 VARS2Q5ST30 1063 aaKnown RBP10.63□□□□□ -0.71
CCDC65-205ENST00000552942 PTPRUQ92729 1446 aa10.63□□□□□ -0.71
CCDC65-205ENST00000552942 SLC52A1Q9NWF4 448 aa10.63□□□□□ -0.71
CCDC65-205ENST00000552942 POTEB3A0JP26 581 aa10.62□□□□□ -0.71
CCDC65-205ENST00000552942 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
CCDC65-205ENST00000552942 HSPA1LP34931 641 aa10.62□□□□□ -0.71
CCDC65-205ENST00000552942 POTEBQ6S5H4 581 aa10.62□□□□□ -0.71
CCDC65-205ENST00000552942 ROBO1Q9Y6N7 1651 aa10.62□□□□□ -0.71
CCDC65-205ENST00000552942 TMEM94Q12767 1356 aa10.62□□□□□ -0.71
CCDC65-205ENST00000552942 ITGAEP38570 1179 aa10.61□□□□□ -0.71
CCDC65-205ENST00000552942 SLC34A2O95436 690 aa10.6□□□□□ -0.71
CCDC65-205ENST00000552942 SLC26A8Q96RN1 970 aa10.6□□□□□ -0.71
CCDC65-205ENST00000552942 IFT172Q9UG01 1749 aa10.6□□□□□ -0.71
CCDC65-205ENST00000552942 GPHNQ9NQX3 736 aaPredicted RBP10.59□□□□□ -0.71
CCDC65-205ENST00000552942 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.71
CCDC65-205ENST00000552942 RBM33Q96EV2 1170 aaKnown RBP10.58□□□□□ -0.71
CCDC65-205ENST00000552942 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.58□□□□□ -0.72
CCDC65-205ENST00000552942 PPLO60437 1756 aa10.58□□□□□ -0.72
CCDC65-205ENST00000552942 COL16A1Q07092 1604 aaPredicted RBP10.58□□□□□ -0.72
CCDC65-205ENST00000552942 NALCNQ8IZF0 1738 aa10.58□□□□□ -0.72
CCDC65-205ENST00000552942 FOXK1P85037 733 aa10.58□□□□□ -0.72
CCDC65-205ENST00000552942 PCDHGA4Q9Y5G9 962 aa10.58□□□□□ -0.72
CCDC65-205ENST00000552942 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
CCDC65-205ENST00000552942 KCNA6P17658 529 aa10.57□□□□□ -0.72
CCDC65-205ENST00000552942 PIP4K2BP78356 416 aa10.57□□□□□ -0.72
CCDC65-205ENST00000552942 SPNS2Q8IVW8 549 aa10.57□□□□□ -0.72
CCDC65-205ENST00000552942 KHSRPQ92945 711 aaKnown RBP eCLIP10.57□□□□□ -0.72
CCDC65-205ENST00000552942 DISP3Q9P2K9 1392 aa10.56□□□□□ -0.72
CCDC65-205ENST00000552942 ASXL1Q8IXJ9 1541 aa10.56□□□□□ -0.72
CCDC65-205ENST00000552942 NUDT7P0C024 238 aa10.56□□□□□ -0.72
CCDC65-205ENST00000552942 NUTM2DQ5VT03 806 aaPredicted RBP10.56□□□□□ -0.72
CCDC65-205ENST00000552942 PLPP6Q8IY26 295 aa10.56□□□□□ -0.72
CCDC65-205ENST00000552942 ZNF687Q8N1G0 1237 aa10.56□□□□□ -0.72
CCDC65-205ENST00000552942 KRTAP3-3Q9BYR6 98 aa10.56□□□□□ -0.72
CCDC65-205ENST00000552942 KRTAP3-2Q9BYR7 98 aa10.56□□□□□ -0.72
CCDC65-205ENST00000552942 EID1Q9Y6B2 187 aa10.56□□□□□ -0.72
CCDC65-205ENST00000552942 FAM135BQ49AJ0 1406 aa10.56□□□□□ -0.72
CCDC65-205ENST00000552942 PRAG1Q86YV5 1406 aa10.56□□□□□ -0.72
CCDC65-205ENST00000552942 KIF1BO60333 1816 aa10.55□□□□□ -0.72
CCDC65-205ENST00000552942 SPATA31E1Q6ZUB1 1445 aa10.55□□□□□ -0.72
CCDC65-205ENST00000552942 METP08581 1390 aa10.55□□□□□ -0.72
CCDC65-205ENST00000552942 GTPBP6O43824 516 aaPredicted RBP10.54□□□□□ -0.72
CCDC65-205ENST00000552942 TBC1D12O60347 775 aa10.54□□□□□ -0.72
CCDC65-205ENST00000552942 TOM1O60784 492 aa10.54□□□□□ -0.72
CCDC65-205ENST00000552942 PIK3R4Q99570 1358 aa10.53□□□□□ -0.72
CCDC65-205ENST00000552942 DSG2Q14126 1118 aa10.53□□□□□ -0.72
CCDC65-205ENST00000552942 TBX22Q9Y458 520 aa10.53□□□□□ -0.72
CCDC65-205ENST00000552942 AHDC1Q5TGY3 1603 aaPredicted RBP10.52□□□□□ -0.72
CCDC65-205ENST00000552942 PDE4AP27815 886 aa10.52□□□□□ -0.73
CCDC65-205ENST00000552942 MMRN1Q13201 1228 aa10.52□□□□□ -0.73
CCDC65-205ENST00000552942 NHSL1Q5SYE7 1610 aa10.52□□□□□ -0.73
CCDC65-205ENST00000552942 LAMC1P11047 1609 aa10.51□□□□□ -0.73
CCDC65-205ENST00000552942 PTCD2Q8WV60 388 aaKnown RBP10.51□□□□□ -0.73
CCDC65-205ENST00000552942 PHLPP1O60346 1717 aa10.51□□□□□ -0.73
CCDC65-205ENST00000552942 NCOA3Q9Y6Q9 1424 aa10.5□□□□□ -0.73
CCDC65-205ENST00000552942 LRP6O75581 1613 aa10.5□□□□□ -0.73
CCDC65-205ENST00000552942 RGS17Q9UGC6 210 aaPredicted RBP10.5□□□□□ -0.73
CCDC65-205ENST00000552942 LHX6Q9UPM6 363 aa10.49□□□□□ -0.73
CCDC65-205ENST00000552942 MST1RQ04912 1400 aa10.49□□□□□ -0.73
CCDC65-205ENST00000552942 SHPRHQ149N8 1683 aa10.48□□□□□ -0.73
CCDC65-205ENST00000552942 NRXN1Q9ULB1 1477 aa10.48□□□□□ -0.73
CCDC65-205ENST00000552942 PSDA5PKW4 1024 aaPredicted RBP10.48□□□□□ -0.73
CCDC65-205ENST00000552942 CRISPLD2Q9H0B8 497 aa10.48□□□□□ -0.73
CCDC65-205ENST00000552942 DCCP43146 1447 aa10.48□□□□□ -0.73
CCDC65-205ENST00000552942 PTCH1Q13635 1447 aa10.48□□□□□ -0.73
CCDC65-205ENST00000552942 ROBO2Q9HCK4 1378 aa10.48□□□□□ -0.73
CCDC65-205ENST00000552942 PPP1R15BQ5SWA1 713 aa10.47□□□□□ -0.73
CCDC65-205ENST00000552942 KNDC1Q76NI1 1749 aa10.47□□□□□ -0.73
CCDC65-205ENST00000552942 PROSER2Q86WR7 435 aaPredicted RBP10.47□□□□□ -0.73
CCDC65-205ENST00000552942 ADGRL3Q9HAR2 1447 aa10.47□□□□□ -0.73
CCDC65-205ENST00000552942 PIK3C2GO75747 1445 aa10.46□□□□□ -0.73
CCDC65-205ENST00000552942 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.46□□□□□ -0.73
CCDC65-205ENST00000552942 MSH6P52701 1360 aa10.46□□□□□ -0.74
CCDC65-205ENST00000552942 PPP1R15AO75807 674 aaPredicted RBP10.45□□□□□ -0.74
CCDC65-205ENST00000552942 BBXQ8WY36 941 aaPredicted RBP10.45□□□□□ -0.74
CCDC65-205ENST00000552942 TECPR2O15040 1411 aa10.44□□□□□ -0.74
CCDC65-205ENST00000552942 SOCS7O14512 581 aa10.44□□□□□ -0.74
CCDC65-205ENST00000552942 PBX2P40425 430 aa10.44□□□□□ -0.74
CCDC65-205ENST00000552942 AMOTL2Q9Y2J4 779 aa10.44□□□□□ -0.74
CCDC65-205ENST00000552942 CDC42BPGQ6DT37 1551 aa10.44□□□□□ -0.74
CCDC65-205ENST00000552942 DDX27Q96GQ7 796 aaKnown RBP10.43□□□□□ -0.74
CCDC65-205ENST00000552942 LARP6Q9BRS8 491 aaKnown RBP10.43□□□□□ -0.74
CCDC65-205ENST00000552942 SLAIN2Q9P270 581 aa10.43□□□□□ -0.74
CCDC65-205ENST00000552942 RAB3GAP2Q9H2M9 1393 aa10.43□□□□□ -0.74
CCDC65-205ENST00000552942 SETD5Q9C0A6 1442 aa10.43□□□□□ -0.74
CCDC65-205ENST00000552942 ADGRF5Q8IZF2 1346 aa10.43□□□□□ -0.74
CCDC65-205ENST00000552942 ADGRB1O14514 1584 aa10.42□□□□□ -0.74
CCDC65-205ENST00000552942 RTN4Q9NQC3 1192 aaKnown RBP10.42□□□□□ -0.74
CCDC65-205ENST00000552942 MYOM2P54296 1465 aa10.41□□□□□ -0.74
CCDC65-205ENST00000552942 ANKRD13DQ6ZTN6 518 aa10.41□□□□□ -0.74
CCDC65-205ENST00000552942 BRINP3Q76B58 766 aa10.41□□□□□ -0.74
CCDC65-205ENST00000552942 UPF1Q92900 1129 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCDC65-205ENST00000552942 MPHOSPH9Q99550 1183 aa10.41□□□□□ -0.74
CCDC65-205ENST00000552942 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.41□□□□□ -0.74
CCDC65-205ENST00000552942 CCDC144AA2RUR9 1427 aa10.41□□□□□ -0.74
CCDC65-205ENST00000552942 EP400Q96L91 3159 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms