RNA–Protein interactions for RNA: ENST00000551705.1

TMEM106C-217, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 666 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-217ENST00000551705 PHRF1Q9P1Y6 1649 aaKnown RBP20.31■□□□□ 0.84
TMEM106C-217ENST00000551705 PIK3C2GO75747 1445 aa20.3■□□□□ 0.84
TMEM106C-217ENST00000551705 CHD4Q14839 1912 aa20.3■□□□□ 0.84
TMEM106C-217ENST00000551705 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
TMEM106C-217ENST00000551705 MSH5O43196 834 aa20.29■□□□□ 0.84
TMEM106C-217ENST00000551705 SPON1Q9HCB6 807 aa20.29■□□□□ 0.84
TMEM106C-217ENST00000551705 IFFO2Q5TF58 517 aa20.28■□□□□ 0.84
TMEM106C-217ENST00000551705 FAM196AQ6ZSG2 479 aa20.28■□□□□ 0.84
TMEM106C-217ENST00000551705 ZNF784Q8NCA9 323 aaPredicted RBP20.28■□□□□ 0.84
TMEM106C-217ENST00000551705 DCAF8L1A6NGE4 600 aa20.27■□□□□ 0.84
TMEM106C-217ENST00000551705 PMFBP1Q8TBY8 1022 aa20.27■□□□□ 0.84
TMEM106C-217ENST00000551705 UTRNP46939 3433 aa20.27■□□□□ 0.83
TMEM106C-217ENST00000551705 SPATA31A1Q5TZJ5 1347 aa20.27■□□□□ 0.83
TMEM106C-217ENST00000551705 RGPD3A6NKT7 1758 aaPredicted RBP20.26■□□□□ 0.83
TMEM106C-217ENST00000551705 RGPD4Q7Z3J3 1758 aa20.26■□□□□ 0.83
TMEM106C-217ENST00000551705 KCNQ2O43526 872 aa20.26■□□□□ 0.83
TMEM106C-217ENST00000551705 SPATA31E1Q6ZUB1 1445 aa20.25■□□□□ 0.83
TMEM106C-217ENST00000551705 ANKARQ7Z5J8 1434 aa20.25■□□□□ 0.83
TMEM106C-217ENST00000551705 NBPF8Q3BBV2 869 aa20.24■□□□□ 0.83
TMEM106C-217ENST00000551705 NBPF14Q5TI25 921 aa20.24■□□□□ 0.83
TMEM106C-217ENST00000551705 SBF2Q86WG5 1849 aa20.23■□□□□ 0.83
TMEM106C-217ENST00000551705 SAFB2Q14151 953 aaKnown RBP eCLIP20.22■□□□□ 0.83
TMEM106C-217ENST00000551705 PRDM11Q9NQV5 511 aa20.22■□□□□ 0.83
TMEM106C-217ENST00000551705 PARP4Q9UKK3 1724 aaKnown RBP20.21■□□□□ 0.83
TMEM106C-217ENST00000551705 ANKRD30BQ9BXX2 1392 aa20.21■□□□□ 0.83
TMEM106C-217ENST00000551705 RGL3Q3MIN7 710 aa20.2■□□□□ 0.82
TMEM106C-217ENST00000551705 KIAA0232Q92628 1395 aa20.2■□□□□ 0.82
TMEM106C-217ENST00000551705 PEAK1Q9H792 1746 aa20.19■□□□□ 0.82
TMEM106C-217ENST00000551705 STRN4Q9NRL3 753 aa20.19■□□□□ 0.82
TMEM106C-217ENST00000551705 CHRNA2Q15822 529 aa20.18■□□□□ 0.82
TMEM106C-217ENST00000551705 PIAS4Q8N2W9 510 aaPredicted RBP20.18■□□□□ 0.82
TMEM106C-217ENST00000551705 ACIN1Q9UKV3 1341 aaKnown RBP20.18■□□□□ 0.82
TMEM106C-217ENST00000551705 C1QTNF8P60827 252 aa20.17■□□□□ 0.82
TMEM106C-217ENST00000551705 SLC4A1APQ9BWU0 796 aaKnown RBP20.17■□□□□ 0.82
TMEM106C-217ENST00000551705 USP35Q9P2H5 1018 aa20.17■□□□□ 0.82
TMEM106C-217ENST00000551705 GPRASP1Q5JY77 1395 aa20.17■□□□□ 0.82
TMEM106C-217ENST00000551705 SIRT1Q96EB6 747 aa20.16■□□□□ 0.82
TMEM106C-217ENST00000551705 PRAM1Q96QH2 718 aa20.16■□□□□ 0.82
TMEM106C-217ENST00000551705 ANO8Q9HCE9 1232 aaPredicted RBP20.16■□□□□ 0.82
TMEM106C-217ENST00000551705 DLC1Q96QB1 1528 aa20.16■□□□□ 0.82
TMEM106C-217ENST00000551705 TULP4Q9NRJ4 1543 aa20.16■□□□□ 0.82
TMEM106C-217ENST00000551705 LMO7Q8WWI1 1683 aa20.16■□□□□ 0.82
TMEM106C-217ENST00000551705 ITSN1Q15811 1721 aa20.16■□□□□ 0.82
TMEM106C-217ENST00000551705 CEP350Q5VT06 3117 aa20.16■□□□□ 0.82
TMEM106C-217ENST00000551705 PRR36Q9H6K5 1346 aa20.15■□□□□ 0.82
TMEM106C-217ENST00000551705 SSH2Q76I76 1423 aa20.15■□□□□ 0.82
TMEM106C-217ENST00000551705 PDE3BQ13370 1112 aa20.14■□□□□ 0.81
TMEM106C-217ENST00000551705 PDGFDQ9GZP0 370 aaPredicted RBP20.14■□□□□ 0.81
TMEM106C-217ENST00000551705 LRRC37A3O60309 1634 aa20.13■□□□□ 0.81
TMEM106C-217ENST00000551705 BARGINQ6ZT62 677 aa20.11■□□□□ 0.81
TMEM106C-217ENST00000551705 POTEDQ86YR6 584 aa20.11■□□□□ 0.81
TMEM106C-217ENST00000551705 WNK3Q9BYP7 1800 aa20.11■□□□□ 0.81
TMEM106C-217ENST00000551705 DHX57Q6P158 1386 aaKnown RBP20.1■□□□□ 0.81
TMEM106C-217ENST00000551705 PAK3O75914 559 aaPredicted RBP20.1■□□□□ 0.81
TMEM106C-217ENST00000551705 ZBTB7AO95365 584 aa20.1■□□□□ 0.81
TMEM106C-217ENST00000551705 CFAP70Q5T0N1 1121 aa20.09■□□□□ 0.81
TMEM106C-217ENST00000551705 PPARGC1BQ86YN6 1023 aaKnown RBP20.09■□□□□ 0.81
TMEM106C-217ENST00000551705 HIRIP3Q9BW71 556 aaPredicted RBP20.09■□□□□ 0.81
TMEM106C-217ENST00000551705 C14orf93Q9H972 538 aaKnown RBP20.09■□□□□ 0.81
TMEM106C-217ENST00000551705 PTGER2P43116 358 aa20.08■□□□□ 0.81
TMEM106C-217ENST00000551705 ADGRB1O14514 1584 aa20.08■□□□□ 0.8
TMEM106C-217ENST00000551705 ADRA2BP18089 450 aa20.07■□□□□ 0.8
TMEM106C-217ENST00000551705 ZC3H6P61129 1189 aaKnown RBP20.07■□□□□ 0.8
TMEM106C-217ENST00000551705 AKAP12Q02952 1782 aa20.07■□□□□ 0.8
TMEM106C-217ENST00000551705 ATP7BP35670 1465 aa20.06■□□□□ 0.8
TMEM106C-217ENST00000551705 OVOS2A0A0G2JMS6 1433 aa20.06■□□□□ 0.8
TMEM106C-217ENST00000551705 OVOS2A0A0J9YW53 1432 aa20.06■□□□□ 0.8
TMEM106C-217ENST00000551705 OVOS2Q6IE36 1432 aa20.06■□□□□ 0.8
TMEM106C-217ENST00000551705 LARP1Q6PKG0 1096 aaKnown RBP20.06■□□□□ 0.8
TMEM106C-217ENST00000551705 POGKQ9P215 609 aa20.06■□□□□ 0.8
TMEM106C-217ENST00000551705 FHDC1Q9C0D6 1143 aaPredicted RBP20.05■□□□□ 0.8
TMEM106C-217ENST00000551705 TOPAZ1Q8N9V7 1692 aa20.05■□□□□ 0.8
TMEM106C-217ENST00000551705 EIF3AQ14152 1382 aaKnown RBP20.05■□□□□ 0.8
TMEM106C-217ENST00000551705 TCP11L2Q8N4U5 519 aa20.04■□□□□ 0.8
TMEM106C-217ENST00000551705 MINK1Q8N4C8 1332 aaPredicted RBP20.03■□□□□ 0.8
TMEM106C-217ENST00000551705 NUTM2GQ5VZR2 741 aa20.03■□□□□ 0.8
TMEM106C-217ENST00000551705 PTF1AQ7RTS3 328 aa20.03■□□□□ 0.8
TMEM106C-217ENST00000551705 NGDNQ8NEJ9 315 aaKnown RBP20.03■□□□□ 0.8
TMEM106C-217ENST00000551705 ATF5Q9Y2D1 282 aaPredicted RBP20.03■□□□□ 0.8
TMEM106C-217ENST00000551705 SHANK3Q9BYB0 1731 aa20.02■□□□□ 0.8
TMEM106C-217ENST00000551705 EVA1CP58658 441 aa20.02■□□□□ 0.8
TMEM106C-217ENST00000551705 SYT17Q9BSW7 474 aa20.02■□□□□ 0.8
TMEM106C-217ENST00000551705 ARHGEF28Q8N1W1 1705 aaKnown RBP20.01■□□□□ 0.79
TMEM106C-217ENST00000551705 COL5A2P05997 1499 aaPredicted RBP20■□□□□ 0.79
TMEM106C-217ENST00000551705 BCL11BQ9C0K0 894 aaPredicted RBP19.99■□□□□ 0.79
TMEM106C-217ENST00000551705 PLSCR1O15162 318 aa19.98■□□□□ 0.79
TMEM106C-217ENST00000551705 WASLO00401 505 aaPredicted RBP19.97■□□□□ 0.79
TMEM106C-217ENST00000551705 GIGYF1O75420 1035 aaPredicted RBP19.97■□□□□ 0.79
TMEM106C-217ENST00000551705 PROM2Q8N271 834 aa19.97■□□□□ 0.79
TMEM106C-217ENST00000551705 TRAK1Q9UPV9 953 aa19.96■□□□□ 0.79
TMEM106C-217ENST00000551705 CPDO75976 1380 aa19.95■□□□□ 0.79
TMEM106C-217ENST00000551705 SGIP1Q9BQI5 828 aa19.95■□□□□ 0.78
TMEM106C-217ENST00000551705 THRAP3Q9Y2W1 955 aaKnown RBP19.95■□□□□ 0.78
TMEM106C-217ENST00000551705 PAPPAQ13219 1627 aa19.94■□□□□ 0.78
TMEM106C-217ENST00000551705 CRB1P82279 1406 aa19.94■□□□□ 0.78
TMEM106C-217ENST00000551705 GOLGB1Q14789 3259 aaKnown RBP19.94■□□□□ 0.78
TMEM106C-217ENST00000551705 C11orf95C9JLR9 678 aaPredicted RBP19.92■□□□□ 0.78
TMEM106C-217ENST00000551705 MTFR1LQ9H019 292 aa19.91■□□□□ 0.78
TMEM106C-217ENST00000551705 USP19O94966 1318 aa19.91■□□□□ 0.78
TMEM106C-217ENST00000551705 STK32BQ9NY57 414 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms