RNA–Protein interactions for RNA: ENST00000550844.2

ATXN2-221, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-221ENST00000550844 LTV1Q96GA3 475 aaPredicted RBP12.26□□□□□ -0.45
ATXN2-221ENST00000550844 KRT28Q7Z3Y7 464 aa12.26□□□□□ -0.45
ATXN2-221ENST00000550844 NKTRP30414 1462 aaKnown RBP12.26□□□□□ -0.45
ATXN2-221ENST00000550844 ADGRL3Q9HAR2 1447 aa12.25□□□□□ -0.45
ATXN2-221ENST00000550844 CCDC146Q8IYE0 955 aa12.25□□□□□ -0.45
ATXN2-221ENST00000550844 DIP2AQ14689 1571 aa12.25□□□□□ -0.45
ATXN2-221ENST00000550844 PLEKHG3A1L390 1219 aa12.25□□□□□ -0.45
ATXN2-221ENST00000550844 HNRNPUQ00839 825 aaKnown RBP eCLIP12.25□□□□□ -0.45
ATXN2-221ENST00000550844 ZC3H6P61129 1189 aaKnown RBP12.24□□□□□ -0.45
ATXN2-221ENST00000550844 COG3Q96JB2 828 aa12.24□□□□□ -0.45
ATXN2-221ENST00000550844 XRN1Q8IZH2 1706 aaKnown RBP12.24□□□□□ -0.45
ATXN2-221ENST00000550844 BRINP3Q76B58 766 aa12.24□□□□□ -0.45
ATXN2-221ENST00000550844 MYOM1P52179 1685 aa12.24□□□□□ -0.45
ATXN2-221ENST00000550844 MYBBP1AQ9BQG0 1328 aaKnown RBP12.24□□□□□ -0.45
ATXN2-221ENST00000550844 RALBP1Q15311 655 aa12.24□□□□□ -0.45
ATXN2-221ENST00000550844 LRRC7Q96NW7 1537 aa12.23□□□□□ -0.45
ATXN2-221ENST00000550844 UBAP1LF5GYI3 381 aa12.23□□□□□ -0.45
ATXN2-221ENST00000550844 U2SURPO15042 1029 aaKnown RBP12.23□□□□□ -0.45
ATXN2-221ENST00000550844 NEUROD2Q15784 382 aa12.23□□□□□ -0.45
ATXN2-221ENST00000550844 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
ATXN2-221ENST00000550844 NALCNQ8IZF0 1738 aa12.22□□□□□ -0.45
ATXN2-221ENST00000550844 NLRP13Q86W25 1043 aa12.22□□□□□ -0.45
ATXN2-221ENST00000550844 ADAMTS8Q9UP79 889 aa12.21□□□□□ -0.45
ATXN2-221ENST00000550844 C1orf167Q5SNV9 1468 aa12.21□□□□□ -0.46
ATXN2-221ENST00000550844 PARD3Q8TEW0 1356 aa12.2□□□□□ -0.46
ATXN2-221ENST00000550844 PUS7Q96PZ0 661 aaKnown RBP12.2□□□□□ -0.46
ATXN2-221ENST00000550844 CHRNA2Q15822 529 aa12.2□□□□□ -0.46
ATXN2-221ENST00000550844 HSP90AB2PQ58FF8 381 aa12.2□□□□□ -0.46
ATXN2-221ENST00000550844 HMOX1P09601 288 aa12.2□□□□□ -0.46
ATXN2-221ENST00000550844 PNISRQ8TF01 805 aaKnown RBP12.2□□□□□ -0.46
ATXN2-221ENST00000550844 POLKQ9UBT6 870 aa12.2□□□□□ -0.46
ATXN2-221ENST00000550844 RRP7AQ9Y3A4 280 aaKnown RBP12.2□□□□□ -0.46
ATXN2-221ENST00000550844 CPSF1Q10570 1443 aaKnown RBP12.19□□□□□ -0.46
ATXN2-221ENST00000550844 CCER2I3L3R5 266 aa12.19□□□□□ -0.46
ATXN2-221ENST00000550844 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
ATXN2-221ENST00000550844 USP6P35125 1406 aa12.19□□□□□ -0.46
ATXN2-221ENST00000550844 USP32Q8NFA0 1604 aa12.18□□□□□ -0.46
ATXN2-221ENST00000550844 KNDC1Q76NI1 1749 aa12.18□□□□□ -0.46
ATXN2-221ENST00000550844 U2AF1L5P0DN76 240 aaPredicted RBP12.18□□□□□ -0.46
ATXN2-221ENST00000550844 U2AF1Q01081 240 aaKnown RBP eCLIP12.18□□□□□ -0.46
ATXN2-221ENST00000550844 MST1RQ04912 1400 aa12.17□□□□□ -0.46
ATXN2-221ENST00000550844 NUTM2BA6NNL0 878 aaPredicted RBP12.17□□□□□ -0.46
ATXN2-221ENST00000550844 NUTM2EB1AL46 878 aaPredicted RBP12.17□□□□□ -0.46
ATXN2-221ENST00000550844 AMPHP49418 695 aa12.17□□□□□ -0.46
ATXN2-221ENST00000550844 WDR43Q15061 677 aaKnown RBP eCLIP12.17□□□□□ -0.46
ATXN2-221ENST00000550844 NUTM2AQ8IVF1 878 aaPredicted RBP12.17□□□□□ -0.46
ATXN2-221ENST00000550844 USHBP1Q8N6Y0 703 aa12.16□□□□□ -0.46
ATXN2-221ENST00000550844 RBM19Q9Y4C8 960 aaKnown RBP12.16□□□□□ -0.46
ATXN2-221ENST00000550844 EDC4Q6P2E9 1401 aaKnown RBP12.15□□□□□ -0.46
ATXN2-221ENST00000550844 MAP3K19Q56UN5 1328 aa12.15□□□□□ -0.46
ATXN2-221ENST00000550844 ADAMTS2O95450 1211 aa12.14□□□□□ -0.47
ATXN2-221ENST00000550844 GCP02774 474 aa12.14□□□□□ -0.47
ATXN2-221ENST00000550844 USP35Q9P2H5 1018 aa12.14□□□□□ -0.47
ATXN2-221ENST00000550844 NINLQ9Y2I6 1382 aa12.14□□□□□ -0.47
ATXN2-221ENST00000550844 NPHP3Q7Z494 1330 aa12.14□□□□□ -0.47
ATXN2-221ENST00000550844 AEBP1Q8IUX7 1158 aa12.13□□□□□ -0.47
ATXN2-221ENST00000550844 POLR3AO14802 1390 aaPredicted RBP12.13□□□□□ -0.47
ATXN2-221ENST00000550844 FKBP8Q14318 412 aa12.13□□□□□ -0.47
ATXN2-221ENST00000550844 LRRC59Q96AG4 307 aaKnown RBP12.13□□□□□ -0.47
ATXN2-221ENST00000550844 APAF1O14727 1248 aa12.12□□□□□ -0.47
ATXN2-221ENST00000550844 AXIN2Q9Y2T1 843 aa12.12□□□□□ -0.47
ATXN2-221ENST00000550844 CDC42BPGQ6DT37 1551 aa12.12□□□□□ -0.47
ATXN2-221ENST00000550844 NWD1Q149M9 1564 aa12.12□□□□□ -0.47
ATXN2-221ENST00000550844 TOM1O60784 492 aa12.12□□□□□ -0.47
ATXN2-221ENST00000550844 CERKQ8TCT0 537 aa12.12□□□□□ -0.47
ATXN2-221ENST00000550844 XIRP1Q702N8 1843 aaKnown RBP12.12□□□□□ -0.47
ATXN2-221ENST00000550844 DIAPH1O60610 1272 aaKnown RBP12.11□□□□□ -0.47
ATXN2-221ENST00000550844 CFAP53Q96M91 514 aa12.11□□□□□ -0.47
ATXN2-221ENST00000550844 ANKARQ7Z5J8 1434 aa12.11□□□□□ -0.47
ATXN2-221ENST00000550844 FMN2Q9NZ56 1722 aa12.11□□□□□ -0.47
ATXN2-221ENST00000550844 BRD4O60885 1362 aaPredicted RBP12.1□□□□□ -0.47
ATXN2-221ENST00000550844 ADGRB2O60241 1585 aa12.1□□□□□ -0.47
ATXN2-221ENST00000550844 STRN4Q9NRL3 753 aa12.09□□□□□ -0.47
ATXN2-221ENST00000550844 EIF4A2Q14240 407 aaKnown RBP12.09□□□□□ -0.47
ATXN2-221ENST00000550844 SULT6B1Q6IMI4 303 aa12.09□□□□□ -0.47
ATXN2-221ENST00000550844 TTC21AQ8NDW8 1320 aa12.09□□□□□ -0.47
ATXN2-221ENST00000550844 SSH2Q76I76 1423 aa12.09□□□□□ -0.47
ATXN2-221ENST00000550844 CDCA7LQ96GN5 454 aa12.09□□□□□ -0.47
ATXN2-221ENST00000550844 SRCAPQ6ZRS2 3230 aa12.08□□□□□ -0.48
ATXN2-221ENST00000550844 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
ATXN2-221ENST00000550844 MSH5O43196 834 aa12.08□□□□□ -0.48
ATXN2-221ENST00000550844 PHACTR3Q96KR7 559 aa12.08□□□□□ -0.48
ATXN2-221ENST00000550844 SPATA31A3Q5VYP0 1347 aa12.08□□□□□ -0.48
ATXN2-221ENST00000550844 CSB-PGBD3P0DP91 1061 aa12.07□□□□□ -0.48
ATXN2-221ENST00000550844 PRDM11Q9NQV5 511 aa12.07□□□□□ -0.48
ATXN2-221ENST00000550844 PRKAR2BP31323 418 aa12.07□□□□□ -0.48
ATXN2-221ENST00000550844 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
ATXN2-221ENST00000550844 THUMPD2Q9BTF0 503 aaKnown RBP12.06□□□□□ -0.48
ATXN2-221ENST00000550844 EP400Q96L91 3159 aa12.06□□□□□ -0.48
ATXN2-221ENST00000550844 HOXC9P31274 260 aa12.06□□□□□ -0.48
ATXN2-221ENST00000550844 MAP2P11137 1827 aaKnown RBP12.06□□□□□ -0.48
ATXN2-221ENST00000550844 ITSN1Q15811 1721 aa12.06□□□□□ -0.48
ATXN2-221ENST00000550844 HSPA1LP34931 641 aa12.05□□□□□ -0.48
ATXN2-221ENST00000550844 DCTN1Q14203 1278 aa12.05□□□□□ -0.48
ATXN2-221ENST00000550844 NLRP2Q9NX02 1062 aa12.05□□□□□ -0.48
ATXN2-221ENST00000550844 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
ATXN2-221ENST00000550844 KIAA0232Q92628 1395 aa12.05□□□□□ -0.48
ATXN2-221ENST00000550844 IL13P35225 146 aa12.05□□□□□ -0.48
ATXN2-221ENST00000550844 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
ATXN2-221ENST00000550844 EYA1Q99502 592 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms