RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 KCNA1Q09470 495 aa9.5□□□□□ -0.89
PRDM4-206ENST00000550659 GZF1Q9H116 711 aaPredicted RBP9.5□□□□□ -0.89
PRDM4-206ENST00000550659 PUS10Q3MIT2 529 aaKnown RBP9.49□□□□□ -0.89
PRDM4-206ENST00000550659 LRCH3Q96II8 777 aa9.49□□□□□ -0.89
PRDM4-206ENST00000550659 MAFBQ9Y5Q3 323 aaPredicted RBP9.49□□□□□ -0.89
PRDM4-206ENST00000550659 PDS5BQ9NTI5 1447 aa9.48□□□□□ -0.89
PRDM4-206ENST00000550659 ATG7O95352 703 aa9.48□□□□□ -0.89
PRDM4-206ENST00000550659 NR1H3Q13133 447 aa9.48□□□□□ -0.89
PRDM4-206ENST00000550659 MRPL50Q8N5N7 158 aaKnown RBP9.48□□□□□ -0.89
PRDM4-206ENST00000550659 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.48□□□□□ -0.89
PRDM4-206ENST00000550659 SALL2Q9Y467 1007 aaPredicted RBP9.48□□□□□ -0.89
PRDM4-206ENST00000550659 THOC2Q8NI27 1593 aaKnown RBP9.48□□□□□ -0.89
PRDM4-206ENST00000550659 CEP164Q9UPV0 1460 aa9.47□□□□□ -0.89
PRDM4-206ENST00000550659 URB2Q14146 1524 aaKnown RBP9.47□□□□□ -0.89
PRDM4-206ENST00000550659 EMP3P54852 163 aa9.47□□□□□ -0.89
PRDM4-206ENST00000550659 ERCC6Q03468 1493 aa9.47□□□□□ -0.89
PRDM4-206ENST00000550659 ATP9BO43861 1147 aa9.46□□□□□ -0.9
PRDM4-206ENST00000550659 USB1Q9BQ65 265 aaKnown RBP9.46□□□□□ -0.9
PRDM4-206ENST00000550659 ZC3H4Q9UPT8 1303 aaKnown RBP9.46□□□□□ -0.9
PRDM4-206ENST00000550659 CUX1P39880 1505 aa9.46□□□□□ -0.9
PRDM4-206ENST00000550659 BRICD5Q6PL45 260 aa9.45□□□□□ -0.9
PRDM4-206ENST00000550659 BLOC1S3Q6QNY0 202 aa9.45□□□□□ -0.9
PRDM4-206ENST00000550659 RNF19BQ6ZMZ0 732 aa9.45□□□□□ -0.9
PRDM4-206ENST00000550659 TBC1D9Q6ZT07 1266 aa9.45□□□□□ -0.9
PRDM4-206ENST00000550659 ZBBXA8MT70 800 aa9.44□□□□□ -0.9
PRDM4-206ENST00000550659 ST18O60284 1047 aa9.44□□□□□ -0.9
PRDM4-206ENST00000550659 F12P00748 615 aaPredicted RBP9.44□□□□□ -0.9
PRDM4-206ENST00000550659 FBXO45P0C2W1 286 aa9.44□□□□□ -0.9
PRDM4-206ENST00000550659 MFAP1P55081 439 aaKnown RBP9.44□□□□□ -0.9
PRDM4-206ENST00000550659 RGS22Q8NE09 1264 aa9.44□□□□□ -0.9
PRDM4-206ENST00000550659 FKBPLQ9UIM3 349 aa9.44□□□□□ -0.9
PRDM4-206ENST00000550659 SYNJ1O43426 1573 aa9.44□□□□□ -0.9
PRDM4-206ENST00000550659 MRC2Q9UBG0 1479 aa9.43□□□□□ -0.9
PRDM4-206ENST00000550659 NFATC2IPQ8NCF5 419 aa9.43□□□□□ -0.9
PRDM4-206ENST00000550659 FAM205CA6NFA0 338 aa9.42□□□□□ -0.9
PRDM4-206ENST00000550659 TMEM88BA6NKF7 163 aa9.42□□□□□ -0.9
PRDM4-206ENST00000550659 PTPRNQ16849 979 aa9.42□□□□□ -0.9
PRDM4-206ENST00000550659 ADGRD1Q6QNK2 874 aa9.42□□□□□ -0.9
PRDM4-206ENST00000550659 TOPBP1Q92547 1522 aa9.41□□□□□ -0.9
PRDM4-206ENST00000550659 FMNL1O95466 1100 aaPredicted RBP9.41□□□□□ -0.9
PRDM4-206ENST00000550659 JUNDP17535 347 aa9.41□□□□□ -0.9
PRDM4-206ENST00000550659 MARVELD3Q96A59 401 aa9.41□□□□□ -0.9
PRDM4-206ENST00000550659 THAP11Q96EK4 314 aa9.41□□□□□ -0.9
PRDM4-206ENST00000550659 VRTNQ9H8Y1 702 aa9.41□□□□□ -0.9
PRDM4-206ENST00000550659 WDR62O43379 1518 aa9.41□□□□□ -0.9
PRDM4-206ENST00000550659 NR1I2O75469 434 aa9.4□□□□□ -0.9
PRDM4-206ENST00000550659 PPP4CP60510 307 aa9.4□□□□□ -0.9
PRDM4-206ENST00000550659 ELOAQ14241 798 aaKnown RBP9.4□□□□□ -0.9
PRDM4-206ENST00000550659 CDCA8Q53HL2 280 aa9.4□□□□□ -0.9
PRDM4-206ENST00000550659 SCUBE3Q8IX30 993 aa9.4□□□□□ -0.9
PRDM4-206ENST00000550659 ANKK1Q8NFD2 765 aa9.4□□□□□ -0.9
PRDM4-206ENST00000550659 DNMBPQ6XZF7 1577 aa9.4□□□□□ -0.9
PRDM4-206ENST00000550659 WRNQ14191 1432 aaPredicted RBP eCLIP9.39□□□□□ -0.91
PRDM4-206ENST00000550659 CARNS1A5YM72 827 aa9.39□□□□□ -0.91
PRDM4-206ENST00000550659 SOWAHBA6NEL2 793 aa9.39□□□□□ -0.91
PRDM4-206ENST00000550659 HRO43593 1189 aa9.39□□□□□ -0.91
PRDM4-206ENST00000550659 APLP1P51693 650 aa9.39□□□□□ -0.91
PRDM4-206ENST00000550659 LSM11P83369 360 aaKnown RBP eCLIP9.39□□□□□ -0.91
PRDM4-206ENST00000550659 KANK4Q5T7N3 995 aaPredicted RBP9.39□□□□□ -0.91
PRDM4-206ENST00000550659 BIVM-ERCC5R4GMW8 1640 aa9.38□□□□□ -0.91
PRDM4-206ENST00000550659 MAP10Q9P2G4 905 aa9.38□□□□□ -0.91
PRDM4-206ENST00000550659 HPS5Q9UPZ3 1129 aa9.38□□□□□ -0.91
PRDM4-206ENST00000550659 MTMR7Q9Y216 660 aa9.38□□□□□ -0.91
PRDM4-206ENST00000550659 GPSM3Q9Y4H4 160 aa9.38□□□□□ -0.91
PRDM4-206ENST00000550659 PCDHB3Q9Y5E6 796 aa9.38□□□□□ -0.91
PRDM4-206ENST00000550659 PIK3CDO00329 1044 aa9.37□□□□□ -0.91
PRDM4-206ENST00000550659 B4GALNT3Q6L9W6 998 aa9.37□□□□□ -0.91
PRDM4-206ENST00000550659 PLEKHM2Q8IWE5 1019 aa9.37□□□□□ -0.91
PRDM4-206ENST00000550659 ZNF592Q92610 1267 aa9.37□□□□□ -0.91
PRDM4-206ENST00000550659 HS3ST6Q96QI5 342 aa9.37□□□□□ -0.91
PRDM4-206ENST00000550659 TSR3Q9UJK0 312 aaKnown RBP9.37□□□□□ -0.91
PRDM4-206ENST00000550659 TOP2BQ02880 1626 aa9.37□□□□□ -0.91
PRDM4-206ENST00000550659 CUX2O14529 1486 aa9.36□□□□□ -0.91
PRDM4-206ENST00000550659 GOLGA8CPA6NN73 597 aa9.36□□□□□ -0.91
PRDM4-206ENST00000550659 MSS51Q4VC12 460 aa9.36□□□□□ -0.91
PRDM4-206ENST00000550659 GPKOWQ92917 476 aaPredicted RBP eCLIP9.36□□□□□ -0.91
PRDM4-206ENST00000550659 POLA1P09884 1462 aaPredicted RBP9.35□□□□□ -0.91
PRDM4-206ENST00000550659 FGD5Q6ZNL6 1462 aa9.35□□□□□ -0.91
PRDM4-206ENST00000550659 USP17L3A6NCW0 530 aa9.35□□□□□ -0.91
PRDM4-206ENST00000550659 USP17L4A6NCW7 530 aa9.35□□□□□ -0.91
PRDM4-206ENST00000550659 MCCD1P59942 119 aaPredicted RBP9.35□□□□□ -0.91
PRDM4-206ENST00000550659 USP17L2Q6R6M4 530 aa9.35□□□□□ -0.91
PRDM4-206ENST00000550659 USP17L1Q7RTZ2 530 aa9.35□□□□□ -0.91
PRDM4-206ENST00000550659 ARMC2Q8NEN0 867 aa9.35□□□□□ -0.91
PRDM4-206ENST00000550659 IVNS1ABPQ9Y6Y0 642 aa9.35□□□□□ -0.91
PRDM4-206ENST00000550659 RAD54L2Q9Y4B4 1467 aa9.34□□□□□ -0.91
PRDM4-206ENST00000550659 POTEB3A0JP26 581 aa9.34□□□□□ -0.91
PRDM4-206ENST00000550659 USP17L5A8MUK1 530 aa9.34□□□□□ -0.91
PRDM4-206ENST00000550659 CCNYL3P0C7X3 344 aa9.34□□□□□ -0.91
PRDM4-206ENST00000550659 SKIP12755 728 aa9.34□□□□□ -0.91
PRDM4-206ENST00000550659 CTHP32929 405 aa9.34□□□□□ -0.91
PRDM4-206ENST00000550659 PDXDC2PQ6P474 469 aa9.34□□□□□ -0.91
PRDM4-206ENST00000550659 POTEBQ6S5H4 581 aa9.34□□□□□ -0.91
PRDM4-206ENST00000550659 STAC3Q96MF2 364 aa9.34□□□□□ -0.91
PRDM4-206ENST00000550659 DXOO77932 396 aaKnown RBP9.33□□□□□ -0.92
PRDM4-206ENST00000550659 BCAMP50895 628 aa9.33□□□□□ -0.92
PRDM4-206ENST00000550659 PTK2Q05397 1052 aa9.33□□□□□ -0.92
PRDM4-206ENST00000550659 EVA1BQ9NVM1 165 aa9.33□□□□□ -0.92
PRDM4-206ENST00000550659 ZMIZ1Q9ULJ6 1067 aa9.33□□□□□ -0.92
PRDM4-206ENST00000550659 TARBP1Q13395 1621 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms