RNA–Protein interactions for RNA: ENST00000548346.1

NPIPB12-203, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 2

Gene NPIPB12, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-203ENST00000548346 PHOX2BQ99453 314 aa8.41□□□□□ -1.06
NPIPB12-203ENST00000548346 C3P01024 1663 aa8.4□□□□□ -1.06
NPIPB12-203ENST00000548346 GNPATO15228 680 aa8.4□□□□□ -1.06
NPIPB12-203ENST00000548346 SLC10A3P09131 477 aa8.4□□□□□ -1.06
NPIPB12-203ENST00000548346 HSPA1LP34931 641 aa8.4□□□□□ -1.06
NPIPB12-203ENST00000548346 HDGFP51858 240 aaKnown RBP8.4□□□□□ -1.06
NPIPB12-203ENST00000548346 SMYD5Q6GMV2 418 aa8.4□□□□□ -1.06
NPIPB12-203ENST00000548346 NKX2-3Q8TAU0 364 aa8.4□□□□□ -1.06
NPIPB12-203ENST00000548346 CAMSAP1Q5T5Y3 1602 aa8.4□□□□□ -1.07
NPIPB12-203ENST00000548346 KDM5CP41229 1560 aa8.39□□□□□ -1.07
NPIPB12-203ENST00000548346 AGLP35573 1532 aa8.39□□□□□ -1.07
NPIPB12-203ENST00000548346 NPATQ14207 1427 aa8.39□□□□□ -1.07
NPIPB12-203ENST00000548346 RGS20O76081 388 aa8.39□□□□□ -1.07
NPIPB12-203ENST00000548346 NLRP7Q8WX94 980 aa8.39□□□□□ -1.07
NPIPB12-203ENST00000548346 IL21Q9HBE4 155 aa8.39□□□□□ -1.07
NPIPB12-203ENST00000548346 PLA2R1Q13018 1463 aa8.38□□□□□ -1.07
NPIPB12-203ENST00000548346 ZNF518AQ6AHZ1 1483 aa8.38□□□□□ -1.07
NPIPB12-203ENST00000548346 COPS2P61201 443 aa8.38□□□□□ -1.07
NPIPB12-203ENST00000548346 TCOF1Q13428 1488 aaKnown RBP8.38□□□□□ -1.07
NPIPB12-203ENST00000548346 CNTLNQ9NXG0 1405 aa8.37□□□□□ -1.07
NPIPB12-203ENST00000548346 DIP2CQ9Y2E4 1556 aa8.37□□□□□ -1.07
NPIPB12-203ENST00000548346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.37□□□□□ -1.07
NPIPB12-203ENST00000548346 BLOC1S3Q6QNY0 202 aa8.36□□□□□ -1.07
NPIPB12-203ENST00000548346 GPIHBP1Q8IV16 184 aa8.36□□□□□ -1.07
NPIPB12-203ENST00000548346 PCGF6Q9BYE7 350 aa8.36□□□□□ -1.07
NPIPB12-203ENST00000548346 MLH3Q9UHC1 1453 aa8.35□□□□□ -1.07
NPIPB12-203ENST00000548346 OATP04181 439 aa8.35□□□□□ -1.07
NPIPB12-203ENST00000548346 EFCAB2Q5VUJ9 269 aa8.35□□□□□ -1.07
NPIPB12-203ENST00000548346 CFHP08603 1231 aa8.34□□□□□ -1.07
NPIPB12-203ENST00000548346 PPP1R18Q6NYC8 613 aa8.34□□□□□ -1.07
NPIPB12-203ENST00000548346 ZNF142P52746 1687 aaPredicted RBP8.34□□□□□ -1.08
NPIPB12-203ENST00000548346 TLL1O43897 1013 aa8.33□□□□□ -1.08
NPIPB12-203ENST00000548346 TOM1O60784 492 aa8.33□□□□□ -1.08
NPIPB12-203ENST00000548346 AFAP1Q8N556 730 aa8.33□□□□□ -1.08
NPIPB12-203ENST00000548346 PCDHB3Q9Y5E6 796 aa8.33□□□□□ -1.08
NPIPB12-203ENST00000548346 MROH2AA6NES4 1674 aa8.33□□□□□ -1.08
NPIPB12-203ENST00000548346 CPS1P31327 1500 aa8.33□□□□□ -1.08
NPIPB12-203ENST00000548346 ABCA6Q8N139 1617 aa8.32□□□□□ -1.08
NPIPB12-203ENST00000548346 ACTN4O43707 911 aaKnown RBP8.32□□□□□ -1.08
NPIPB12-203ENST00000548346 ZPR1O75312 459 aa8.32□□□□□ -1.08
NPIPB12-203ENST00000548346 PIP4K2BP78356 416 aa8.32□□□□□ -1.08
NPIPB12-203ENST00000548346 NECTIN2Q92692 538 aa8.32□□□□□ -1.08
NPIPB12-203ENST00000548346 ESF1Q9H501 851 aaKnown RBP8.32□□□□□ -1.08
NPIPB12-203ENST00000548346 ALKQ9UM73 1620 aa8.32□□□□□ -1.08
NPIPB12-203ENST00000548346 RGS17Q9UGC6 210 aaPredicted RBP8.31□□□□□ -1.08
NPIPB12-203ENST00000548346 ZMYM3Q14202 1370 aa8.31□□□□□ -1.08
NPIPB12-203ENST00000548346 CEP170BQ9Y4F5 1589 aaPredicted RBP8.31□□□□□ -1.08
NPIPB12-203ENST00000548346 PTPRKQ15262 1439 aa8.3□□□□□ -1.08
NPIPB12-203ENST00000548346 CDK13Q14004 1512 aaKnown RBP8.3□□□□□ -1.08
NPIPB12-203ENST00000548346 MYO3AQ8NEV4 1616 aa8.29□□□□□ -1.08
NPIPB12-203ENST00000548346 MYO5CQ9NQX4 1742 aa8.29□□□□□ -1.08
NPIPB12-203ENST00000548346 SLC4A3P48751 1232 aa8.29□□□□□ -1.08
NPIPB12-203ENST00000548346 EMID1Q96A84 441 aaPredicted RBP8.29□□□□□ -1.08
NPIPB12-203ENST00000548346 SHANK2Q9UPX8 1470 aa8.29□□□□□ -1.08
NPIPB12-203ENST00000548346 SRCAPQ6ZRS2 3230 aa8.29□□□□□ -1.08
NPIPB12-203ENST00000548346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.28□□□□□ -1.08
NPIPB12-203ENST00000548346 PRR14Q9BWN1 585 aa8.28□□□□□ -1.08
NPIPB12-203ENST00000548346 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.28□□□□□ -1.08
NPIPB12-203ENST00000548346 DAXXQ9UER7 740 aaPredicted RBP8.28□□□□□ -1.08
NPIPB12-203ENST00000548346 ARHGAP5Q13017 1502 aa8.27□□□□□ -1.09
NPIPB12-203ENST00000548346 ABCC1P33527 1531 aa8.26□□□□□ -1.09
NPIPB12-203ENST00000548346 TRIM26Q12899 539 aaPredicted RBP8.26□□□□□ -1.09
NPIPB12-203ENST00000548346 MAP2K5Q13163 448 aa8.26□□□□□ -1.09
NPIPB12-203ENST00000548346 PUS10Q3MIT2 529 aaKnown RBP8.26□□□□□ -1.09
NPIPB12-203ENST00000548346 KMT5BQ4FZB7 885 aa8.26□□□□□ -1.09
NPIPB12-203ENST00000548346 IRX2Q9BZI1 471 aaPredicted RBP8.26□□□□□ -1.09
NPIPB12-203ENST00000548346 VWDEQ8N2E2 1590 aa8.26□□□□□ -1.09
NPIPB12-203ENST00000548346 NEURL4Q96JN8 1562 aa8.26□□□□□ -1.09
NPIPB12-203ENST00000548346 A2ML1A8K2U0 1454 aa8.26□□□□□ -1.09
NPIPB12-203ENST00000548346 KIDINS220Q9ULH0 1771 aa8.25□□□□□ -1.09
NPIPB12-203ENST00000548346 DDX11L8A8MPP1 907 aa8.25□□□□□ -1.09
NPIPB12-203ENST00000548346 IRF6O14896 467 aa8.25□□□□□ -1.09
NPIPB12-203ENST00000548346 PRKD2Q9BZL6 878 aa8.25□□□□□ -1.09
NPIPB12-203ENST00000548346 KIF14Q15058 1648 aa8.25□□□□□ -1.09
NPIPB12-203ENST00000548346 TROQ12816 1431 aaPredicted RBP8.24□□□□□ -1.09
NPIPB12-203ENST00000548346 RNF223E7ERA6 249 aa8.24□□□□□ -1.09
NPIPB12-203ENST00000548346 PPARGC1BQ86YN6 1023 aaKnown RBP8.24□□□□□ -1.09
NPIPB12-203ENST00000548346 DNMT1P26358 1616 aaKnown RBP8.23□□□□□ -1.09
NPIPB12-203ENST00000548346 LCE2BO14633 110 aa8.23□□□□□ -1.09
NPIPB12-203ENST00000548346 FUT2Q10981 343 aa8.23□□□□□ -1.09
NPIPB12-203ENST00000548346 SCUBE3Q8IX30 993 aa8.23□□□□□ -1.09
NPIPB12-203ENST00000548346 CCDC102AQ96A19 550 aa8.23□□□□□ -1.09
NPIPB12-203ENST00000548346 PLXNC1O60486 1568 aa8.22□□□□□ -1.09
NPIPB12-203ENST00000548346 MED14O60244 1454 aa8.22□□□□□ -1.09
NPIPB12-203ENST00000548346 S1PR4O95977 384 aa8.22□□□□□ -1.09
NPIPB12-203ENST00000548346 GCGRP47871 477 aa8.22□□□□□ -1.09
NPIPB12-203ENST00000548346 MORN1Q5T089 497 aa8.22□□□□□ -1.09
NPIPB12-203ENST00000548346 LMOD2Q6P5Q4 547 aa8.22□□□□□ -1.09
NPIPB12-203ENST00000548346 POTEAQ6S8J7 498 aa8.22□□□□□ -1.09
NPIPB12-203ENST00000548346 RDH13Q8NBN7 331 aa8.22□□□□□ -1.09
NPIPB12-203ENST00000548346 CDK11AQ9UQ88 783 aaPredicted RBP8.22□□□□□ -1.09
NPIPB12-203ENST00000548346 SUPT6HQ7KZ85 1726 aaKnown RBP8.22□□□□□ -1.09
NPIPB12-203ENST00000548346 ITSN2Q9NZM3 1697 aa8.21□□□□□ -1.09
NPIPB12-203ENST00000548346 POLR1AO95602 1720 aaPredicted RBP8.21□□□□□ -1.09
NPIPB12-203ENST00000548346 PPEF1O14829 653 aaPredicted RBP8.21□□□□□ -1.1
NPIPB12-203ENST00000548346 SAMD9LQ8IVG5 1584 aa8.21□□□□□ -1.1
NPIPB12-203ENST00000548346 RNF17Q9BXT8 1623 aaKnown RBP8.21□□□□□ -1.1
NPIPB12-203ENST00000548346 CLTCQ00610 1675 aaKnown RBP8.21□□□□□ -1.1
NPIPB12-203ENST00000548346 CLIP1P30622 1438 aa8.2□□□□□ -1.1
NPIPB12-203ENST00000548346 CDC42BPBQ9Y5S2 1711 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms