RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 ADGRF5Q8IZF2 1346 aa14.04□□□□□ -0.16
CDK4-205ENST00000547853 ITGAEP38570 1179 aa14.03□□□□□ -0.16
CDK4-205ENST00000547853 CAMKK2Q96RR4 588 aa14.03□□□□□ -0.16
CDK4-205ENST00000547853 PHF8Q9UPP1 1060 aa14.03□□□□□ -0.16
CDK4-205ENST00000547853 SPATA31A5Q5VU36 1347 aa14.03□□□□□ -0.16
CDK4-205ENST00000547853 SPATA31A7Q8IWB4 1347 aa14.03□□□□□ -0.16
CDK4-205ENST00000547853 NINLQ9Y2I6 1382 aa14.03□□□□□ -0.16
CDK4-205ENST00000547853 NRKQ7Z2Y5 1582 aa14.03□□□□□ -0.16
CDK4-205ENST00000547853 MYOM1P52179 1685 aa14.03□□□□□ -0.16
CDK4-205ENST00000547853 UTRNP46939 3433 aa14.02□□□□□ -0.16
CDK4-205ENST00000547853 ANKARQ7Z5J8 1434 aa14.02□□□□□ -0.16
CDK4-205ENST00000547853 PLEKHG5O94827 1062 aa14.02□□□□□ -0.17
CDK4-205ENST00000547853 STK26Q9P289 416 aa14.02□□□□□ -0.17
CDK4-205ENST00000547853 CHD4Q14839 1912 aa14.02□□□□□ -0.17
CDK4-205ENST00000547853 BTG4Q9NY30 223 aa14.01□□□□□ -0.17
CDK4-205ENST00000547853 ITSN1Q15811 1721 aa14.01□□□□□ -0.17
CDK4-205ENST00000547853 PARP4Q9UKK3 1724 aaKnown RBP14.01□□□□□ -0.17
CDK4-205ENST00000547853 SBF2Q86WG5 1849 aa14□□□□□ -0.17
CDK4-205ENST00000547853 PEAK1Q9H792 1746 aa14□□□□□ -0.17
CDK4-205ENST00000547853 DLC1Q96QB1 1528 aa14□□□□□ -0.17
CDK4-205ENST00000547853 PSME1Q06323 249 aa13.99□□□□□ -0.17
CDK4-205ENST00000547853 ANKRD30BQ9BXX2 1392 aa13.98□□□□□ -0.17
CDK4-205ENST00000547853 LMO7Q8WWI1 1683 aa13.98□□□□□ -0.17
CDK4-205ENST00000547853 TMEM132EQ6IEE7 984 aa13.98□□□□□ -0.17
CDK4-205ENST00000547853 WNK3Q9BYP7 1800 aa13.97□□□□□ -0.17
CDK4-205ENST00000547853 TULP4Q9NRJ4 1543 aa13.97□□□□□ -0.17
CDK4-205ENST00000547853 TRIM37O94972 964 aa13.97□□□□□ -0.17
CDK4-205ENST00000547853 LMOD2Q6P5Q4 547 aa13.97□□□□□ -0.17
CDK4-205ENST00000547853 DHX57Q6P158 1386 aaKnown RBP13.96□□□□□ -0.17
CDK4-205ENST00000547853 SPATA31A1Q5TZJ5 1347 aa13.95□□□□□ -0.18
CDK4-205ENST00000547853 LRRC37A3O60309 1634 aa13.95□□□□□ -0.18
CDK4-205ENST00000547853 TOPAZ1Q8N9V7 1692 aa13.95□□□□□ -0.18
CDK4-205ENST00000547853 ADGRB1O14514 1584 aa13.94□□□□□ -0.18
CDK4-205ENST00000547853 FAM196AQ6ZSG2 479 aa13.94□□□□□ -0.18
CDK4-205ENST00000547853 SIRT1Q96EB6 747 aa13.94□□□□□ -0.18
CDK4-205ENST00000547853 APBA3O96018 575 aa13.92□□□□□ -0.18
CDK4-205ENST00000547853 KIAA0232Q92628 1395 aa13.92□□□□□ -0.18
CDK4-205ENST00000547853 CEP350Q5VT06 3117 aa13.92□□□□□ -0.18
CDK4-205ENST00000547853 SSH2Q76I76 1423 aa13.91□□□□□ -0.18
CDK4-205ENST00000547853 PMFBP1Q8TBY8 1022 aa13.91□□□□□ -0.18
CDK4-205ENST00000547853 SPON1Q9HCB6 807 aa13.91□□□□□ -0.18
CDK4-205ENST00000547853 PPP1R1BQ9UD71 204 aaPredicted RBP13.91□□□□□ -0.18
CDK4-205ENST00000547853 ATP7BP35670 1465 aa13.91□□□□□ -0.18
CDK4-205ENST00000547853 ARHGEF28Q8N1W1 1705 aaKnown RBP13.9□□□□□ -0.18
CDK4-205ENST00000547853 MIER1Q8N108 512 aa13.9□□□□□ -0.18
CDK4-205ENST00000547853 ZNF784Q8NCA9 323 aaPredicted RBP13.9□□□□□ -0.18
CDK4-205ENST00000547853 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
CDK4-205ENST00000547853 PRDM11Q9NQV5 511 aa13.9□□□□□ -0.18
CDK4-205ENST00000547853 AKAP12Q02952 1782 aa13.9□□□□□ -0.18
CDK4-205ENST00000547853 PRR36Q9H6K5 1346 aa13.9□□□□□ -0.19
CDK4-205ENST00000547853 GPRASP1Q5JY77 1395 aa13.89□□□□□ -0.19
CDK4-205ENST00000547853 KCNQ2O43526 872 aa13.89□□□□□ -0.19
CDK4-205ENST00000547853 PRAM1Q96QH2 718 aa13.88□□□□□ -0.19
CDK4-205ENST00000547853 EIF3AQ14152 1382 aaKnown RBP13.87□□□□□ -0.19
CDK4-205ENST00000547853 SAFB2Q14151 953 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDK4-205ENST00000547853 NBPF8Q3BBV2 869 aa13.87□□□□□ -0.19
CDK4-205ENST00000547853 RGL3Q3MIN7 710 aa13.87□□□□□ -0.19
CDK4-205ENST00000547853 NBPF14Q5TI25 921 aa13.87□□□□□ -0.19
CDK4-205ENST00000547853 SENP3-EIF4A1A0A087X0R7 540 aa13.86□□□□□ -0.19
CDK4-205ENST00000547853 DCAF8L1A6NGE4 600 aa13.86□□□□□ -0.19
CDK4-205ENST00000547853 IFFO2Q5TF58 517 aa13.86□□□□□ -0.19
CDK4-205ENST00000547853 BARGINQ6ZT62 677 aa13.86□□□□□ -0.19
CDK4-205ENST00000547853 C14orf93Q9H972 538 aaKnown RBP13.86□□□□□ -0.19
CDK4-205ENST00000547853 ANO8Q9HCE9 1232 aaPredicted RBP13.85□□□□□ -0.19
CDK4-205ENST00000547853 OVOS2A0A0G2JMS6 1433 aa13.84□□□□□ -0.19
CDK4-205ENST00000547853 OVOS2A0A0J9YW53 1432 aa13.84□□□□□ -0.19
CDK4-205ENST00000547853 OVOS2Q6IE36 1432 aa13.84□□□□□ -0.19
CDK4-205ENST00000547853 CHRNA2Q15822 529 aa13.84□□□□□ -0.19
CDK4-205ENST00000547853 STRN4Q9NRL3 753 aa13.84□□□□□ -0.19
CDK4-205ENST00000547853 PAPPAQ13219 1627 aa13.83□□□□□ -0.2
CDK4-205ENST00000547853 COL5A2P05997 1499 aaPredicted RBP13.83□□□□□ -0.2
CDK4-205ENST00000547853 CFAP70Q5T0N1 1121 aa13.82□□□□□ -0.2
CDK4-205ENST00000547853 TIMELESSQ9UNS1 1208 aa13.82□□□□□ -0.2
CDK4-205ENST00000547853 SHANK3Q9BYB0 1731 aa13.81□□□□□ -0.2
CDK4-205ENST00000547853 PTGER2P43116 358 aa13.81□□□□□ -0.2
CDK4-205ENST00000547853 C1QTNF8P60827 252 aa13.81□□□□□ -0.2
CDK4-205ENST00000547853 PDE3BQ13370 1112 aa13.81□□□□□ -0.2
CDK4-205ENST00000547853 PDGFDQ9GZP0 370 aaPredicted RBP13.81□□□□□ -0.2
CDK4-205ENST00000547853 USP35Q9P2H5 1018 aa13.81□□□□□ -0.2
CDK4-205ENST00000547853 GOLGB1Q14789 3259 aaKnown RBP13.81□□□□□ -0.2
CDK4-205ENST00000547853 CPDO75976 1380 aa13.81□□□□□ -0.2
CDK4-205ENST00000547853 HIRIP3Q9BW71 556 aaPredicted RBP13.8□□□□□ -0.2
CDK4-205ENST00000547853 COL24A1Q17RW2 1714 aa13.79□□□□□ -0.2
CDK4-205ENST00000547853 LARP1Q6PKG0 1096 aaKnown RBP13.79□□□□□ -0.2
CDK4-205ENST00000547853 YTHDC1Q96MU7 727 aaKnown RBP13.79□□□□□ -0.2
CDK4-205ENST00000547853 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
CDK4-205ENST00000547853 COL18A1P39060 1754 aa13.78□□□□□ -0.2
CDK4-205ENST00000547853 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
CDK4-205ENST00000547853 TCP11L2Q8N4U5 519 aa13.78□□□□□ -0.2
CDK4-205ENST00000547853 POGKQ9P215 609 aa13.78□□□□□ -0.2
CDK4-205ENST00000547853 MINK1Q8N4C8 1332 aaPredicted RBP13.78□□□□□ -0.2
CDK4-205ENST00000547853 POLR3AO14802 1390 aaPredicted RBP13.77□□□□□ -0.21
CDK4-205ENST00000547853 USP19O94966 1318 aa13.77□□□□□ -0.21
CDK4-205ENST00000547853 ZBTB7AO95365 584 aa13.77□□□□□ -0.21
CDK4-205ENST00000547853 ZC3H6P61129 1189 aaKnown RBP13.77□□□□□ -0.21
CDK4-205ENST00000547853 QSER1Q2KHR3 1735 aa13.77□□□□□ -0.21
CDK4-205ENST00000547853 CRB1P82279 1406 aa13.76□□□□□ -0.21
CDK4-205ENST00000547853 WASLO00401 505 aaPredicted RBP13.76□□□□□ -0.21
CDK4-205ENST00000547853 NGDNQ8NEJ9 315 aaKnown RBP13.76□□□□□ -0.21
CDK4-205ENST00000547853 BCL9O00512 1426 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms