RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 GPRASP1Q5JY77 1395 aa13.86□□□□□ -0.19
SSH1-205ENST00000546812 DHX57Q6P158 1386 aaKnown RBP13.86□□□□□ -0.19
SSH1-205ENST00000546812 SPON1Q9HCB6 807 aa13.86□□□□□ -0.19
SSH1-205ENST00000546812 PPP1R1BQ9UD71 204 aaPredicted RBP13.86□□□□□ -0.19
SSH1-205ENST00000546812 ABCA3Q99758 1704 aa13.85□□□□□ -0.19
SSH1-205ENST00000546812 ACIN1Q9UKV3 1341 aaKnown RBP13.85□□□□□ -0.19
SSH1-205ENST00000546812 THSD7AQ9UPZ6 1657 aa13.85□□□□□ -0.19
SSH1-205ENST00000546812 ADGRB2O60241 1585 aa13.84□□□□□ -0.19
SSH1-205ENST00000546812 COL14A1Q05707 1796 aaKnown RBP13.84□□□□□ -0.19
SSH1-205ENST00000546812 KCNQ2O43526 872 aa13.84□□□□□ -0.19
SSH1-205ENST00000546812 CFAP70Q5T0N1 1121 aa13.84□□□□□ -0.19
SSH1-205ENST00000546812 POGKQ9P215 609 aa13.84□□□□□ -0.19
SSH1-205ENST00000546812 TNS1Q9HBL0 1735 aaKnown RBP13.84□□□□□ -0.19
SSH1-205ENST00000546812 NINLQ9Y2I6 1382 aa13.83□□□□□ -0.2
SSH1-205ENST00000546812 PDE3BQ13370 1112 aa13.82□□□□□ -0.2
SSH1-205ENST00000546812 STRN4Q9NRL3 753 aa13.82□□□□□ -0.2
SSH1-205ENST00000546812 RGPD8O14715 1765 aaPredicted RBP13.81□□□□□ -0.2
SSH1-205ENST00000546812 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
SSH1-205ENST00000546812 CHRNA2Q15822 529 aa13.81□□□□□ -0.2
SSH1-205ENST00000546812 BARGINQ6ZT62 677 aa13.81□□□□□ -0.2
SSH1-205ENST00000546812 KIAA0232Q92628 1395 aa13.81□□□□□ -0.2
SSH1-205ENST00000546812 NGDNQ8NEJ9 315 aaKnown RBP13.8□□□□□ -0.2
SSH1-205ENST00000546812 HIRIP3Q9BW71 556 aaPredicted RBP13.8□□□□□ -0.2
SSH1-205ENST00000546812 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
SSH1-205ENST00000546812 IFT172Q9UG01 1749 aa13.8□□□□□ -0.2
SSH1-205ENST00000546812 PRR36Q9H6K5 1346 aa13.8□□□□□ -0.2
SSH1-205ENST00000546812 UTRNP46939 3433 aa13.79□□□□□ -0.2
SSH1-205ENST00000546812 MPHOSPH9Q99550 1183 aa13.79□□□□□ -0.2
SSH1-205ENST00000546812 EIF3AQ14152 1382 aaKnown RBP13.79□□□□□ -0.2
SSH1-205ENST00000546812 TRPM3Q9HCF6 1732 aaPredicted RBP13.78□□□□□ -0.2
SSH1-205ENST00000546812 EVA1CP58658 441 aa13.78□□□□□ -0.2
SSH1-205ENST00000546812 WASLO00401 505 aaPredicted RBP13.77□□□□□ -0.21
SSH1-205ENST00000546812 ZC3H6P61129 1189 aaKnown RBP13.77□□□□□ -0.21
SSH1-205ENST00000546812 ZNF784Q8NCA9 323 aaPredicted RBP13.77□□□□□ -0.21
SSH1-205ENST00000546812 ALS2Q96Q42 1657 aa13.77□□□□□ -0.21
SSH1-205ENST00000546812 DLC1Q96QB1 1528 aa13.76□□□□□ -0.21
SSH1-205ENST00000546812 MINK1Q8N4C8 1332 aaPredicted RBP13.76□□□□□ -0.21
SSH1-205ENST00000546812 TCP11L2Q8N4U5 519 aa13.76□□□□□ -0.21
SSH1-205ENST00000546812 TRAK1Q9UPV9 953 aa13.76□□□□□ -0.21
SSH1-205ENST00000546812 C11orf95C9JLR9 678 aaPredicted RBP13.75□□□□□ -0.21
SSH1-205ENST00000546812 LARP1Q6PKG0 1096 aaKnown RBP13.75□□□□□ -0.21
SSH1-205ENST00000546812 SSH2Q76I76 1423 aa13.74□□□□□ -0.21
SSH1-205ENST00000546812 THRAP3Q9Y2W1 955 aaKnown RBP13.74□□□□□ -0.21
SSH1-205ENST00000546812 RREB1Q92766 1687 aa13.74□□□□□ -0.21
SSH1-205ENST00000546812 NUP188Q5SRE5 1749 aa13.73□□□□□ -0.21
SSH1-205ENST00000546812 PLSCR1O15162 318 aa13.73□□□□□ -0.21
SSH1-205ENST00000546812 TULP4Q9NRJ4 1543 aa13.73□□□□□ -0.21
SSH1-205ENST00000546812 SENP3-EIF4A1A0A087X0R7 540 aa13.72□□□□□ -0.21
SSH1-205ENST00000546812 NUTM2GQ5VZR2 741 aa13.72□□□□□ -0.21
SSH1-205ENST00000546812 NUDT16Q96DE0 195 aaKnown RBP13.71□□□□□ -0.21
SSH1-205ENST00000546812 ANO8Q9HCE9 1232 aaPredicted RBP13.71□□□□□ -0.21
SSH1-205ENST00000546812 CRYBG1Q9Y4K1 1723 aa13.7□□□□□ -0.22
SSH1-205ENST00000546812 C1QTNF8P60827 252 aa13.7□□□□□ -0.22
SSH1-205ENST00000546812 IFFO2Q5TF58 517 aa13.7□□□□□ -0.22
SSH1-205ENST00000546812 PDGFDQ9GZP0 370 aaPredicted RBP13.7□□□□□ -0.22
SSH1-205ENST00000546812 CPDO75976 1380 aa13.7□□□□□ -0.22
SSH1-205ENST00000546812 ZBTB7AO95365 584 aa13.69□□□□□ -0.22
SSH1-205ENST00000546812 PTGER2P43116 358 aa13.69□□□□□ -0.22
SSH1-205ENST00000546812 ADGRB1O14514 1584 aa13.69□□□□□ -0.22
SSH1-205ENST00000546812 CAMTA1Q9Y6Y1 1673 aa13.69□□□□□ -0.22
SSH1-205ENST00000546812 ATP7BP35670 1465 aa13.68□□□□□ -0.22
SSH1-205ENST00000546812 BCL11BQ9C0K0 894 aaPredicted RBP13.68□□□□□ -0.22
SSH1-205ENST00000546812 OVOS2A0A0G2JMS6 1433 aa13.67□□□□□ -0.22
SSH1-205ENST00000546812 OVOS2A0A0J9YW53 1432 aa13.67□□□□□ -0.22
SSH1-205ENST00000546812 OVOS2Q6IE36 1432 aa13.67□□□□□ -0.22
SSH1-205ENST00000546812 PROM2Q8N271 834 aa13.67□□□□□ -0.22
SSH1-205ENST00000546812 ABTB2Q8N961 1025 aa13.67□□□□□ -0.22
SSH1-205ENST00000546812 SYT17Q9BSW7 474 aa13.67□□□□□ -0.22
SSH1-205ENST00000546812 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
SSH1-205ENST00000546812 FHDC1Q9C0D6 1143 aaPredicted RBP13.66□□□□□ -0.22
SSH1-205ENST00000546812 POLR3AO14802 1390 aaPredicted RBP13.66□□□□□ -0.22
SSH1-205ENST00000546812 USP19O94966 1318 aa13.65□□□□□ -0.22
SSH1-205ENST00000546812 ACEP12821 1306 aa13.65□□□□□ -0.22
SSH1-205ENST00000546812 CEP350Q5VT06 3117 aa13.65□□□□□ -0.22
SSH1-205ENST00000546812 GCP02774 474 aa13.65□□□□□ -0.22
SSH1-205ENST00000546812 DDB1Q16531 1140 aa13.65□□□□□ -0.22
SSH1-205ENST00000546812 PTF1AQ7RTS3 328 aa13.65□□□□□ -0.22
SSH1-205ENST00000546812 CDK19Q9BWU1 502 aa13.65□□□□□ -0.22
SSH1-205ENST00000546812 CCDC61Q9Y6R9 512 aa13.65□□□□□ -0.22
SSH1-205ENST00000546812 NRKQ7Z2Y5 1582 aa13.64□□□□□ -0.23
SSH1-205ENST00000546812 PLEKHG3A1L390 1219 aa13.64□□□□□ -0.23
SSH1-205ENST00000546812 NLRP13Q86W25 1043 aa13.63□□□□□ -0.23
SSH1-205ENST00000546812 STK32BQ9NY57 414 aa13.63□□□□□ -0.23
SSH1-205ENST00000546812 PHRF1Q9P1Y6 1649 aaKnown RBP13.63□□□□□ -0.23
SSH1-205ENST00000546812 CRB1P82279 1406 aa13.63□□□□□ -0.23
SSH1-205ENST00000546812 COL5A2P05997 1499 aaPredicted RBP13.62□□□□□ -0.23
SSH1-205ENST00000546812 SLC15A2Q16348 729 aa13.62□□□□□ -0.23
SSH1-205ENST00000546812 SGIP1Q9BQI5 828 aa13.62□□□□□ -0.23
SSH1-205ENST00000546812 MTFR1LQ9H019 292 aa13.62□□□□□ -0.23
SSH1-205ENST00000546812 KDM2AQ9Y2K7 1162 aa13.62□□□□□ -0.23
SSH1-205ENST00000546812 CASZ1Q86V15 1759 aa13.61□□□□□ -0.23
SSH1-205ENST00000546812 TXNRD1Q16881 649 aa13.61□□□□□ -0.23
SSH1-205ENST00000546812 MARCH10Q8NA82 808 aaPredicted RBP13.61□□□□□ -0.23
SSH1-205ENST00000546812 DCAF11Q8TEB1 546 aa13.61□□□□□ -0.23
SSH1-205ENST00000546812 STAC3Q96MF2 364 aa13.61□□□□□ -0.23
SSH1-205ENST00000546812 LMO7Q8WWI1 1683 aa13.6□□□□□ -0.23
SSH1-205ENST00000546812 BCL9O00512 1426 aa13.6□□□□□ -0.23
SSH1-205ENST00000546812 PARP4Q9UKK3 1724 aaKnown RBP13.6□□□□□ -0.23
SSH1-205ENST00000546812 AATKQ6ZMQ8 1374 aa13.59□□□□□ -0.23
SSH1-205ENST00000546812 PEAK1Q9H792 1746 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms