RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 ST20-MTHFSA0A0A6YYL1 179 aa9.69□□□□□ -0.86
SPPL3-209ENST00000545209 UPF1Q92900 1129 aaKnown RBP eCLIP9.69□□□□□ -0.86
SPPL3-209ENST00000545209 WDR70Q9NW82 654 aa9.69□□□□□ -0.86
SPPL3-209ENST00000545209 UGGT1Q9NYU2 1555 aa9.68□□□□□ -0.86
SPPL3-209ENST00000545209 ADGRB3O60242 1522 aa9.68□□□□□ -0.86
SPPL3-209ENST00000545209 ARHGEF40Q8TER5 1519 aa9.68□□□□□ -0.86
SPPL3-209ENST00000545209 NOS1P29475 1434 aa9.68□□□□□ -0.86
SPPL3-209ENST00000545209 FAM205CA6NFA0 338 aa9.68□□□□□ -0.86
SPPL3-209ENST00000545209 NUDT7P0C024 238 aa9.68□□□□□ -0.86
SPPL3-209ENST00000545209 CAMK2BQ13554 666 aa9.68□□□□□ -0.86
SPPL3-209ENST00000545209 NBPF1Q3BBV0 1214 aa9.68□□□□□ -0.86
SPPL3-209ENST00000545209 POLR3GLQ9BT43 218 aa9.68□□□□□ -0.86
SPPL3-209ENST00000545209 EIF3AQ14152 1382 aaKnown RBP9.67□□□□□ -0.86
SPPL3-209ENST00000545209 ERBB3P21860 1342 aa9.67□□□□□ -0.86
SPPL3-209ENST00000545209 RPGRIP1LQ68CZ1 1315 aa9.67□□□□□ -0.86
SPPL3-209ENST00000545209 EMILIN3Q9NT22 766 aa9.67□□□□□ -0.86
SPPL3-209ENST00000545209 KIAA1210Q9ULL0 1709 aa9.67□□□□□ -0.86
SPPL3-209ENST00000545209 KDM4FA0A1W2PPD8 638 aa9.66□□□□□ -0.86
SPPL3-209ENST00000545209 SCAF11Q99590 1463 aaKnown RBP9.66□□□□□ -0.86
SPPL3-209ENST00000545209 HAP1P54257 671 aaPredicted RBP9.65□□□□□ -0.86
SPPL3-209ENST00000545209 HS3ST6Q96QI5 342 aa9.65□□□□□ -0.86
SPPL3-209ENST00000545209 SLC52A1Q9NWF4 448 aa9.65□□□□□ -0.86
SPPL3-209ENST00000545209 MROH2AA6NES4 1674 aa9.64□□□□□ -0.87
SPPL3-209ENST00000545209 POTEB3A0JP26 581 aa9.64□□□□□ -0.87
SPPL3-209ENST00000545209 SLC24A1O60721 1099 aa9.64□□□□□ -0.87
SPPL3-209ENST00000545209 TMF1P82094 1093 aa9.64□□□□□ -0.87
SPPL3-209ENST00000545209 POTEBQ6S5H4 581 aa9.64□□□□□ -0.87
SPPL3-209ENST00000545209 IFT172Q9UG01 1749 aa9.64□□□□□ -0.87
SPPL3-209ENST00000545209 NRXN1Q9ULB1 1477 aa9.64□□□□□ -0.87
SPPL3-209ENST00000545209 COL17A1Q9UMD9 1497 aaPredicted RBP9.64□□□□□ -0.87
SPPL3-209ENST00000545209 PIK3C2BO00750 1634 aa9.64□□□□□ -0.87
SPPL3-209ENST00000545209 SYNMO15061 1565 aa9.63□□□□□ -0.87
SPPL3-209ENST00000545209 MAP3K9P80192 1104 aa9.63□□□□□ -0.87
SPPL3-209ENST00000545209 E2F4Q16254 413 aa9.63□□□□□ -0.87
SPPL3-209ENST00000545209 CDCA8Q53HL2 280 aa9.63□□□□□ -0.87
SPPL3-209ENST00000545209 ESF1Q9H501 851 aaKnown RBP9.63□□□□□ -0.87
SPPL3-209ENST00000545209 IQGAP1P46940 1657 aa9.63□□□□□ -0.87
SPPL3-209ENST00000545209 SIGLEC1Q9BZZ2 1709 aa9.62□□□□□ -0.87
SPPL3-209ENST00000545209 PREX1Q8TCU6 1659 aa9.62□□□□□ -0.87
SPPL3-209ENST00000545209 VARS2Q5ST30 1063 aaKnown RBP9.62□□□□□ -0.87
SPPL3-209ENST00000545209 PRKRIP1Q9H875 184 aaPredicted RBP9.62□□□□□ -0.87
SPPL3-209ENST00000545209 PCDH10Q9P2E7 1040 aa9.62□□□□□ -0.87
SPPL3-209ENST00000545209 LHX6Q9UPM6 363 aa9.62□□□□□ -0.87
SPPL3-209ENST00000545209 CFAP65Q6ZU64 1925 aaKnown RBP9.62□□□□□ -0.87
SPPL3-209ENST00000545209 ADGRF5Q8IZF2 1346 aa9.61□□□□□ -0.87
SPPL3-209ENST00000545209 ERVK-7P63135 1459 aa9.61□□□□□ -0.87
SPPL3-209ENST00000545209 PPLO60437 1756 aa9.61□□□□□ -0.87
SPPL3-209ENST00000545209 CDAN1Q8IWY9 1227 aa9.61□□□□□ -0.87
SPPL3-209ENST00000545209 TESK2Q96S53 571 aa9.61□□□□□ -0.87
SPPL3-209ENST00000545209 KTN1Q86UP2 1357 aaKnown RBP9.61□□□□□ -0.87
SPPL3-209ENST00000545209 SETBP1Q9Y6X0 1596 aa9.6□□□□□ -0.87
SPPL3-209ENST00000545209 PIK3C2GO75747 1445 aa9.6□□□□□ -0.87
SPPL3-209ENST00000545209 CFAP70Q5T0N1 1121 aa9.6□□□□□ -0.87
SPPL3-209ENST00000545209 DPYSL4O14531 572 aa9.59□□□□□ -0.87
SPPL3-209ENST00000545209 EVI5O60447 810 aa9.59□□□□□ -0.87
SPPL3-209ENST00000545209 IDI1Q13907 227 aa9.59□□□□□ -0.87
SPPL3-209ENST00000545209 ANO8Q9HCE9 1232 aaPredicted RBP9.59□□□□□ -0.87
SPPL3-209ENST00000545209 DISP3Q9P2K9 1392 aa9.59□□□□□ -0.87
SPPL3-209ENST00000545209 CLTCQ00610 1675 aaKnown RBP9.58□□□□□ -0.88
SPPL3-209ENST00000545209 ZFYVE9O95405 1425 aa9.58□□□□□ -0.88
SPPL3-209ENST00000545209 NEXMIFQ5QGS0 1516 aa9.58□□□□□ -0.88
SPPL3-209ENST00000545209 MLECQ14165 292 aa9.58□□□□□ -0.88
SPPL3-209ENST00000545209 MRS2Q9HD23 443 aa9.58□□□□□ -0.88
SPPL3-209ENST00000545209 PSDA5PKW4 1024 aaPredicted RBP9.57□□□□□ -0.88
SPPL3-209ENST00000545209 RALBP1Q15311 655 aa9.57□□□□□ -0.88
SPPL3-209ENST00000545209 C14orf93Q9H972 538 aaKnown RBP9.57□□□□□ -0.88
SPPL3-209ENST00000545209 SPATA31D1Q6ZQQ2 1576 aa9.57□□□□□ -0.88
SPPL3-209ENST00000545209 TMEM131LA2VDJ0 1609 aa9.56□□□□□ -0.88
SPPL3-209ENST00000545209 SBNO2Q9Y2G9 1366 aa9.56□□□□□ -0.88
SPPL3-209ENST00000545209 FBXO31Q5XUX0 539 aaPredicted RBP9.56□□□□□ -0.88
SPPL3-209ENST00000545209 ZNF687Q8N1G0 1237 aa9.56□□□□□ -0.88
SPPL3-209ENST00000545209 ARIH1Q9Y4X5 557 aaPredicted RBP9.56□□□□□ -0.88
SPPL3-209ENST00000545209 GTF3C3Q9Y5Q9 886 aa9.55□□□□□ -0.88
SPPL3-209ENST00000545209 MYO3AQ8NEV4 1616 aa9.55□□□□□ -0.88
SPPL3-209ENST00000545209 CENPJQ9HC77 1338 aaPredicted RBP9.55□□□□□ -0.88
SPPL3-209ENST00000545209 ADGRB1O14514 1584 aa9.54□□□□□ -0.88
SPPL3-209ENST00000545209 MYBBP1AQ9BQG0 1328 aaKnown RBP9.54□□□□□ -0.88
SPPL3-209ENST00000545209 ZMYM3Q14202 1370 aa9.53□□□□□ -0.88
SPPL3-209ENST00000545209 KDM5AP29375 1690 aaKnown RBP9.53□□□□□ -0.88
SPPL3-209ENST00000545209 PANK3Q9H999 370 aa9.53□□□□□ -0.88
SPPL3-209ENST00000545209 BRD4O60885 1362 aaPredicted RBP9.52□□□□□ -0.88
SPPL3-209ENST00000545209 HNRNPUQ00839 825 aaKnown RBP eCLIP9.52□□□□□ -0.89
SPPL3-209ENST00000545209 CNGB1Q14028 1251 aaPredicted RBP9.52□□□□□ -0.89
SPPL3-209ENST00000545209 VSIG10Q8N0Z9 540 aa9.52□□□□□ -0.89
SPPL3-209ENST00000545209 TMC1Q8TDI8 760 aa9.52□□□□□ -0.89
SPPL3-209ENST00000545209 TRAK1Q9UPV9 953 aa9.52□□□□□ -0.89
SPPL3-209ENST00000545209 TNRQ92752 1358 aa9.51□□□□□ -0.89
SPPL3-209ENST00000545209 SPDYE16A6NNV3 312 aaPredicted RBP9.51□□□□□ -0.89
SPPL3-209ENST00000545209 HDGFP51858 240 aaKnown RBP9.51□□□□□ -0.89
SPPL3-209ENST00000545209 PPP4R3BQ5MIZ7 849 aa9.51□□□□□ -0.89
SPPL3-209ENST00000545209 NUTM2DQ5VT03 806 aaPredicted RBP9.51□□□□□ -0.89
SPPL3-209ENST00000545209 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.51□□□□□ -0.89
SPPL3-209ENST00000545209 KNSTRNQ9Y448 316 aa9.51□□□□□ -0.89
SPPL3-209ENST00000545209 A2ML1A8K2U0 1454 aa9.51□□□□□ -0.89
SPPL3-209ENST00000545209 MYO5BQ9ULV0 1848 aa9.51□□□□□ -0.89
SPPL3-209ENST00000545209 PARD3Q8TEW0 1356 aa9.5□□□□□ -0.89
SPPL3-209ENST00000545209 RIMS2Q9UQ26 1411 aa9.5□□□□□ -0.89
SPPL3-209ENST00000545209 PER1O15534 1290 aaPredicted RBP9.5□□□□□ -0.89
SPPL3-209ENST00000545209 FOSBP53539 338 aa9.5□□□□□ -0.89
SPPL3-209ENST00000545209 PDIA6Q15084 440 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms