RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 XRN1Q8IZH2 1706 aaKnown RBP13.57□□□□□ -0.24
CIT-216ENST00000544872 APLP1P51693 650 aa13.57□□□□□ -0.24
CIT-216ENST00000544872 LRPPRCP42704 1394 aaKnown RBP13.57□□□□□ -0.24
CIT-216ENST00000544872 CLTCL1P53675 1640 aa13.57□□□□□ -0.24
CIT-216ENST00000544872 SHANK3Q9BYB0 1731 aa13.56□□□□□ -0.24
CIT-216ENST00000544872 PXDNQ92626 1479 aa13.56□□□□□ -0.24
CIT-216ENST00000544872 CABLES1Q8TDN4 633 aa13.56□□□□□ -0.24
CIT-216ENST00000544872 TIMELESSQ9UNS1 1208 aa13.56□□□□□ -0.24
CIT-216ENST00000544872 ADGRF5Q8IZF2 1346 aa13.56□□□□□ -0.24
CIT-216ENST00000544872 PDGFDQ9GZP0 370 aaPredicted RBP13.55□□□□□ -0.24
CIT-216ENST00000544872 WWC3Q9ULE0 1092 aa13.55□□□□□ -0.24
CIT-216ENST00000544872 PLCH1Q4KWH8 1693 aa13.54□□□□□ -0.24
CIT-216ENST00000544872 NWD2Q9ULI1 1742 aa13.54□□□□□ -0.24
CIT-216ENST00000544872 ZNF526Q8TF50 670 aaPredicted RBP13.54□□□□□ -0.24
CIT-216ENST00000544872 L3MBTL2Q969R5 705 aa13.54□□□□□ -0.24
CIT-216ENST00000544872 C14orf93Q9H972 538 aaKnown RBP13.54□□□□□ -0.24
CIT-216ENST00000544872 METP08581 1390 aa13.54□□□□□ -0.24
CIT-216ENST00000544872 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
CIT-216ENST00000544872 BTG4Q9NY30 223 aa13.53□□□□□ -0.24
CIT-216ENST00000544872 STK26Q9P289 416 aa13.53□□□□□ -0.24
CIT-216ENST00000544872 ATP10DQ9P241 1426 aa13.53□□□□□ -0.24
CIT-216ENST00000544872 LMOD2Q6P5Q4 547 aa13.52□□□□□ -0.25
CIT-216ENST00000544872 ARXQ96QS3 562 aa13.52□□□□□ -0.25
CIT-216ENST00000544872 BCL11BQ9C0K0 894 aaPredicted RBP13.52□□□□□ -0.25
CIT-216ENST00000544872 SPATA31A3Q5VYP0 1347 aa13.52□□□□□ -0.25
CIT-216ENST00000544872 KIF1BO60333 1816 aa13.52□□□□□ -0.25
CIT-216ENST00000544872 CFAP70Q5T0N1 1121 aa13.51□□□□□ -0.25
CIT-216ENST00000544872 POGKQ9P215 609 aa13.51□□□□□ -0.25
CIT-216ENST00000544872 PDE3BQ13370 1112 aa13.5□□□□□ -0.25
CIT-216ENST00000544872 ANO8Q9HCE9 1232 aaPredicted RBP13.5□□□□□ -0.25
CIT-216ENST00000544872 NEXMIFQ5QGS0 1516 aa13.49□□□□□ -0.25
CIT-216ENST00000544872 SPATA31A5Q5VU36 1347 aa13.49□□□□□ -0.25
CIT-216ENST00000544872 SPATA31A7Q8IWB4 1347 aa13.49□□□□□ -0.25
CIT-216ENST00000544872 TMEM132EQ6IEE7 984 aa13.49□□□□□ -0.25
CIT-216ENST00000544872 DNAJC5GQ8N7S2 189 aa13.49□□□□□ -0.25
CIT-216ENST00000544872 NUTM2FA1L443 756 aa13.48□□□□□ -0.25
CIT-216ENST00000544872 MTFR1LQ9H019 292 aa13.48□□□□□ -0.25
CIT-216ENST00000544872 SIRT1Q96EB6 747 aa13.47□□□□□ -0.25
CIT-216ENST00000544872 CASZ1Q86V15 1759 aa13.47□□□□□ -0.25
CIT-216ENST00000544872 PIK3C2GO75747 1445 aa13.47□□□□□ -0.25
CIT-216ENST00000544872 KRT28Q7Z3Y7 464 aa13.46□□□□□ -0.25
CIT-216ENST00000544872 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
CIT-216ENST00000544872 STK32BQ9NY57 414 aa13.45□□□□□ -0.26
CIT-216ENST00000544872 TRAK1Q9UPV9 953 aa13.45□□□□□ -0.26
CIT-216ENST00000544872 ABCC11Q96J66 1382 aa13.45□□□□□ -0.26
CIT-216ENST00000544872 GRIN3BO60391 1043 aa13.44□□□□□ -0.26
CIT-216ENST00000544872 SLC24A1O60721 1099 aa13.44□□□□□ -0.26
CIT-216ENST00000544872 THSD7AQ9UPZ6 1657 aa13.43□□□□□ -0.26
CIT-216ENST00000544872 PSME1Q06323 249 aa13.42□□□□□ -0.26
CIT-216ENST00000544872 PRAM1Q96QH2 718 aa13.42□□□□□ -0.26
CIT-216ENST00000544872 CARD11Q9BXL7 1154 aa13.42□□□□□ -0.26
CIT-216ENST00000544872 ROCK2O75116 1388 aaKnown RBP13.42□□□□□ -0.26
CIT-216ENST00000544872 MAP3K5Q99683 1374 aa13.42□□□□□ -0.26
CIT-216ENST00000544872 YTHDC2Q9H6S0 1430 aaKnown RBP13.41□□□□□ -0.26
CIT-216ENST00000544872 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
CIT-216ENST00000544872 USP35Q9P2H5 1018 aa13.41□□□□□ -0.26
CIT-216ENST00000544872 ROBO2Q9HCK4 1378 aa13.41□□□□□ -0.26
CIT-216ENST00000544872 NRXN1Q9ULB1 1477 aa13.41□□□□□ -0.26
CIT-216ENST00000544872 NRXN3Q9Y4C0 1643 aa13.4□□□□□ -0.26
CIT-216ENST00000544872 WAPLQ7Z5K2 1190 aa13.4□□□□□ -0.26
CIT-216ENST00000544872 KLRG1Q96E93 195 aa13.4□□□□□ -0.26
CIT-216ENST00000544872 EIF3AQ14152 1382 aaKnown RBP13.4□□□□□ -0.26
CIT-216ENST00000544872 TNS3Q68CZ2 1445 aa13.39□□□□□ -0.27
CIT-216ENST00000544872 PRAG1Q86YV5 1406 aa13.39□□□□□ -0.27
CIT-216ENST00000544872 SAFB2Q14151 953 aaKnown RBP eCLIP13.39□□□□□ -0.27
CIT-216ENST00000544872 JMYQ8N9B5 988 aa13.39□□□□□ -0.27
CIT-216ENST00000544872 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
CIT-216ENST00000544872 FAM161AQ3B820 660 aa13.38□□□□□ -0.27
CIT-216ENST00000544872 NBPF1Q3BBV0 1214 aa13.38□□□□□ -0.27
CIT-216ENST00000544872 STRN4Q9NRL3 753 aa13.38□□□□□ -0.27
CIT-216ENST00000544872 SPATA31A1Q5TZJ5 1347 aa13.38□□□□□ -0.27
CIT-216ENST00000544872 PLSCR1O15162 318 aa13.37□□□□□ -0.27
CIT-216ENST00000544872 ARHGEF10O15013 1369 aa13.36□□□□□ -0.27
CIT-216ENST00000544872 SLC15A2Q16348 729 aa13.36□□□□□ -0.27
CIT-216ENST00000544872 PPLO60437 1756 aa13.35□□□□□ -0.27
CIT-216ENST00000544872 HTRA3P83110 453 aa13.35□□□□□ -0.27
CIT-216ENST00000544872 TECPR2O15040 1411 aa13.35□□□□□ -0.27
CIT-216ENST00000544872 CENPJQ9HC77 1338 aaPredicted RBP13.35□□□□□ -0.27
CIT-216ENST00000544872 KIF3CO14782 793 aa13.34□□□□□ -0.27
CIT-216ENST00000544872 YBX3P16989 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
CIT-216ENST00000544872 C11orf95C9JLR9 678 aaPredicted RBP13.33□□□□□ -0.28
CIT-216ENST00000544872 POLD1P28340 1107 aa13.33□□□□□ -0.28
CIT-216ENST00000544872 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.28
CIT-216ENST00000544872 MINK1Q8N4C8 1332 aaPredicted RBP13.33□□□□□ -0.28
CIT-216ENST00000544872 COL14A1Q05707 1796 aaKnown RBP13.32□□□□□ -0.28
CIT-216ENST00000544872 SRPK2P78362 688 aaKnown RBP13.32□□□□□ -0.28
CIT-216ENST00000544872 NLGN2Q8NFZ4 835 aa13.32□□□□□ -0.28
CIT-216ENST00000544872 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
CIT-216ENST00000544872 WASLO00401 505 aaPredicted RBP13.31□□□□□ -0.28
CIT-216ENST00000544872 HSPA1AP0DMV8 641 aaKnown RBP13.31□□□□□ -0.28
CIT-216ENST00000544872 HSPA1BP0DMV9 641 aaKnown RBP13.31□□□□□ -0.28
CIT-216ENST00000544872 HIRIP3Q9BW71 556 aaPredicted RBP13.31□□□□□ -0.28
CIT-216ENST00000544872 EVC2Q86UK5 1308 aa13.31□□□□□ -0.28
CIT-216ENST00000544872 ABCA3Q99758 1704 aa13.3□□□□□ -0.28
CIT-216ENST00000544872 GOLGB1Q14789 3259 aaKnown RBP13.3□□□□□ -0.28
CIT-216ENST00000544872 TOMM70O94826 608 aa13.3□□□□□ -0.28
CIT-216ENST00000544872 CDCA8Q53HL2 280 aa13.3□□□□□ -0.28
CIT-216ENST00000544872 TNS2Q63HR2 1409 aa13.3□□□□□ -0.28
CIT-216ENST00000544872 ZEB1P37275 1124 aaPredicted RBP13.29□□□□□ -0.28
CIT-216ENST00000544872 EVA1CP58658 441 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms