RNA–Protein interactions for RNA: ENST00000544679.1

NDUFA9-209, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 2

Gene NDUFA9, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-209ENST00000544679 PIK3C2GO75747 1445 aa13.16□□□□□ -0.3
NDUFA9-209ENST00000544679 MPHOSPH9Q99550 1183 aa13.16□□□□□ -0.3
NDUFA9-209ENST00000544679 SPON1Q9HCB6 807 aa13.16□□□□□ -0.3
NDUFA9-209ENST00000544679 FMN2Q9NZ56 1722 aa13.16□□□□□ -0.3
NDUFA9-209ENST00000544679 BRWD3Q6RI45 1802 aa13.16□□□□□ -0.3
NDUFA9-209ENST00000544679 DISP2A7MBM2 1401 aa13.15□□□□□ -0.3
NDUFA9-209ENST00000544679 CFAP70Q5T0N1 1121 aa13.15□□□□□ -0.3
NDUFA9-209ENST00000544679 ADGRB2O60241 1585 aa13.15□□□□□ -0.3
NDUFA9-209ENST00000544679 CAMKK2Q96RR4 588 aa13.14□□□□□ -0.31
NDUFA9-209ENST00000544679 USP35Q9P2H5 1018 aa13.14□□□□□ -0.31
NDUFA9-209ENST00000544679 PLCH1Q4KWH8 1693 aa13.14□□□□□ -0.31
NDUFA9-209ENST00000544679 SPATA31E1Q6ZUB1 1445 aa13.13□□□□□ -0.31
NDUFA9-209ENST00000544679 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
NDUFA9-209ENST00000544679 HIRIP3Q9BW71 556 aaPredicted RBP13.12□□□□□ -0.31
NDUFA9-209ENST00000544679 TRAK1Q9UPV9 953 aa13.12□□□□□ -0.31
NDUFA9-209ENST00000544679 RGPD1P0DJD0 1748 aa13.12□□□□□ -0.31
NDUFA9-209ENST00000544679 KNDC1Q76NI1 1749 aa13.12□□□□□ -0.31
NDUFA9-209ENST00000544679 MINK1Q8N4C8 1332 aaPredicted RBP13.12□□□□□ -0.31
NDUFA9-209ENST00000544679 EP400Q96L91 3159 aa13.12□□□□□ -0.31
NDUFA9-209ENST00000544679 COL14A1Q05707 1796 aaKnown RBP13.11□□□□□ -0.31
NDUFA9-209ENST00000544679 WASLO00401 505 aaPredicted RBP13.1□□□□□ -0.31
NDUFA9-209ENST00000544679 KCNQ2O43526 872 aa13.1□□□□□ -0.31
NDUFA9-209ENST00000544679 ZC3H6P61129 1189 aaKnown RBP13.09□□□□□ -0.31
NDUFA9-209ENST00000544679 CHRNA2Q15822 529 aa13.09□□□□□ -0.31
NDUFA9-209ENST00000544679 BARGINQ6ZT62 677 aa13.09□□□□□ -0.31
NDUFA9-209ENST00000544679 TCP11L2Q8N4U5 519 aa13.09□□□□□ -0.31
NDUFA9-209ENST00000544679 KIAA0232Q92628 1395 aa13.08□□□□□ -0.31
NDUFA9-209ENST00000544679 NINLQ9Y2I6 1382 aa13.08□□□□□ -0.31
NDUFA9-209ENST00000544679 THRAP3Q9Y2W1 955 aaKnown RBP13.08□□□□□ -0.32
NDUFA9-209ENST00000544679 STAC3Q96MF2 364 aa13.07□□□□□ -0.32
NDUFA9-209ENST00000544679 IFT172Q9UG01 1749 aa13.07□□□□□ -0.32
NDUFA9-209ENST00000544679 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
NDUFA9-209ENST00000544679 NUTM2GQ5VZR2 741 aa13.05□□□□□ -0.32
NDUFA9-209ENST00000544679 ABTB2Q8N961 1025 aa13.05□□□□□ -0.32
NDUFA9-209ENST00000544679 KDM2AQ9Y2K7 1162 aa13.05□□□□□ -0.32
NDUFA9-209ENST00000544679 NUDT16Q96DE0 195 aaKnown RBP13.04□□□□□ -0.32
NDUFA9-209ENST00000544679 NRAPQ86VF7 1730 aa13.03□□□□□ -0.32
NDUFA9-209ENST00000544679 NLRP13Q86W25 1043 aa13.03□□□□□ -0.32
NDUFA9-209ENST00000544679 BCL11BQ9C0K0 894 aaPredicted RBP13.03□□□□□ -0.32
NDUFA9-209ENST00000544679 TULP4Q9NRJ4 1543 aa13.03□□□□□ -0.32
NDUFA9-209ENST00000544679 ABCA3Q99758 1704 aa13.02□□□□□ -0.32
NDUFA9-209ENST00000544679 ZBTB7CA1YPR0 619 aa13.02□□□□□ -0.33
NDUFA9-209ENST00000544679 LARP1Q6PKG0 1096 aaKnown RBP13.02□□□□□ -0.33
NDUFA9-209ENST00000544679 DCAF11Q8TEB1 546 aa13.02□□□□□ -0.33
NDUFA9-209ENST00000544679 PRR36Q9H6K5 1346 aa13.02□□□□□ -0.33
NDUFA9-209ENST00000544679 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.33
NDUFA9-209ENST00000544679 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
NDUFA9-209ENST00000544679 SSH2Q76I76 1423 aa13.01□□□□□ -0.33
NDUFA9-209ENST00000544679 ATP7BP35670 1465 aa13.01□□□□□ -0.33
NDUFA9-209ENST00000544679 THSD7AQ9UPZ6 1657 aa13.01□□□□□ -0.33
NDUFA9-209ENST00000544679 PLSCR1O15162 318 aa13□□□□□ -0.33
NDUFA9-209ENST00000544679 DDB1Q16531 1140 aa13□□□□□ -0.33
NDUFA9-209ENST00000544679 CDK19Q9BWU1 502 aa13□□□□□ -0.33
NDUFA9-209ENST00000544679 STK32BQ9NY57 414 aa12.99□□□□□ -0.33
NDUFA9-209ENST00000544679 OVOS2A0A0G2JMS6 1433 aa12.98□□□□□ -0.33
NDUFA9-209ENST00000544679 OVOS2A0A0J9YW53 1432 aa12.98□□□□□ -0.33
NDUFA9-209ENST00000544679 OVOS2Q6IE36 1432 aa12.98□□□□□ -0.33
NDUFA9-209ENST00000544679 ACEP12821 1306 aa12.98□□□□□ -0.33
NDUFA9-209ENST00000544679 SENP3-EIF4A1A0A087X0R7 540 aa12.98□□□□□ -0.33
NDUFA9-209ENST00000544679 TOM1L2Q6ZVM7 507 aa12.98□□□□□ -0.33
NDUFA9-209ENST00000544679 CDCA7Q9BWT1 371 aaPredicted RBP12.98□□□□□ -0.33
NDUFA9-209ENST00000544679 TNS1Q9HBL0 1735 aaKnown RBP12.98□□□□□ -0.33
NDUFA9-209ENST00000544679 CPDO75976 1380 aa12.97□□□□□ -0.33
NDUFA9-209ENST00000544679 TRPM3Q9HCF6 1732 aaPredicted RBP12.97□□□□□ -0.33
NDUFA9-209ENST00000544679 ALS2Q96Q42 1657 aa12.97□□□□□ -0.33
NDUFA9-209ENST00000544679 GCP02774 474 aa12.97□□□□□ -0.33
NDUFA9-209ENST00000544679 ZBTB7AO95365 584 aa12.96□□□□□ -0.33
NDUFA9-209ENST00000544679 SRPK2P78362 688 aaKnown RBP12.96□□□□□ -0.33
NDUFA9-209ENST00000544679 ZNF784Q8NCA9 323 aaPredicted RBP12.96□□□□□ -0.33
NDUFA9-209ENST00000544679 PLEKHG3A1L390 1219 aa12.95□□□□□ -0.34
NDUFA9-209ENST00000544679 CSB-PGBD3P0DP91 1061 aa12.94□□□□□ -0.34
NDUFA9-209ENST00000544679 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
NDUFA9-209ENST00000544679 CRB1P82279 1406 aa12.94□□□□□ -0.34
NDUFA9-209ENST00000544679 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
NDUFA9-209ENST00000544679 NLRP6P59044 892 aa12.93□□□□□ -0.34
NDUFA9-209ENST00000544679 BRD4O60885 1362 aaPredicted RBP12.93□□□□□ -0.34
NDUFA9-209ENST00000544679 EXOC5O00471 708 aa12.92□□□□□ -0.34
NDUFA9-209ENST00000544679 ADGRB1O14514 1584 aa12.92□□□□□ -0.34
NDUFA9-209ENST00000544679 MTFR1LQ9H019 292 aa12.92□□□□□ -0.34
NDUFA9-209ENST00000544679 USP19O94966 1318 aa12.91□□□□□ -0.34
NDUFA9-209ENST00000544679 C1QTNF8P60827 252 aa12.91□□□□□ -0.34
NDUFA9-209ENST00000544679 GPR162Q16538 588 aa12.91□□□□□ -0.34
NDUFA9-209ENST00000544679 SYT17Q9BSW7 474 aa12.91□□□□□ -0.34
NDUFA9-209ENST00000544679 FHDC1Q9C0D6 1143 aaPredicted RBP12.91□□□□□ -0.34
NDUFA9-209ENST00000544679 CAMTA1Q9Y6Y1 1673 aa12.9□□□□□ -0.34
NDUFA9-209ENST00000544679 SLC15A2Q16348 729 aa12.9□□□□□ -0.34
NDUFA9-209ENST00000544679 ITSN1Q15811 1721 aa12.9□□□□□ -0.34
NDUFA9-209ENST00000544679 RREB1Q92766 1687 aa12.89□□□□□ -0.35
NDUFA9-209ENST00000544679 NUP188Q5SRE5 1749 aa12.89□□□□□ -0.35
NDUFA9-209ENST00000544679 TXNRD1Q16881 649 aa12.89□□□□□ -0.35
NDUFA9-209ENST00000544679 KCNH5Q8NCM2 988 aa12.89□□□□□ -0.35
NDUFA9-209ENST00000544679 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
NDUFA9-209ENST00000544679 AATKQ6ZMQ8 1374 aa12.89□□□□□ -0.35
NDUFA9-209ENST00000544679 COL5A2P05997 1499 aaPredicted RBP12.89□□□□□ -0.35
NDUFA9-209ENST00000544679 GIGYF1O75420 1035 aaPredicted RBP12.88□□□□□ -0.35
NDUFA9-209ENST00000544679 ARXQ96QS3 562 aa12.88□□□□□ -0.35
NDUFA9-209ENST00000544679 PHRF1Q9P1Y6 1649 aaKnown RBP12.88□□□□□ -0.35
NDUFA9-209ENST00000544679 WDR17Q8IZU2 1322 aa12.88□□□□□ -0.35
NDUFA9-209ENST00000544679 POLD1P28340 1107 aa12.87□□□□□ -0.35
NDUFA9-209ENST00000544679 PTGER2P43116 358 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms