RNA–Protein interactions for RNA: ENST00000544032.5

DDX47-209, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-209ENST00000544032 USP17L8P0C7I0 530 aa12.64□□□□□ -0.39
DDX47-209ENST00000544032 HDLBPQ00341 1268 aaKnown RBP12.64□□□□□ -0.39
DDX47-209ENST00000544032 ARMC5Q96C12 935 aa12.64□□□□□ -0.39
DDX47-209ENST00000544032 LAS1LQ9Y4W2 734 aaKnown RBP12.64□□□□□ -0.39
DDX47-209ENST00000544032 ERBB3P21860 1342 aa12.63□□□□□ -0.39
DDX47-209ENST00000544032 VAC14Q08AM6 782 aa12.63□□□□□ -0.39
DDX47-209ENST00000544032 CCDC144BQ3MJ40 725 aa12.63□□□□□ -0.39
DDX47-209ENST00000544032 ARSIQ5FYB1 569 aa12.63□□□□□ -0.39
DDX47-209ENST00000544032 STK32AQ8WU08 396 aa12.63□□□□□ -0.39
DDX47-209ENST00000544032 PKNOX2Q96KN3 472 aa12.63□□□□□ -0.39
DDX47-209ENST00000544032 GJD4Q96KN9 370 aaPredicted RBP12.63□□□□□ -0.39
DDX47-209ENST00000544032 PRDM10Q9NQV6 1147 aa12.63□□□□□ -0.39
DDX47-209ENST00000544032 TERF2IPQ9NYB0 399 aa12.63□□□□□ -0.39
DDX47-209ENST00000544032 SCAMP3O14828 347 aaKnown RBP12.62□□□□□ -0.39
DDX47-209ENST00000544032 SERPINB4P48594 390 aa12.62□□□□□ -0.39
DDX47-209ENST00000544032 TAGLNQ01995 201 aaKnown RBP12.62□□□□□ -0.39
DDX47-209ENST00000544032 AP1G2O75843 785 aa12.61□□□□□ -0.39
DDX47-209ENST00000544032 DSG2Q14126 1118 aa12.61□□□□□ -0.39
DDX47-209ENST00000544032 SGSM3Q96HU1 749 aa12.61□□□□□ -0.39
DDX47-209ENST00000544032 NAP1L5Q96NT1 182 aaPredicted RBP12.61□□□□□ -0.39
DDX47-209ENST00000544032 TINF2Q9BSI4 451 aa12.61□□□□□ -0.39
DDX47-209ENST00000544032 NOP58Q9Y2X3 529 aaKnown RBP12.61□□□□□ -0.39
DDX47-209ENST00000544032 SOX11P35716 441 aa12.6□□□□□ -0.39
DDX47-209ENST00000544032 PTGER2P43116 358 aa12.6□□□□□ -0.39
DDX47-209ENST00000544032 FAM50AQ14320 339 aaKnown RBP12.6□□□□□ -0.39
DDX47-209ENST00000544032 RIC3Q7Z5B4 369 aa12.6□□□□□ -0.39
DDX47-209ENST00000544032 NLGN1Q8N2Q7 840 aa12.6□□□□□ -0.39
DDX47-209ENST00000544032 TMTC2Q8N394 836 aa12.6□□□□□ -0.39
DDX47-209ENST00000544032 DHX38Q92620 1227 aaKnown RBP12.6□□□□□ -0.39
DDX47-209ENST00000544032 KRTAP3-3Q9BYR6 98 aa12.6□□□□□ -0.39
DDX47-209ENST00000544032 KRTAP3-2Q9BYR7 98 aa12.6□□□□□ -0.39
DDX47-209ENST00000544032 PRKAG2Q9UGJ0 569 aa12.6□□□□□ -0.39
DDX47-209ENST00000544032 FAN1Q9Y2M0 1017 aa12.6□□□□□ -0.39
DDX47-209ENST00000544032 FOXK1P85037 733 aa12.59□□□□□ -0.39
DDX47-209ENST00000544032 RAD51AP2Q09MP3 1159 aa12.59□□□□□ -0.39
DDX47-209ENST00000544032 GPATCH11Q8N954 259 aa12.59□□□□□ -0.39
DDX47-209ENST00000544032 ZCRB1Q8TBF4 217 aaKnown RBP12.59□□□□□ -0.39
DDX47-209ENST00000544032 CHPF2Q9P2E5 772 aa12.59□□□□□ -0.39
DDX47-209ENST00000544032 CREB3O43889 395 aa12.58□□□□□ -0.4
DDX47-209ENST00000544032 GPR37L1O60883 481 aa12.58□□□□□ -0.4
DDX47-209ENST00000544032 ATP2B1P20020 1258 aa12.58□□□□□ -0.4
DDX47-209ENST00000544032 SLC43A3Q8NBI5 491 aa12.58□□□□□ -0.4
DDX47-209ENST00000544032 VARS2Q5ST30 1063 aaKnown RBP12.57□□□□□ -0.4
DDX47-209ENST00000544032 BACH2Q9BYV9 841 aa12.57□□□□□ -0.4
DDX47-209ENST00000544032 NLRP2Q9NX02 1062 aa12.57□□□□□ -0.4
DDX47-209ENST00000544032 PRIM1P49642 420 aaKnown RBP12.56□□□□□ -0.4
DDX47-209ENST00000544032 SPNS2Q8IVW8 549 aa12.56□□□□□ -0.4
DDX47-209ENST00000544032 PRR7Q8TB68 274 aa12.56□□□□□ -0.4
DDX47-209ENST00000544032 KHSRPQ92945 711 aaKnown RBP eCLIP12.56□□□□□ -0.4
DDX47-209ENST00000544032 PIF1Q9H611 641 aa12.56□□□□□ -0.4
DDX47-209ENST00000544032 NOVA2Q9UNW9 492 aaKnown RBP12.56□□□□□ -0.4
DDX47-209ENST00000544032 U2SURPO15042 1029 aaKnown RBP12.55□□□□□ -0.4
DDX47-209ENST00000544032 ATP9BO43861 1147 aa12.55□□□□□ -0.4
DDX47-209ENST00000544032 PCDHGA4Q9Y5G9 962 aa12.55□□□□□ -0.4
DDX47-209ENST00000544032 PPFIA4O75335 1185 aa12.54□□□□□ -0.4
DDX47-209ENST00000544032 COL19A1Q14993 1142 aa12.54□□□□□ -0.4
DDX47-209ENST00000544032 KANK4Q5T7N3 995 aaPredicted RBP12.54□□□□□ -0.4
DDX47-209ENST00000544032 TBC1D9Q6ZT07 1266 aa12.54□□□□□ -0.4
DDX47-209ENST00000544032 NME8Q8N427 588 aa12.54□□□□□ -0.4
DDX47-209ENST00000544032 PMM1Q92871 262 aa12.54□□□□□ -0.4
DDX47-209ENST00000544032 SPTLC1O15269 473 aa12.53□□□□□ -0.4
DDX47-209ENST00000544032 LZTS3O60299 673 aaPredicted RBP12.53□□□□□ -0.4
DDX47-209ENST00000544032 GTF2F1P35269 517 aaKnown RBP eCLIP12.53□□□□□ -0.4
DDX47-209ENST00000544032 MAP3K9P80192 1104 aa12.53□□□□□ -0.4
DDX47-209ENST00000544032 MRPL58Q14197 206 aaKnown RBP12.53□□□□□ -0.4
DDX47-209ENST00000544032 TCEAL1Q15170 157 aa12.53□□□□□ -0.4
DDX47-209ENST00000544032 C9orf131Q5VYM1 1079 aa12.53□□□□□ -0.4
DDX47-209ENST00000544032 ZNF687Q8N1G0 1237 aa12.53□□□□□ -0.4
DDX47-209ENST00000544032 LONRF3Q496Y0 759 aa12.52□□□□□ -0.41
DDX47-209ENST00000544032 PLPP6Q8IY26 295 aa12.52□□□□□ -0.41
DDX47-209ENST00000544032 PTCD2Q8WV60 388 aaKnown RBP12.52□□□□□ -0.41
DDX47-209ENST00000544032 DDX12PQ92771 950 aa12.52□□□□□ -0.41
DDX47-209ENST00000544032 IQSEC3Q9UPP2 1182 aaPredicted RBP12.52□□□□□ -0.41
DDX47-209ENST00000544032 FOXD4L6Q3SYB3 417 aaPredicted RBP12.51□□□□□ -0.41
DDX47-209ENST00000544032 RNF187Q5TA31 235 aaPredicted RBP12.51□□□□□ -0.41
DDX47-209ENST00000544032 FOXD4L3Q6VB84 417 aaPredicted RBP12.51□□□□□ -0.41
DDX47-209ENST00000544032 SLAIN2Q9P270 581 aa12.51□□□□□ -0.41
DDX47-209ENST00000544032 ZEB1P37275 1124 aaPredicted RBP12.5□□□□□ -0.41
DDX47-209ENST00000544032 CLP1Q92989 425 aaKnown RBP12.5□□□□□ -0.41
DDX47-209ENST00000544032 ASB16Q96NS5 453 aa12.5□□□□□ -0.41
DDX47-209ENST00000544032 LILRB3O75022 631 aa12.49□□□□□ -0.41
DDX47-209ENST00000544032 NUDT7P0C024 238 aa12.49□□□□□ -0.41
DDX47-209ENST00000544032 CCAR1Q8IX12 1150 aaKnown RBP12.49□□□□□ -0.41
DDX47-209ENST00000544032 EVI5LQ96CN4 794 aa12.49□□□□□ -0.41
DDX47-209ENST00000544032 SPOCK3Q9BQ16 436 aa12.49□□□□□ -0.41
DDX47-209ENST00000544032 KDM4FA0A1W2PPD8 638 aa12.48□□□□□ -0.41
DDX47-209ENST00000544032 APLP1P51693 650 aa12.48□□□□□ -0.41
DDX47-209ENST00000544032 MMRN1Q13201 1228 aa12.48□□□□□ -0.41
DDX47-209ENST00000544032 RSBN1LQ6PCB5 846 aaPredicted RBP12.48□□□□□ -0.41
DDX47-209ENST00000544032 ZSWIM4Q9H7M6 989 aa12.48□□□□□ -0.41
DDX47-209ENST00000544032 COL4A3BPQ9Y5P4 624 aa12.48□□□□□ -0.41
DDX47-209ENST00000544032 QPCTQ16769 361 aa12.47□□□□□ -0.41
DDX47-209ENST00000544032 PLEKHG6Q3KR16 790 aa12.47□□□□□ -0.41
DDX47-209ENST00000544032 SPIRE2Q8WWL2 714 aa12.47□□□□□ -0.41
DDX47-209ENST00000544032 HSD3B2P26439 372 aa12.46□□□□□ -0.41
DDX47-209ENST00000544032 SEMA3FQ13275 785 aa12.46□□□□□ -0.41
DDX47-209ENST00000544032 RTL5Q5HYW3 569 aaPredicted RBP12.46□□□□□ -0.41
DDX47-209ENST00000544032 ZNF746Q6NUN9 644 aaPredicted RBP12.46□□□□□ -0.41
DDX47-209ENST00000544032 METTL3Q86U44 580 aaKnown RBP12.46□□□□□ -0.41
DDX47-209ENST00000544032 JAZF1Q86VZ6 243 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms