RNA–Protein interactions for RNA: ENST00000541249.5

SCNN1A-216, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 432 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-216ENST00000541249 ABCC11Q96J66 1382 aa16.02■□□□□ 0.16
SCNN1A-216ENST00000541249 ZNF784Q8NCA9 323 aaPredicted RBP16.02■□□□□ 0.16
SCNN1A-216ENST00000541249 IFT172Q9UG01 1749 aa16.02■□□□□ 0.15
SCNN1A-216ENST00000541249 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.15
SCNN1A-216ENST00000541249 KCNQ2O43526 872 aa16.01■□□□□ 0.15
SCNN1A-216ENST00000541249 RRBP1Q9P2E9 1410 aaKnown RBP15.99■□□□□ 0.15
SCNN1A-216ENST00000541249 ADGRF5Q8IZF2 1346 aa15.98■□□□□ 0.15
SCNN1A-216ENST00000541249 TMEM132EQ6IEE7 984 aa15.97■□□□□ 0.15
SCNN1A-216ENST00000541249 C1QTNF8P60827 252 aa15.96■□□□□ 0.15
SCNN1A-216ENST00000541249 UTRNP46939 3433 aa15.96■□□□□ 0.15
SCNN1A-216ENST00000541249 TRPM3Q9HCF6 1732 aaPredicted RBP15.95■□□□□ 0.14
SCNN1A-216ENST00000541249 SPATA31A1Q5TZJ5 1347 aa15.94■□□□□ 0.14
SCNN1A-216ENST00000541249 YTHDC2Q9H6S0 1430 aaKnown RBP15.94■□□□□ 0.14
SCNN1A-216ENST00000541249 PMFBP1Q8TBY8 1022 aa15.94■□□□□ 0.14
SCNN1A-216ENST00000541249 ALS2Q96Q42 1657 aa15.94■□□□□ 0.14
SCNN1A-216ENST00000541249 SIRT1Q96EB6 747 aa15.93■□□□□ 0.14
SCNN1A-216ENST00000541249 PRDM11Q9NQV5 511 aa15.93■□□□□ 0.14
SCNN1A-216ENST00000541249 PDE3BQ13370 1112 aa15.91■□□□□ 0.14
SCNN1A-216ENST00000541249 CRYBG1Q9Y4K1 1723 aa15.91■□□□□ 0.14
SCNN1A-216ENST00000541249 ANKRD30BQ9BXX2 1392 aa15.9■□□□□ 0.14
SCNN1A-216ENST00000541249 NRKQ7Z2Y5 1582 aa15.9■□□□□ 0.14
SCNN1A-216ENST00000541249 CHD4Q14839 1912 aa15.9■□□□□ 0.14
SCNN1A-216ENST00000541249 GPRASP1Q5JY77 1395 aa15.89■□□□□ 0.13
SCNN1A-216ENST00000541249 PIK3C2GO75747 1445 aa15.89■□□□□ 0.13
SCNN1A-216ENST00000541249 ANKARQ7Z5J8 1434 aa15.89■□□□□ 0.13
SCNN1A-216ENST00000541249 STRN4Q9NRL3 753 aa15.89■□□□□ 0.13
SCNN1A-216ENST00000541249 CASZ1Q86V15 1759 aa15.87■□□□□ 0.13
SCNN1A-216ENST00000541249 RGL3Q3MIN7 710 aa15.87■□□□□ 0.13
SCNN1A-216ENST00000541249 BARGINQ6ZT62 677 aa15.87■□□□□ 0.13
SCNN1A-216ENST00000541249 USP35Q9P2H5 1018 aa15.87■□□□□ 0.13
SCNN1A-216ENST00000541249 ACIN1Q9UKV3 1341 aaKnown RBP15.87■□□□□ 0.13
SCNN1A-216ENST00000541249 KIAA0232Q92628 1395 aa15.87■□□□□ 0.13
SCNN1A-216ENST00000541249 SAFB2Q14151 953 aaKnown RBP eCLIP15.86■□□□□ 0.13
SCNN1A-216ENST00000541249 CHRNA2Q15822 529 aa15.86■□□□□ 0.13
SCNN1A-216ENST00000541249 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
SCNN1A-216ENST00000541249 MYOM1P52179 1685 aa15.86■□□□□ 0.13
SCNN1A-216ENST00000541249 PRAM1Q96QH2 718 aa15.85■□□□□ 0.13
SCNN1A-216ENST00000541249 SPATA31E1Q6ZUB1 1445 aa15.85■□□□□ 0.13
SCNN1A-216ENST00000541249 RGPD3A6NKT7 1758 aaPredicted RBP15.84■□□□□ 0.13
SCNN1A-216ENST00000541249 RGPD4Q7Z3J3 1758 aa15.84■□□□□ 0.13
SCNN1A-216ENST00000541249 PAK3O75914 559 aaPredicted RBP15.83■□□□□ 0.12
SCNN1A-216ENST00000541249 ZBTB7AO95365 584 aa15.83■□□□□ 0.12
SCNN1A-216ENST00000541249 PTGER2P43116 358 aa15.83■□□□□ 0.12
SCNN1A-216ENST00000541249 ANO8Q9HCE9 1232 aaPredicted RBP15.83■□□□□ 0.12
SCNN1A-216ENST00000541249 DHX57Q6P158 1386 aaKnown RBP15.83■□□□□ 0.12
SCNN1A-216ENST00000541249 SSH2Q76I76 1423 aa15.83■□□□□ 0.12
SCNN1A-216ENST00000541249 EVA1CP58658 441 aa15.82■□□□□ 0.12
SCNN1A-216ENST00000541249 PDGFDQ9GZP0 370 aaPredicted RBP15.82■□□□□ 0.12
SCNN1A-216ENST00000541249 CEP350Q5VT06 3117 aa15.82■□□□□ 0.12
SCNN1A-216ENST00000541249 C11orf95C9JLR9 678 aaPredicted RBP15.81■□□□□ 0.12
SCNN1A-216ENST00000541249 SYT17Q9BSW7 474 aa15.81■□□□□ 0.12
SCNN1A-216ENST00000541249 C14orf93Q9H972 538 aaKnown RBP15.81■□□□□ 0.12
SCNN1A-216ENST00000541249 PHRF1Q9P1Y6 1649 aaKnown RBP15.8■□□□□ 0.12
SCNN1A-216ENST00000541249 PLSCR1O15162 318 aa15.8■□□□□ 0.12
SCNN1A-216ENST00000541249 TCP11L2Q8N4U5 519 aa15.8■□□□□ 0.12
SCNN1A-216ENST00000541249 FHDC1Q9C0D6 1143 aaPredicted RBP15.8■□□□□ 0.12
SCNN1A-216ENST00000541249 POGKQ9P215 609 aa15.8■□□□□ 0.12
SCNN1A-216ENST00000541249 EIF3AQ14152 1382 aaKnown RBP15.79■□□□□ 0.12
SCNN1A-216ENST00000541249 GIGYF1O75420 1035 aaPredicted RBP15.79■□□□□ 0.12
SCNN1A-216ENST00000541249 ZC3H6P61129 1189 aaKnown RBP15.79■□□□□ 0.12
SCNN1A-216ENST00000541249 NGDNQ8NEJ9 315 aaKnown RBP15.79■□□□□ 0.12
SCNN1A-216ENST00000541249 ATF5Q9Y2D1 282 aaPredicted RBP15.79■□□□□ 0.12
SCNN1A-216ENST00000541249 PRR36Q9H6K5 1346 aa15.78■□□□□ 0.12
SCNN1A-216ENST00000541249 PARP4Q9UKK3 1724 aaKnown RBP15.78■□□□□ 0.12
SCNN1A-216ENST00000541249 LARP1Q6PKG0 1096 aaKnown RBP15.78■□□□□ 0.12
SCNN1A-216ENST00000541249 BCL11BQ9C0K0 894 aaPredicted RBP15.78■□□□□ 0.12
SCNN1A-216ENST00000541249 DLC1Q96QB1 1528 aa15.78■□□□□ 0.12
SCNN1A-216ENST00000541249 TULP4Q9NRJ4 1543 aa15.78■□□□□ 0.12
SCNN1A-216ENST00000541249 OVOS2A0A0G2JMS6 1433 aa15.77■□□□□ 0.12
SCNN1A-216ENST00000541249 OVOS2A0A0J9YW53 1432 aa15.77■□□□□ 0.12
SCNN1A-216ENST00000541249 OVOS2Q6IE36 1432 aa15.77■□□□□ 0.12
SCNN1A-216ENST00000541249 CFAP70Q5T0N1 1121 aa15.77■□□□□ 0.12
SCNN1A-216ENST00000541249 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.12
SCNN1A-216ENST00000541249 HIRIP3Q9BW71 556 aaPredicted RBP15.77■□□□□ 0.12
SCNN1A-216ENST00000541249 THRAP3Q9Y2W1 955 aaKnown RBP15.77■□□□□ 0.12
SCNN1A-216ENST00000541249 SBF2Q86WG5 1849 aa15.77■□□□□ 0.11
SCNN1A-216ENST00000541249 NPM3O75607 178 aaKnown RBP15.76■□□□□ 0.11
SCNN1A-216ENST00000541249 PEAK1Q9H792 1746 aa15.76■□□□□ 0.11
SCNN1A-216ENST00000541249 ATP7BP35670 1465 aa15.74■□□□□ 0.11
SCNN1A-216ENST00000541249 MINK1Q8N4C8 1332 aaPredicted RBP15.73■□□□□ 0.11
SCNN1A-216ENST00000541249 PROM2Q8N271 834 aa15.73■□□□□ 0.11
SCNN1A-216ENST00000541249 MTFR1LQ9H019 292 aa15.73■□□□□ 0.11
SCNN1A-216ENST00000541249 LMO7Q8WWI1 1683 aa15.73■□□□□ 0.11
SCNN1A-216ENST00000541249 WASLO00401 505 aaPredicted RBP15.72■□□□□ 0.11
SCNN1A-216ENST00000541249 NUTM2GQ5VZR2 741 aa15.72■□□□□ 0.11
SCNN1A-216ENST00000541249 SGIP1Q9BQI5 828 aa15.72■□□□□ 0.11
SCNN1A-216ENST00000541249 STK32BQ9NY57 414 aa15.72■□□□□ 0.11
SCNN1A-216ENST00000541249 MAPK8IP2Q13387 824 aaPredicted RBP15.71■□□□□ 0.11
SCNN1A-216ENST00000541249 ITSN1Q15811 1721 aa15.71■□□□□ 0.1
SCNN1A-216ENST00000541249 PTF1AQ7RTS3 328 aa15.7■□□□□ 0.1
SCNN1A-216ENST00000541249 CPDO75976 1380 aa15.7■□□□□ 0.1
SCNN1A-216ENST00000541249 MAP3K5Q99683 1374 aa15.7■□□□□ 0.1
SCNN1A-216ENST00000541249 SLC15A2Q16348 729 aa15.69■□□□□ 0.1
SCNN1A-216ENST00000541249 GPR162Q16538 588 aa15.69■□□□□ 0.1
SCNN1A-216ENST00000541249 ARXQ96QS3 562 aa15.69■□□□□ 0.1
SCNN1A-216ENST00000541249 TRAK1Q9UPV9 953 aa15.69■□□□□ 0.1
SCNN1A-216ENST00000541249 LRRC37A3O60309 1634 aa15.68■□□□□ 0.1
SCNN1A-216ENST00000541249 COL5A2P05997 1499 aaPredicted RBP15.68■□□□□ 0.1
SCNN1A-216ENST00000541249 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
SCNN1A-216ENST00000541249 DDB1Q16531 1140 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms