RNA–Protein interactions for RNA: ENST00000540706.5

SMG1P4-205, Transcript of SMG1 pseudogene 4, humanhuman

TSL 2

Gene SMG1P4, Length 2,543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-205ENST00000540706 USP17L19D6RCP7 530 aa8.89□□□□□ -0.99
SMG1P4-205ENST00000540706 USP17L20D6RJB6 530 aa8.89□□□□□ -0.99
SMG1P4-205ENST00000540706 USP17L24Q0WX57 530 aa8.89□□□□□ -0.99
SMG1P4-205ENST00000540706 ANO8Q9HCE9 1232 aaPredicted RBP8.89□□□□□ -0.99
SMG1P4-205ENST00000540706 BOLA1Q9Y3E2 137 aa8.89□□□□□ -0.99
SMG1P4-205ENST00000540706 PRMT3O60678 531 aa8.88□□□□□ -0.99
SMG1P4-205ENST00000540706 ATP2B4P23634 1241 aa8.88□□□□□ -0.99
SMG1P4-205ENST00000540706 ZNF594Q96JF6 807 aaPredicted RBP8.88□□□□□ -0.99
SMG1P4-205ENST00000540706 PAK3O75914 559 aaPredicted RBP8.88□□□□□ -0.99
SMG1P4-205ENST00000540706 PTK7Q13308 1070 aa8.88□□□□□ -0.99
SMG1P4-205ENST00000540706 TTC13Q8NBP0 860 aa8.88□□□□□ -0.99
SMG1P4-205ENST00000540706 RBM42Q9BTD8 480 aaKnown RBP8.88□□□□□ -0.99
SMG1P4-205ENST00000540706 PHF14O94880 888 aa8.87□□□□□ -0.99
SMG1P4-205ENST00000540706 TUSC1Q2TAM9 212 aa8.87□□□□□ -0.99
SMG1P4-205ENST00000540706 TSGA10IPQ3SY00 556 aa8.87□□□□□ -0.99
SMG1P4-205ENST00000540706 TANGO6Q9C0B7 1094 aa8.87□□□□□ -0.99
SMG1P4-205ENST00000540706 SMARCA4P51532 1647 aa8.87□□□□□ -0.99
SMG1P4-205ENST00000540706 FBXO45P0C2W1 286 aa8.87□□□□□ -0.99
SMG1P4-205ENST00000540706 CCDC144BQ3MJ40 725 aa8.87□□□□□ -0.99
SMG1P4-205ENST00000540706 SEPT3Q9UH03 358 aa8.87□□□□□ -0.99
SMG1P4-205ENST00000540706 LAMC3Q9Y6N6 1575 aa8.86□□□□□ -0.99
SMG1P4-205ENST00000540706 USP17L5A8MUK1 530 aa8.86□□□□□ -0.99
SMG1P4-205ENST00000540706 ELOAQ14241 798 aaKnown RBP8.86□□□□□ -0.99
SMG1P4-205ENST00000540706 NCOA4Q13772 614 aa8.86□□□□□ -0.99
SMG1P4-205ENST00000540706 DIXDC1Q155Q3 683 aa8.86□□□□□ -0.99
SMG1P4-205ENST00000540706 NT5DC4Q86YG4 428 aa8.86□□□□□ -0.99
SMG1P4-205ENST00000540706 PRIMPOLQ96LW4 560 aa8.86□□□□□ -0.99
SMG1P4-205ENST00000540706 SETDB2Q96T68 719 aa8.86□□□□□ -0.99
SMG1P4-205ENST00000540706 C6orf132Q5T0Z8 1188 aa8.85□□□□□ -0.99
SMG1P4-205ENST00000540706 METTL16Q86W50 562 aaKnown RBP8.85□□□□□ -0.99
SMG1P4-205ENST00000540706 TINF2Q9BSI4 451 aa8.85□□□□□ -0.99
SMG1P4-205ENST00000540706 MKRN1Q9UHC7 482 aaKnown RBP8.85□□□□□ -0.99
SMG1P4-205ENST00000540706 SUGT1Q9Y2Z0 365 aa8.85□□□□□ -0.99
SMG1P4-205ENST00000540706 SMAPO00193 183 aa8.85□□□□□ -0.99
SMG1P4-205ENST00000540706 LARGE2Q8N3Y3 721 aa8.85□□□□□ -0.99
SMG1P4-205ENST00000540706 PURBQ96QR8 312 aaKnown RBP8.85□□□□□ -0.99
SMG1P4-205ENST00000540706 KIAA1024Q9UPX6 916 aa8.85□□□□□ -0.99
SMG1P4-205ENST00000540706 PPME1Q9Y570 386 aa8.85□□□□□ -0.99
SMG1P4-205ENST00000540706 SKIP12755 728 aa8.84□□□□□ -0.99
SMG1P4-205ENST00000540706 MAPK1P28482 360 aa8.84□□□□□ -0.99
SMG1P4-205ENST00000540706 ZNF326Q5BKZ1 582 aaKnown RBP8.84□□□□□ -0.99
SMG1P4-205ENST00000540706 LOC102724159A0A0B4J2E5 919 aa8.84□□□□□ -0.99
SMG1P4-205ENST00000540706 HOXA2O43364 376 aa8.84□□□□□ -0.99
SMG1P4-205ENST00000540706 GTF2F1P35269 517 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMG1P4-205ENST00000540706 CLDN10P78369 228 aa8.84□□□□□ -0.99
SMG1P4-205ENST00000540706 PWP2Q15269 919 aaKnown RBP8.84□□□□□ -0.99
SMG1P4-205ENST00000540706 MKNK1Q9BUB5 465 aa8.84□□□□□ -0.99
SMG1P4-205ENST00000540706 ZBTB3Q9H5J0 574 aa8.84□□□□□ -0.99
SMG1P4-205ENST00000540706 FDX1P10109 184 aa8.83□□□□□ -1
SMG1P4-205ENST00000540706 VAMP1P23763 118 aa8.83□□□□□ -1
SMG1P4-205ENST00000540706 MRPL58Q14197 206 aaKnown RBP8.83□□□□□ -1
SMG1P4-205ENST00000540706 ERCC3P19447 782 aa8.83□□□□□ -1
SMG1P4-205ENST00000540706 RASA1P20936 1047 aa8.83□□□□□ -1
SMG1P4-205ENST00000540706 CDCA7LQ96GN5 454 aa8.83□□□□□ -1
SMG1P4-205ENST00000540706 EYA1Q99502 592 aa8.83□□□□□ -1
SMG1P4-205ENST00000540706 ACBD3Q9H3P7 528 aa8.83□□□□□ -1
SMG1P4-205ENST00000540706 ARHGAP4P98171 946 aa8.82□□□□□ -1
SMG1P4-205ENST00000540706 PTCD2Q8WV60 388 aaKnown RBP8.82□□□□□ -1
SMG1P4-205ENST00000540706 SPACA7Q96KW9 195 aa8.82□□□□□ -1
SMG1P4-205ENST00000540706 PRKAG2Q9UGJ0 569 aa8.82□□□□□ -1
SMG1P4-205ENST00000540706 ATAD2BQ9ULI0 1458 aa8.82□□□□□ -1
SMG1P4-205ENST00000540706 CD44P16070 742 aaKnown RBP8.82□□□□□ -1
SMG1P4-205ENST00000540706 DPYDQ12882 1025 aa8.82□□□□□ -1
SMG1P4-205ENST00000540706 TCEAL1Q15170 157 aa8.82□□□□□ -1
SMG1P4-205ENST00000540706 PMFBP1Q8TBY8 1022 aa8.82□□□□□ -1
SMG1P4-205ENST00000540706 PARNO95453 639 aaKnown RBP8.81□□□□□ -1
SMG1P4-205ENST00000540706 DMGDHQ9UI17 866 aaKnown RBP8.81□□□□□ -1
SMG1P4-205ENST00000540706 P4HBP07237 508 aaKnown RBP8.81□□□□□ -1
SMG1P4-205ENST00000540706 B4GALNT3Q6L9W6 998 aa8.81□□□□□ -1
SMG1P4-205ENST00000540706 CLP1Q92989 425 aaKnown RBP8.81□□□□□ -1
SMG1P4-205ENST00000540706 EGFLAMQ63HQ2 1017 aa8.8□□□□□ -1
SMG1P4-205ENST00000540706 FAM196BA6NMK8 535 aa8.8□□□□□ -1
SMG1P4-205ENST00000540706 SF3A1Q15459 793 aaKnown RBP8.8□□□□□ -1
SMG1P4-205ENST00000540706 JAZF1Q86VZ6 243 aa8.8□□□□□ -1
SMG1P4-205ENST00000540706 ADAM33Q9BZ11 813 aa8.8□□□□□ -1
SMG1P4-205ENST00000540706 TSKSQ9UJT2 592 aa8.8□□□□□ -1
SMG1P4-205ENST00000540706 RIPOR2Q9Y4F9 1068 aa8.8□□□□□ -1
SMG1P4-205ENST00000540706 MAP4K4O95819 1239 aaPredicted RBP8.79□□□□□ -1
SMG1P4-205ENST00000540706 OCLNQ16625 522 aa8.79□□□□□ -1
SMG1P4-205ENST00000540706 RBM27Q9P2N5 1060 aaKnown RBP8.79□□□□□ -1
SMG1P4-205ENST00000540706 PEX14O75381 377 aa8.79□□□□□ -1
SMG1P4-205ENST00000540706 CANXP27824 592 aaKnown RBP8.79□□□□□ -1
SMG1P4-205ENST00000540706 IRX5P78411 483 aaPredicted RBP8.79□□□□□ -1
SMG1P4-205ENST00000540706 DNMT3AQ9Y6K1 912 aaPredicted RBP8.79□□□□□ -1
SMG1P4-205ENST00000540706 NCLP19338 710 aaKnown RBP8.78□□□□□ -1
SMG1P4-205ENST00000540706 COL9A1P20849 921 aa8.78□□□□□ -1
SMG1P4-205ENST00000540706 RDH13Q8NBN7 331 aa8.78□□□□□ -1
SMG1P4-205ENST00000540706 TBX22Q9Y458 520 aa8.78□□□□□ -1
SMG1P4-205ENST00000540706 DNAJA1P31689 397 aaKnown RBP8.78□□□□□ -1
SMG1P4-205ENST00000540706 PRPF38BQ5VTL8 546 aaKnown RBP8.78□□□□□ -1
SMG1P4-205ENST00000540706 PSMD1Q99460 953 aa8.78□□□□□ -1
SMG1P4-205ENST00000540706 NUDT18Q6ZVK8 323 aa8.77□□□□□ -1.01
SMG1P4-205ENST00000540706 FAM200AQ8TCP9 573 aa8.77□□□□□ -1.01
SMG1P4-205ENST00000540706 EPAS1Q99814 870 aa8.77□□□□□ -1.01
SMG1P4-205ENST00000540706 TYW1BQ6NUM6 668 aa8.77□□□□□ -1.01
SMG1P4-205ENST00000540706 WWC3Q9ULE0 1092 aa8.77□□□□□ -1.01
SMG1P4-205ENST00000540706 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.77□□□□□ -1.01
SMG1P4-205ENST00000540706 GALR2O43603 387 aaPredicted RBP8.76□□□□□ -1.01
SMG1P4-205ENST00000540706 PRSS12P56730 875 aa8.76□□□□□ -1.01
SMG1P4-205ENST00000540706 CAPN10Q9HC96 672 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms