RNA–Protein interactions for RNA: ENST00000540706.5

SMG1P4-205, Transcript of SMG1 pseudogene 4, humanhuman

TSL 2

Gene SMG1P4, Length 2,543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-205ENST00000540706 CHIC1Q5VXU3 224 aa17.45■□□□□ 0.38
SMG1P4-205ENST00000540706 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
SMG1P4-205ENST00000540706 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
SMG1P4-205ENST00000540706 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
SMG1P4-205ENST00000540706 KCNA4P22459 653 aa14.55□□□□□ -0.08
SMG1P4-205ENST00000540706 PLPPR3Q6T4P5 718 aa14.55□□□□□ -0.08
SMG1P4-205ENST00000540706 SLC24A1O60721 1099 aa14.52□□□□□ -0.08
SMG1P4-205ENST00000540706 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
SMG1P4-205ENST00000540706 ADRA2BP18089 450 aa14.27□□□□□ -0.13
SMG1P4-205ENST00000540706 RTN4Q9NQC3 1192 aaKnown RBP14.04□□□□□ -0.16
SMG1P4-205ENST00000540706 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
SMG1P4-205ENST00000540706 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
SMG1P4-205ENST00000540706 SENP3Q9H4L4 574 aaPredicted RBP13.71□□□□□ -0.21
SMG1P4-205ENST00000540706 ZBTB22O15209 634 aa13.6□□□□□ -0.23
SMG1P4-205ENST00000540706 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
SMG1P4-205ENST00000540706 PPP4R3CPQ6ZMV5 832 aa13.17□□□□□ -0.3
SMG1P4-205ENST00000540706 NPM3O75607 178 aaKnown RBP13.14□□□□□ -0.31
SMG1P4-205ENST00000540706 PRKCSHP14314 528 aaPredicted RBP13.14□□□□□ -0.31
SMG1P4-205ENST00000540706 FOXD1Q16676 465 aa13.01□□□□□ -0.33
SMG1P4-205ENST00000540706 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
SMG1P4-205ENST00000540706 FKBP8Q14318 412 aa12.78□□□□□ -0.36
SMG1P4-205ENST00000540706 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
SMG1P4-205ENST00000540706 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
SMG1P4-205ENST00000540706 PLCB2Q00722 1185 aa12.54□□□□□ -0.4
SMG1P4-205ENST00000540706 PIAS4Q8N2W9 510 aaPredicted RBP12.46□□□□□ -0.42
SMG1P4-205ENST00000540706 TIMELESSQ9UNS1 1208 aa12.46□□□□□ -0.42
SMG1P4-205ENST00000540706 HAP1P54257 671 aaPredicted RBP12.44□□□□□ -0.42
SMG1P4-205ENST00000540706 TPRNQ4KMQ1 711 aa12.44□□□□□ -0.42
SMG1P4-205ENST00000540706 BCANQ96GW7 911 aa12.33□□□□□ -0.44
SMG1P4-205ENST00000540706 CNKSR2Q8WXI2 1034 aa12.32□□□□□ -0.44
SMG1P4-205ENST00000540706 TULP1O00294 542 aaPredicted RBP12.27□□□□□ -0.45
SMG1P4-205ENST00000540706 DAXXQ9UER7 740 aaPredicted RBP12.27□□□□□ -0.45
SMG1P4-205ENST00000540706 KDM2AQ9Y2K7 1162 aa12.24□□□□□ -0.45
SMG1P4-205ENST00000540706 FBLN2P98095 1184 aa12.22□□□□□ -0.45
SMG1P4-205ENST00000540706 SLC4A2P04920 1241 aa12.2□□□□□ -0.46
SMG1P4-205ENST00000540706 MAPK8IP2Q13387 824 aaPredicted RBP12.19□□□□□ -0.46
SMG1P4-205ENST00000540706 DCAF8L2P0C7V8 631 aa12.11□□□□□ -0.47
SMG1P4-205ENST00000540706 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
SMG1P4-205ENST00000540706 VSIG10Q8N0Z9 540 aa11.96□□□□□ -0.5
SMG1P4-205ENST00000540706 DNAJC5BQ9UF47 199 aa11.95□□□□□ -0.5
SMG1P4-205ENST00000540706 ARXQ96QS3 562 aa11.89□□□□□ -0.51
SMG1P4-205ENST00000540706 GTF3C3Q9Y5Q9 886 aa11.89□□□□□ -0.51
SMG1P4-205ENST00000540706 PKD2Q13563 968 aa11.87□□□□□ -0.51
SMG1P4-205ENST00000540706 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMG1P4-205ENST00000540706 IFNLR1Q8IU57 520 aaPredicted RBP11.8□□□□□ -0.52
SMG1P4-205ENST00000540706 ATXN8OSP0DMR3 200 aa11.78□□□□□ -0.52
SMG1P4-205ENST00000540706 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
SMG1P4-205ENST00000540706 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
SMG1P4-205ENST00000540706 CFAP44Q96MT7 982 aa11.77□□□□□ -0.53
SMG1P4-205ENST00000540706 RNF216Q9NWF9 866 aaPredicted RBP11.77□□□□□ -0.53
SMG1P4-205ENST00000540706 MYCNP04198 464 aaPredicted RBP11.76□□□□□ -0.53
SMG1P4-205ENST00000540706 SCAF1Q9H7N4 1312 aaKnown RBP11.74□□□□□ -0.53
SMG1P4-205ENST00000540706 TMEM132AQ24JP5 1023 aa11.65□□□□□ -0.54
SMG1P4-205ENST00000540706 VASPP50552 380 aaPredicted RBP11.64□□□□□ -0.55
SMG1P4-205ENST00000540706 HOMEZQ8IX15 550 aa11.62□□□□□ -0.55
SMG1P4-205ENST00000540706 SUPT5HO00267 1087 aaKnown RBP11.54□□□□□ -0.56
SMG1P4-205ENST00000540706 PODXL2Q9NZ53 605 aa11.52□□□□□ -0.57
SMG1P4-205ENST00000540706 C14orf37Q86TY3 774 aa11.51□□□□□ -0.57
SMG1P4-205ENST00000540706 BBXQ8WY36 941 aaPredicted RBP11.5□□□□□ -0.57
SMG1P4-205ENST00000540706 RGL2O15211 777 aa11.47□□□□□ -0.57
SMG1P4-205ENST00000540706 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.47□□□□□ -0.57
SMG1P4-205ENST00000540706 HOXD11P31277 338 aaPredicted RBP11.46□□□□□ -0.57
SMG1P4-205ENST00000540706 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
SMG1P4-205ENST00000540706 SPDYE4A6NLX3 237 aa11.43□□□□□ -0.58
SMG1P4-205ENST00000540706 KLHL34Q8N239 644 aa11.43□□□□□ -0.58
SMG1P4-205ENST00000540706 NBR1Q14596 966 aa11.4□□□□□ -0.58
SMG1P4-205ENST00000540706 TRHP20396 242 aaPredicted RBP11.4□□□□□ -0.59
SMG1P4-205ENST00000540706 MKRN4PQ13434 485 aaPredicted RBP11.38□□□□□ -0.59
SMG1P4-205ENST00000540706 SPRYD3Q8NCJ5 442 aa11.37□□□□□ -0.59
SMG1P4-205ENST00000540706 ECM2O94769 699 aaPredicted RBP11.36□□□□□ -0.59
SMG1P4-205ENST00000540706 UBTFP17480 764 aaKnown RBP11.36□□□□□ -0.59
SMG1P4-205ENST00000540706 PROM2Q8N271 834 aa11.35□□□□□ -0.59
SMG1P4-205ENST00000540706 NISCHQ9Y2I1 1504 aa11.34□□□□□ -0.59
SMG1P4-205ENST00000540706 TRIM26Q12899 539 aaPredicted RBP11.29□□□□□ -0.6
SMG1P4-205ENST00000540706 DNAJC5Q9H3Z4 198 aa11.29□□□□□ -0.6
SMG1P4-205ENST00000540706 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
SMG1P4-205ENST00000540706 DMRT2Q9Y5R5 561 aa11.25□□□□□ -0.61
SMG1P4-205ENST00000540706 HRCP23327 699 aa11.22□□□□□ -0.61
SMG1P4-205ENST00000540706 ZNF219Q9P2Y4 722 aaPredicted RBP11.17□□□□□ -0.62
SMG1P4-205ENST00000540706 RANGAP1P46060 587 aaPredicted RBP11.14□□□□□ -0.63
SMG1P4-205ENST00000540706 U3KPZ7 1027 aaPredicted RBP11.14□□□□□ -0.63
SMG1P4-205ENST00000540706 BRPF1P55201 1214 aaPredicted RBP11.11□□□□□ -0.63
SMG1P4-205ENST00000540706 NKX1-1Q15270 411 aaPredicted RBP11.09□□□□□ -0.63
SMG1P4-205ENST00000540706 NPM2Q86SE8 214 aaKnown RBP11.07□□□□□ -0.64
SMG1P4-205ENST00000540706 SPOCK2Q92563 424 aa11.06□□□□□ -0.64
SMG1P4-205ENST00000540706 ERICH6Q7L0X2 663 aa11.05□□□□□ -0.64
SMG1P4-205ENST00000540706 RNF25Q96BH1 459 aaPredicted RBP11□□□□□ -0.65
SMG1P4-205ENST00000540706 MSH5O43196 834 aa10.98□□□□□ -0.65
SMG1P4-205ENST00000540706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMG1P4-205ENST00000540706 ARID3AQ99856 593 aa10.96□□□□□ -0.65
SMG1P4-205ENST00000540706 SAMD1Q6SPF0 538 aaPredicted RBP10.95□□□□□ -0.66
SMG1P4-205ENST00000540706 DCAF8L1A6NGE4 600 aa10.95□□□□□ -0.66
SMG1P4-205ENST00000540706 C1orf115Q9H7X2 142 aa10.92□□□□□ -0.66
SMG1P4-205ENST00000540706 GTPBP6O43824 516 aaPredicted RBP10.91□□□□□ -0.66
SMG1P4-205ENST00000540706 CIZ1Q9ULV3 898 aaPredicted RBP10.9□□□□□ -0.66
SMG1P4-205ENST00000540706 LMOD2Q6P5Q4 547 aa10.89□□□□□ -0.67
SMG1P4-205ENST00000540706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMG1P4-205ENST00000540706 NEUROD2Q15784 382 aa10.87□□□□□ -0.67
SMG1P4-205ENST00000540706 HS6ST3Q8IZP7 471 aa10.85□□□□□ -0.67
SMG1P4-205ENST00000540706 TRIM41Q8WV44 630 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms