RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 NUCB1Q02818 461 aa12.9□□□□□ -0.34
GPD2-213ENST00000540309 IPO8O15397 1037 aaKnown RBP12.89□□□□□ -0.35
GPD2-213ENST00000540309 MSNP26038 577 aaKnown RBP12.89□□□□□ -0.35
GPD2-213ENST00000540309 NASPP49321 788 aaPredicted RBP12.89□□□□□ -0.35
GPD2-213ENST00000540309 CSPP1Q1MSJ5 1256 aa12.89□□□□□ -0.35
GPD2-213ENST00000540309 KIAA1211Q6ZU35 1233 aa12.89□□□□□ -0.35
GPD2-213ENST00000540309 MORC1Q86VD1 984 aa12.89□□□□□ -0.35
GPD2-213ENST00000540309 GAS2L3Q86XJ1 694 aa12.89□□□□□ -0.35
GPD2-213ENST00000540309 NOS1P29475 1434 aa12.88□□□□□ -0.35
GPD2-213ENST00000540309 K7ELQ4 463 aaPredicted RBP12.88□□□□□ -0.35
GPD2-213ENST00000540309 HSP90AB1P08238 724 aaKnown RBP12.88□□□□□ -0.35
GPD2-213ENST00000540309 ATF7IPQ6VMQ6 1270 aa12.88□□□□□ -0.35
GPD2-213ENST00000540309 ZBTB40Q9NUA8 1239 aa12.88□□□□□ -0.35
GPD2-213ENST00000540309 FANCAO15360 1455 aa12.87□□□□□ -0.35
GPD2-213ENST00000540309 PDLIM2Q96JY6 352 aa12.87□□□□□ -0.35
GPD2-213ENST00000540309 NOL7Q9UMY1 257 aaKnown RBP12.87□□□□□ -0.35
GPD2-213ENST00000540309 PPRC1Q5VV67 1664 aaKnown RBP12.87□□□□□ -0.35
GPD2-213ENST00000540309 NSD3Q9BZ95 1437 aa12.87□□□□□ -0.35
GPD2-213ENST00000540309 NUCB2P80303 420 aa12.87□□□□□ -0.35
GPD2-213ENST00000540309 ALDH1L2Q3SY69 923 aa12.87□□□□□ -0.35
GPD2-213ENST00000540309 GCC1Q96CN9 775 aa12.87□□□□□ -0.35
GPD2-213ENST00000540309 MED14O60244 1454 aa12.86□□□□□ -0.35
GPD2-213ENST00000540309 ZFYVE16Q7Z3T8 1539 aa12.86□□□□□ -0.35
GPD2-213ENST00000540309 EFCAB2Q5VUJ9 269 aa12.86□□□□□ -0.35
GPD2-213ENST00000540309 TRAPPC8Q9Y2L5 1435 aa12.86□□□□□ -0.35
GPD2-213ENST00000540309 TRIM27P14373 513 aa12.85□□□□□ -0.35
GPD2-213ENST00000540309 KIF2CQ99661 725 aa12.85□□□□□ -0.35
GPD2-213ENST00000540309 DYNC1I1O14576 645 aa12.84□□□□□ -0.35
GPD2-213ENST00000540309 PPIP5K1Q6PFW1 1433 aa12.84□□□□□ -0.35
GPD2-213ENST00000540309 KLHL34Q8N239 644 aa12.84□□□□□ -0.35
GPD2-213ENST00000540309 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
GPD2-213ENST00000540309 QRICH2Q9H0J4 1663 aa12.84□□□□□ -0.35
GPD2-213ENST00000540309 CWC22Q9HCG8 908 aaKnown RBP12.84□□□□□ -0.35
GPD2-213ENST00000540309 LMTK2Q8IWU2 1503 aa12.84□□□□□ -0.35
GPD2-213ENST00000540309 CHD1LQ86WJ1 897 aa12.83□□□□□ -0.35
GPD2-213ENST00000540309 PIK3R4Q99570 1358 aa12.83□□□□□ -0.36
GPD2-213ENST00000540309 ARHGAP45Q92619 1136 aa12.83□□□□□ -0.36
GPD2-213ENST00000540309 ARXQ96QS3 562 aa12.82□□□□□ -0.36
GPD2-213ENST00000540309 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
GPD2-213ENST00000540309 BAG4O95429 457 aaKnown RBP12.81□□□□□ -0.36
GPD2-213ENST00000540309 RABEP1Q15276 862 aa12.81□□□□□ -0.36
GPD2-213ENST00000540309 SMAP1Q8IYB5 467 aaPredicted RBP12.81□□□□□ -0.36
GPD2-213ENST00000540309 TNNQ9UQP3 1299 aa12.81□□□□□ -0.36
GPD2-213ENST00000540309 DDX49Q9Y6V7 483 aaKnown RBP12.81□□□□□ -0.36
GPD2-213ENST00000540309 ADGRB3O60242 1522 aa12.81□□□□□ -0.36
GPD2-213ENST00000540309 ANKRD26Q9UPS8 1709 aa12.81□□□□□ -0.36
GPD2-213ENST00000540309 ANKRD36BQ8N2N9 1353 aa12.8□□□□□ -0.36
GPD2-213ENST00000540309 EFCAB6Q5THR3 1501 aa12.8□□□□□ -0.36
GPD2-213ENST00000540309 CYP2E1P05181 493 aaPredicted RBP12.8□□□□□ -0.36
GPD2-213ENST00000540309 MTHFSP49914 203 aa12.8□□□□□ -0.36
GPD2-213ENST00000540309 RIPK4P57078 832 aa12.8□□□□□ -0.36
GPD2-213ENST00000540309 ITPRIPQ8IWB1 547 aa12.8□□□□□ -0.36
GPD2-213ENST00000540309 UHRF1BP1LA0JNW5 1464 aa12.8□□□□□ -0.36
GPD2-213ENST00000540309 KIF24Q5T7B8 1368 aa12.8□□□□□ -0.36
GPD2-213ENST00000540309 SSH1Q8WYL5 1049 aa12.8□□□□□ -0.36
GPD2-213ENST00000540309 ADGRB1O14514 1584 aa12.79□□□□□ -0.36
GPD2-213ENST00000540309 PPLO60437 1756 aa12.79□□□□□ -0.36
GPD2-213ENST00000540309 CFAP70Q5T0N1 1121 aa12.79□□□□□ -0.36
GPD2-213ENST00000540309 PLEKHF1Q96S99 279 aa12.79□□□□□ -0.36
GPD2-213ENST00000540309 ZKSCAN5Q9Y2L8 839 aa12.79□□□□□ -0.36
GPD2-213ENST00000540309 SPAG9O60271 1321 aaKnown RBP12.78□□□□□ -0.36
GPD2-213ENST00000540309 CDC42BPGQ6DT37 1551 aa12.78□□□□□ -0.36
GPD2-213ENST00000540309 NEUROD2Q15784 382 aa12.78□□□□□ -0.36
GPD2-213ENST00000540309 BCL2L13Q9BXK5 485 aa12.78□□□□□ -0.36
GPD2-213ENST00000540309 RPGRIP1LQ68CZ1 1315 aa12.78□□□□□ -0.36
GPD2-213ENST00000540309 ASXL2Q76L83 1435 aa12.78□□□□□ -0.36
GPD2-213ENST00000540309 CCDC39Q9UFE4 941 aa12.78□□□□□ -0.36
GPD2-213ENST00000540309 PRDM4Q9UKN5 801 aa12.78□□□□□ -0.36
GPD2-213ENST00000540309 RRP7AQ9Y3A4 280 aaKnown RBP12.78□□□□□ -0.36
GPD2-213ENST00000540309 MROH1Q8NDA8 1641 aa12.77□□□□□ -0.36
GPD2-213ENST00000540309 COL3A1P02461 1466 aaPredicted RBP12.77□□□□□ -0.36
GPD2-213ENST00000540309 CDC45O75419 566 aa12.77□□□□□ -0.37
GPD2-213ENST00000540309 TMPOP42166 694 aaKnown RBP12.77□□□□□ -0.37
GPD2-213ENST00000540309 EXOSC9Q06265 439 aaKnown RBP12.77□□□□□ -0.37
GPD2-213ENST00000540309 PTCH1Q13635 1447 aa12.77□□□□□ -0.37
GPD2-213ENST00000540309 CD109Q6YHK3 1445 aa12.77□□□□□ -0.37
GPD2-213ENST00000540309 ATP7AQ04656 1500 aa12.76□□□□□ -0.37
GPD2-213ENST00000540309 TMEM57Q8N5G2 664 aa12.76□□□□□ -0.37
GPD2-213ENST00000540309 C14orf93Q9H972 538 aaKnown RBP12.76□□□□□ -0.37
GPD2-213ENST00000540309 NOB1Q9ULX3 412 aaKnown RBP12.76□□□□□ -0.37
GPD2-213ENST00000540309 MROH2AA6NES4 1674 aa12.76□□□□□ -0.37
GPD2-213ENST00000540309 ZSCAN23Q3MJ62 389 aa12.76□□□□□ -0.37
GPD2-213ENST00000540309 UTP14CQ5TAP6 766 aaKnown RBP12.76□□□□□ -0.37
GPD2-213ENST00000540309 SASS6Q6UVJ0 657 aa12.76□□□□□ -0.37
GPD2-213ENST00000540309 LMBRD1Q9NUN5 540 aa12.76□□□□□ -0.37
GPD2-213ENST00000540309 ADGRF5Q8IZF2 1346 aa12.75□□□□□ -0.37
GPD2-213ENST00000540309 U2AF1L5P0DN76 240 aaPredicted RBP12.75□□□□□ -0.37
GPD2-213ENST00000540309 U2AF1Q01081 240 aaKnown RBP eCLIP12.75□□□□□ -0.37
GPD2-213ENST00000540309 TBC1D9Q6ZT07 1266 aa12.75□□□□□ -0.37
GPD2-213ENST00000540309 TRIM35Q9UPQ4 493 aa12.75□□□□□ -0.37
GPD2-213ENST00000540309 MBD3O95983 291 aa12.74□□□□□ -0.37
GPD2-213ENST00000540309 SSFA2P28290 1259 aa12.74□□□□□ -0.37
GPD2-213ENST00000540309 FBLN2P98095 1184 aa12.74□□□□□ -0.37
GPD2-213ENST00000540309 GAS2L2Q8NHY3 880 aa12.74□□□□□ -0.37
GPD2-213ENST00000540309 ZBTB7BO15156 539 aaPredicted RBP12.73□□□□□ -0.37
GPD2-213ENST00000540309 LRSAM1Q6UWE0 723 aa12.73□□□□□ -0.37
GPD2-213ENST00000540309 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
GPD2-213ENST00000540309 ZCCHC11Q5TAX3 1644 aaKnown RBP12.73□□□□□ -0.37
GPD2-213ENST00000540309 EVC2Q86UK5 1308 aa12.73□□□□□ -0.37
GPD2-213ENST00000540309 PNPLA6Q8IY17 1366 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms