RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 USP17L24Q0WX57 530 aa13.95□□□□□ -0.18
CD9-207ENST00000538418 KCNH8Q96L42 1107 aa13.95□□□□□ -0.18
CD9-207ENST00000538418 ZBED2Q9BTP6 218 aa13.95□□□□□ -0.18
CD9-207ENST00000538418 MRRFQ96E11 262 aaKnown RBP13.94□□□□□ -0.18
CD9-207ENST00000538418 CRTC2Q53ET0 693 aaPredicted RBP13.93□□□□□ -0.18
CD9-207ENST00000538418 LYPD8Q6UX82 237 aa13.93□□□□□ -0.18
CD9-207ENST00000538418 SLAIN2Q9P270 581 aa13.93□□□□□ -0.18
CD9-207ENST00000538418 MKRN1Q9UHC7 482 aaKnown RBP13.93□□□□□ -0.18
CD9-207ENST00000538418 SOWAHDA6NJG2 315 aa13.92□□□□□ -0.18
CD9-207ENST00000538418 KIAA1522Q9P206 1035 aaPredicted RBP13.92□□□□□ -0.18
CD9-207ENST00000538418 SEPT9Q9UHD8 586 aaPredicted RBP13.92□□□□□ -0.18
CD9-207ENST00000538418 LARP1Q6PKG0 1096 aaKnown RBP13.91□□□□□ -0.18
CD9-207ENST00000538418 DEPDC4Q8N2C3 294 aa13.91□□□□□ -0.18
CD9-207ENST00000538418 FAM174AQ8TBP5 190 aa13.91□□□□□ -0.18
CD9-207ENST00000538418 CLP1Q92989 425 aaKnown RBP13.91□□□□□ -0.18
CD9-207ENST00000538418 SIRT1Q96EB6 747 aa13.91□□□□□ -0.18
CD9-207ENST00000538418 FKBPLQ9UIM3 349 aa13.91□□□□□ -0.18
CD9-207ENST00000538418 RABGEF1Q9UJ41 708 aa13.91□□□□□ -0.18
CD9-207ENST00000538418 FAM69CQ0P6D2 419 aa13.9□□□□□ -0.18
CD9-207ENST00000538418 PTK7Q13308 1070 aa13.9□□□□□ -0.18
CD9-207ENST00000538418 FAM200AQ8TCP9 573 aa13.9□□□□□ -0.18
CD9-207ENST00000538418 ZNF16P17020 682 aaPredicted RBP13.88□□□□□ -0.19
CD9-207ENST00000538418 RASA1P20936 1047 aa13.88□□□□□ -0.19
CD9-207ENST00000538418 Q3C1V9 767 aa13.88□□□□□ -0.19
CD9-207ENST00000538418 CDCA7Q9BWT1 371 aaPredicted RBP13.88□□□□□ -0.19
CD9-207ENST00000538418 DCAF1Q9Y4B6 1507 aa13.88□□□□□ -0.19
CD9-207ENST00000538418 ATP5J2-PTCD1G3V325 749 aa13.87□□□□□ -0.19
CD9-207ENST00000538418 NOM1Q5C9Z4 860 aaKnown RBP13.87□□□□□ -0.19
CD9-207ENST00000538418 MORN1Q5T089 497 aa13.87□□□□□ -0.19
CD9-207ENST00000538418 BCL2L13Q9BXK5 485 aa13.87□□□□□ -0.19
CD9-207ENST00000538418 ZC3H4Q9UPT8 1303 aaKnown RBP13.87□□□□□ -0.19
CD9-207ENST00000538418 SERPINB4P48594 390 aa13.86□□□□□ -0.19
CD9-207ENST00000538418 FAM98CQ17RN3 349 aaKnown RBP13.86□□□□□ -0.19
CD9-207ENST00000538418 KMT5BQ4FZB7 885 aa13.86□□□□□ -0.19
CD9-207ENST00000538418 MARSP56192 900 aaKnown RBP13.85□□□□□ -0.19
CD9-207ENST00000538418 NCOA4Q13772 614 aa13.85□□□□□ -0.19
CD9-207ENST00000538418 SAMD7Q7Z3H4 446 aa13.85□□□□□ -0.19
CD9-207ENST00000538418 SLC27A5Q9Y2P5 690 aa13.85□□□□□ -0.19
CD9-207ENST00000538418 ATP2B4P23634 1241 aa13.84□□□□□ -0.19
CD9-207ENST00000538418 ANKMY2Q8IV38 441 aa13.84□□□□□ -0.19
CD9-207ENST00000538418 BICRAQ9NZM4 1560 aa13.83□□□□□ -0.19
CD9-207ENST00000538418 SLFNL1Q499Z3 407 aa13.83□□□□□ -0.2
CD9-207ENST00000538418 LZTS3O60299 673 aaPredicted RBP13.82□□□□□ -0.2
CD9-207ENST00000538418 PUS10Q3MIT2 529 aaKnown RBP13.82□□□□□ -0.2
CD9-207ENST00000538418 CEP126Q9P2H0 1117 aa13.82□□□□□ -0.2
CD9-207ENST00000538418 RNF40O75150 1001 aa13.81□□□□□ -0.2
CD9-207ENST00000538418 F12P00748 615 aaPredicted RBP13.81□□□□□ -0.2
CD9-207ENST00000538418 SWI5Q1ZZU3 235 aa13.81□□□□□ -0.2
CD9-207ENST00000538418 ZNF592Q92610 1267 aa13.81□□□□□ -0.2
CD9-207ENST00000538418 BIN2Q9UBW5 565 aaPredicted RBP13.81□□□□□ -0.2
CD9-207ENST00000538418 HOXB1P14653 301 aaPredicted RBP13.8□□□□□ -0.2
CD9-207ENST00000538418 PSEN2P49810 448 aa13.8□□□□□ -0.2
CD9-207ENST00000538418 ZCCHC6Q5VYS8 1495 aaKnown RBP13.8□□□□□ -0.2
CD9-207ENST00000538418 RNF135Q8IUD6 432 aa13.79□□□□□ -0.2
CD9-207ENST00000538418 PLPP7Q8NBV4 271 aa13.79□□□□□ -0.2
CD9-207ENST00000538418 GIPC2Q8TF65 315 aa13.79□□□□□ -0.2
CD9-207ENST00000538418 SLC4A5Q9BY07 1137 aa13.79□□□□□ -0.2
CD9-207ENST00000538418 UNC13AQ9UPW8 1703 aa13.78□□□□□ -0.2
CD9-207ENST00000538418 ACTN4O43707 911 aaKnown RBP13.78□□□□□ -0.2
CD9-207ENST00000538418 MCCD1P59942 119 aaPredicted RBP13.78□□□□□ -0.2
CD9-207ENST00000538418 PHTF2Q8N3S3 785 aa13.78□□□□□ -0.2
CD9-207ENST00000538418 DPYDQ12882 1025 aa13.77□□□□□ -0.21
CD9-207ENST00000538418 RNF19BQ6ZMZ0 732 aa13.77□□□□□ -0.21
CD9-207ENST00000538418 C1orf216Q8TAB5 229 aa13.77□□□□□ -0.21
CD9-207ENST00000538418 USB1Q9BQ65 265 aaKnown RBP13.77□□□□□ -0.21
CD9-207ENST00000538418 MAP10Q9P2G4 905 aa13.77□□□□□ -0.21
CD9-207ENST00000538418 ANKRD33BA6NCL7 494 aa13.76□□□□□ -0.21
CD9-207ENST00000538418 HMGB1P09429 215 aaKnown RBP13.76□□□□□ -0.21
CD9-207ENST00000538418 POTEJP0CG39 1038 aa13.76□□□□□ -0.21
CD9-207ENST00000538418 OGFOD1Q8N543 542 aa13.76□□□□□ -0.21
CD9-207ENST00000538418 EML3Q32P44 896 aa13.75□□□□□ -0.21
CD9-207ENST00000538418 NPAS4Q8IUM7 802 aa13.75□□□□□ -0.21
CD9-207ENST00000538418 GPSM3Q9Y4H4 160 aa13.75□□□□□ -0.21
CD9-207ENST00000538418 TCF3P15923 654 aa13.74□□□□□ -0.21
CD9-207ENST00000538418 SCNN1AP37088 669 aa13.74□□□□□ -0.21
CD9-207ENST00000538418 KCNH2Q12809 1159 aa13.74□□□□□ -0.21
CD9-207ENST00000538418 MAP7D1Q3KQU3 841 aa13.74□□□□□ -0.21
CD9-207ENST00000538418 BLOC1S3Q6QNY0 202 aa13.74□□□□□ -0.21
CD9-207ENST00000538418 PTK2Q05397 1052 aa13.73□□□□□ -0.21
CD9-207ENST00000538418 PTPRNQ16849 979 aa13.73□□□□□ -0.21
CD9-207ENST00000538418 ZNF326Q5BKZ1 582 aaKnown RBP13.73□□□□□ -0.21
CD9-207ENST00000538418 LAPTM4BQ86VI4 370 aa13.73□□□□□ -0.21
CD9-207ENST00000538418 TRIM50Q86XT4 487 aa13.72□□□□□ -0.21
CD9-207ENST00000538418 ZNF594Q96JF6 807 aaPredicted RBP13.72□□□□□ -0.21
CD9-207ENST00000538418 CHIC2Q9UKJ5 165 aa13.72□□□□□ -0.21
CD9-207ENST00000538418 SALL2Q9Y467 1007 aaPredicted RBP13.72□□□□□ -0.21
CD9-207ENST00000538418 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
CD9-207ENST00000538418 ARHGAP33O14559 1287 aa13.71□□□□□ -0.21
CD9-207ENST00000538418 ATP1A2P50993 1020 aa13.71□□□□□ -0.21
CD9-207ENST00000538418 CLDN10P78369 228 aa13.71□□□□□ -0.21
CD9-207ENST00000538418 PDXDC2PQ6P474 469 aa13.71□□□□□ -0.21
CD9-207ENST00000538418 DNAAF2Q9NVR5 837 aaKnown RBP13.71□□□□□ -0.21
CD9-207ENST00000538418 CTHP32929 405 aa13.7□□□□□ -0.22
CD9-207ENST00000538418 BRICD5Q6PL45 260 aa13.7□□□□□ -0.22
CD9-207ENST00000538418 TRAF7Q6Q0C0 670 aa13.7□□□□□ -0.22
CD9-207ENST00000538418 EGFL7Q9UHF1 273 aa13.7□□□□□ -0.22
CD9-207ENST00000538418 JUNDP17535 347 aa13.69□□□□□ -0.22
CD9-207ENST00000538418 GPKOWQ92917 476 aaPredicted RBP eCLIP13.69□□□□□ -0.22
CD9-207ENST00000538418 HSP90B1P14625 803 aaKnown RBP13.68□□□□□ -0.22
CD9-207ENST00000538418 LARGE2Q8N3Y3 721 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms