RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, human

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF1A-210	ENST00000537842	PRR7	Q8TB68	274 aa		4.25	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	USB1	Q9BQ65	265 aa	Known RBP	4.25	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	SLC6A16	Q9GZN6	736 aa		4.25	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	SYNJ2	O15056	1496 aa		4.24	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	MAGI1	Q96QZ7	1491 aa	Predicted RBP	4.24	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	FHAD1	B1AJZ9	1412 aa		4.24	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	NUP160	Q12769	1436 aa		4.24	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	PPEF1	O14829	653 aa	Predicted RBP	4.24	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	RTL5	Q5HYW3	569 aa	Predicted RBP	4.24	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	RETREG3	Q86VR2	466 aa		4.24	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	HELB	Q8NG08	1087 aa	Predicted RBP	4.24	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	CARMIL1	Q5VZK9	1371 aa		4.24	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	GRIN2A	Q12879	1464 aa		4.24	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	ERCC6L2	Q5T890	1561 aa		4.23	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	KIF27	Q86VH2	1401 aa		4.23	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	CFAP99	D6REC4	459 aa		4.23	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.23	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	FCF1	Q9Y324	198 aa	Known RBP	4.23	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	ARHGEF11	O15085	1522 aa		4.22	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	ERICH3	Q5RHP9	1530 aa		4.22	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	CLASP1	Q7Z460	1538 aa		4.22	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	ITGBL1	O95965	494 aa	Predicted RBP	4.22	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	USP17L8	P0C7I0	530 aa		4.22	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	CTH	P32929	405 aa		4.22	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	GGCX	P38435	758 aa		4.22	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	RFC5	P40937	340 aa		4.22	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	FBXO31	Q5XUX0	539 aa	Predicted RBP	4.22	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	BRICD5	Q6PL45	260 aa		4.22	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	ARAP1	Q96P48	1450 aa		4.22	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	CEP170	Q5SW79	1584 aa		4.22	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	CHD1	O14646	1710 aa		4.21	□□□□□ -1.73
TNFRSF1A-210	ENST00000537842	LILRB3	O75022	631 aa		4.21	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	JUND	P17535	347 aa		4.21	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	PPP1R18	Q6NYC8	613 aa		4.21	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	FAM160A2	Q8N612	972 aa	Predicted RBP	4.21	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	THAP11	Q96EK4	314 aa		4.21	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	NUDT12	Q9BQG2	462 aa		4.21	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	MAP10	Q9P2G4	905 aa		4.21	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	ADAMTS12	P58397	1594 aa		4.21	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	RIMBP3C	A6NJZ7	1639 aa		4.21	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	RIMBP3B	A6NNM3	1639 aa		4.21	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	RIMBP3	Q9UFD9	1639 aa		4.21	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	PRX	Q9BXM0	1461 aa		4.2	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	SPDYE5	A6NIY4	337 aa		4.2	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	RNF223	E7ERA6	249 aa		4.2	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	PER1	O15534	1290 aa	Predicted RBP	4.2	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	CTDSPL2	Q05D32	466 aa		4.2	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	LINC01559	Q495D7	138 aa		4.2	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	MSS51	Q4VC12	460 aa		4.2	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	PRPF38B	Q5VTL8	546 aa	Known RBP	4.2	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	LRRN4	Q8WUT4	740 aa		4.2	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	PBRM1	Q86U86	1689 aa		4.19	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	CCNYL3	P0C7X3	344 aa		4.19	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	GJA5	P36382	358 aa		4.19	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	GOPC	Q9HD26	462 aa		4.19	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.19	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	PRG4	Q92954	1404 aa	Predicted RBP	4.19	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	RAPGEF2	Q9Y4G8	1499 aa		4.18	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842		A0A0G2JS52	829 aa		4.18	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	ZBTB24	O43167	697 aa	Predicted RBP	4.18	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	DXO	O77932	396 aa	Known RBP	4.18	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	HMX1	Q9NP08	348 aa	Predicted RBP	4.18	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	SALL2	Q9Y467	1007 aa	Predicted RBP	4.18	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	KIAA0586	Q9BVV6	1533 aa		4.17	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	AGER	Q15109	404 aa		4.17	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	NR6A1	Q15406	480 aa		4.17	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	PTPRN	Q16849	979 aa		4.17	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	TUSC1	Q2TAM9	212 aa		4.17	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	PLA2G2C	Q5R387	149 aa		4.17	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	CARD14	Q9BXL6	1004 aa		4.17	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	SNRK	Q9NRH2	765 aa		4.17	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.17	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	DISP1	Q96F81	1524 aa		4.16	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	MAGEB6P1	A0A0J9YX57	407 aa		4.16	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	LOC105371045	A0A1W2PR82	267 aa		4.16	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	UBTF	P17480	764 aa	Known RBP	4.16	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	MMP16	P51512	607 aa		4.16	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	MCM6	Q14566	821 aa		4.16	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	PPP2R2D	Q66LE6	453 aa		4.16	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	ANKLE1	Q8NAG6	615 aa		4.16	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	EPS8L1	Q8TE68	723 aa		4.16	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	PRKD2	Q9BZL6	878 aa		4.16	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	SHROOM2	Q13796	1616 aa		4.15	□□□□□ -1.74
TNFRSF1A-210	ENST00000537842	ABL2	P42684	1182 aa		4.15	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	FOXC1	Q12948	553 aa		4.15	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	TRIM32	Q13049	653 aa		4.15	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	TMEM259	Q4ZIN3	620 aa		4.15	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	LYPD8	Q6UX82	237 aa		4.15	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	MTMR14	Q8NCE2	650 aa		4.15	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	UNC93B1	Q9H1C4	597 aa		4.15	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	TNFRSF10A	O00220	468 aa		4.14	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	SLC19A1	P41440	591 aa		4.14	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	DESI1	Q6ICB0	168 aa		4.14	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	PTCRA	Q6ISU1	281 aa	Predicted RBP	4.14	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	GDPD2	Q9HCC8	539 aa		4.14	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	TBC1D2B	Q9UPU7	963 aa		4.14	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	PTPRG	P23470	1445 aa		4.13	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	APBB1	O00213	710 aa		4.13	□□□□□ -1.75
TNFRSF1A-210	ENST00000537842	RAD21	O60216	631 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms