RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 STK26Q9P289 416 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 APAF1O14727 1248 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 OFD1O75665 1012 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 LMOD3Q0VAK6 560 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 JAKMIP3Q5VZ66 844 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 HDGFL2Q7Z4V5 671 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-215ENST00000537824 HDAC5Q9UQL6 1122 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 CPLX2Q6PUV4 134 aaKnown RBP6.72□□□□□ -1.33
CSMD1-215ENST00000537824 DNAAF4Q8WXU2 420 aa6.72□□□□□ -1.33
CSMD1-215ENST00000537824 CRACR2AQ9BSW2 395 aa6.72□□□□□ -1.33
CSMD1-215ENST00000537824 WDR97A6NE52 1622 aa6.72□□□□□ -1.33
CSMD1-215ENST00000537824 C16orf45Q96MC5 204 aaPredicted RBP6.72□□□□□ -1.33
CSMD1-215ENST00000537824 EPS15P42566 896 aa6.72□□□□□ -1.33
CSMD1-215ENST00000537824 NEK4P51957 841 aa6.72□□□□□ -1.33
CSMD1-215ENST00000537824 CCDC47Q96A33 483 aaKnown RBP6.72□□□□□ -1.33
CSMD1-215ENST00000537824 FILIP1Q7Z7B0 1213 aa6.72□□□□□ -1.33
CSMD1-215ENST00000537824 KANK1Q14678 1352 aa6.72□□□□□ -1.33
CSMD1-215ENST00000537824 BAZ1AQ9NRL2 1556 aaPredicted RBP6.72□□□□□ -1.33
CSMD1-215ENST00000537824 K7ELQ4 463 aaPredicted RBP6.72□□□□□ -1.33
CSMD1-215ENST00000537824 SMG6Q86US8 1419 aaKnown RBP6.72□□□□□ -1.33
CSMD1-215ENST00000537824 CEBPZQ03701 1054 aaKnown RBP6.72□□□□□ -1.33
CSMD1-215ENST00000537824 IQCEQ6IPM2 695 aa6.72□□□□□ -1.33
CSMD1-215ENST00000537824 MCM5P33992 734 aa6.71□□□□□ -1.33
CSMD1-215ENST00000537824 SEPT7Q16181 437 aaKnown RBP6.71□□□□□ -1.33
CSMD1-215ENST00000537824 PDZRN3Q9UPQ7 1066 aa6.71□□□□□ -1.33
CSMD1-215ENST00000537824 GOLGA6L10A0A0M3HER8 536 aa6.71□□□□□ -1.33
CSMD1-215ENST00000537824 IGSF3O75054 1194 aa6.71□□□□□ -1.34
CSMD1-215ENST00000537824 DHX8Q14562 1220 aaKnown RBP6.71□□□□□ -1.34
CSMD1-215ENST00000537824 SAFBQ15424 915 aaKnown RBP eCLIP6.71□□□□□ -1.34
CSMD1-215ENST00000537824 FILIP1LQ4L180 1135 aa6.71□□□□□ -1.34
CSMD1-215ENST00000537824 CWC22Q9HCG8 908 aaKnown RBP6.71□□□□□ -1.34
CSMD1-215ENST00000537824 CLGNO14967 610 aa6.71□□□□□ -1.34
CSMD1-215ENST00000537824 ZNHIT6Q9NWK9 470 aaKnown RBP6.71□□□□□ -1.34
CSMD1-215ENST00000537824 MYH8P13535 1937 aa6.71□□□□□ -1.34
CSMD1-215ENST00000537824 SPAG17Q6Q759 2223 aa6.71□□□□□ -1.34
CSMD1-215ENST00000537824 WDR33Q9C0J8 1336 aaKnown RBP6.71□□□□□ -1.34
CSMD1-215ENST00000537824 CTR9Q6PD62 1173 aa6.71□□□□□ -1.34
CSMD1-215ENST00000537824 NFXL1Q6ZNB6 911 aa6.71□□□□□ -1.34
CSMD1-215ENST00000537824 CCDC91Q7Z6B0 441 aa6.71□□□□□ -1.34
CSMD1-215ENST00000537824 SMAP1Q8IYB5 467 aaPredicted RBP6.71□□□□□ -1.34
CSMD1-215ENST00000537824 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.71□□□□□ -1.34
CSMD1-215ENST00000537824 SRRTQ9BXP5 876 aaKnown RBP6.71□□□□□ -1.34
CSMD1-215ENST00000537824 SERPINC1P01008 464 aa6.71□□□□□ -1.34
CSMD1-215ENST00000537824 MAP9Q49MG5 647 aa6.71□□□□□ -1.34
CSMD1-215ENST00000537824 MYH7P12883 1935 aa6.7□□□□□ -1.34
CSMD1-215ENST00000537824 LUZP1Q86V48 1076 aa6.7□□□□□ -1.34
CSMD1-215ENST00000537824 MYH15Q9Y2K3 1946 aa6.7□□□□□ -1.34
CSMD1-215ENST00000537824 CCDC7Q96M83 1385 aa6.7□□□□□ -1.34
CSMD1-215ENST00000537824 ZNF330Q9Y3S2 320 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-215ENST00000537824 MICALCLQ6ZW33 695 aa6.7□□□□□ -1.34
CSMD1-215ENST00000537824 STK38Q15208 465 aa6.7□□□□□ -1.34
CSMD1-215ENST00000537824 ELL2O00472 640 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-215ENST00000537824 NF2P35240 595 aa6.7□□□□□ -1.34
CSMD1-215ENST00000537824 AAMPQ13685 434 aa6.7□□□□□ -1.34
CSMD1-215ENST00000537824 NUP155O75694 1391 aa6.7□□□□□ -1.34
CSMD1-215ENST00000537824 ROCK1Q13464 1354 aa6.7□□□□□ -1.34
CSMD1-215ENST00000537824 EZRP15311 586 aaKnown RBP6.7□□□□□ -1.34
CSMD1-215ENST00000537824 ZNF396Q96N95 335 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-215ENST00000537824 MAGEC2Q9UBF1 373 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-215ENST00000537824 CLCN1P35523 988 aa6.7□□□□□ -1.34
CSMD1-215ENST00000537824 MAP3K11Q16584 847 aa6.7□□□□□ -1.34
CSMD1-215ENST00000537824 NPM1P06748 294 aaKnown RBP eCLIP6.69□□□□□ -1.34
CSMD1-215ENST00000537824 CCDC183Q5T5S1 534 aa6.69□□□□□ -1.34
CSMD1-215ENST00000537824 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.69□□□□□ -1.34
CSMD1-215ENST00000537824 GBP3Q9H0R5 595 aa6.69□□□□□ -1.34
CSMD1-215ENST00000537824 CCAR1Q8IX12 1150 aaKnown RBP6.69□□□□□ -1.34
CSMD1-215ENST00000537824 TRMT1Q9NXH9 659 aaKnown RBP6.69□□□□□ -1.34
CSMD1-215ENST00000537824 IFIT2P09913 472 aaKnown RBP6.69□□□□□ -1.34
CSMD1-215ENST00000537824 ST20-MTHFSA0A0A6YYL1 179 aa6.69□□□□□ -1.34
CSMD1-215ENST00000537824 MCM2P49736 904 aa6.69□□□□□ -1.34
CSMD1-215ENST00000537824 NINLQ9Y2I6 1382 aa6.69□□□□□ -1.34
CSMD1-215ENST00000537824 CASQ1P31415 396 aa6.69□□□□□ -1.34
CSMD1-215ENST00000537824 CFAP45Q9UL16 551 aa6.69□□□□□ -1.34
CSMD1-215ENST00000537824 SARNPP82979 210 aaKnown RBP6.69□□□□□ -1.34
CSMD1-215ENST00000537824 KRT85P78386 507 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 PRIMPOLQ96LW4 560 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 BRD4O60885 1362 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-215ENST00000537824 BMS1Q14692 1282 aaKnown RBP6.68□□□□□ -1.34
CSMD1-215ENST00000537824 CCDC181Q5TID7 509 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 KDM4AO75164 1064 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 KIAA1328Q86T90 577 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 CBFA2T2O43439 604 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 SFPQP23246 707 aaKnown RBP eCLIP6.68□□□□□ -1.34
CSMD1-215ENST00000537824 NUP62CLQ9H1M0 184 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 RAI14Q9P0K7 980 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 RSPH14Q9UHP6 348 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 FAM177BA6PVY3 158 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 CEP57L1Q8IYX8 460 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 CPSF2Q9P2I0 782 aaKnown RBP6.68□□□□□ -1.34
CSMD1-215ENST00000537824 PANK2Q9BZ23 570 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 ANKRD62A6NC57 917 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 CDCA7LQ96GN5 454 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 ZFYVE27Q5T4F4 411 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 C10orf67Q8IYJ2 551 aa6.68□□□□□ -1.34
CSMD1-215ENST00000537824 SSR1P43307 286 aaKnown RBP6.68□□□□□ -1.34
CSMD1-215ENST00000537824 ATP2B1P20020 1258 aa6.67□□□□□ -1.34
CSMD1-215ENST00000537824 ME1P48163 572 aa6.67□□□□□ -1.34
CSMD1-215ENST00000537824 SMARCC1Q92922 1105 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-215ENST00000537824 C11orf95C9JLR9 678 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-215ENST00000537824 RBM27Q9P2N5 1060 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms