RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 ZNF784Q8NCA9 323 aaPredicted RBP23.16■■□□□ 1.3
LPCAT3-206ENST00000537179 FAM196AQ6ZSG2 479 aa23.15■■□□□ 1.3
LPCAT3-206ENST00000537179 CHD4Q14839 1912 aa23.15■■□□□ 1.3
LPCAT3-206ENST00000537179 NRKQ7Z2Y5 1582 aa23.14■■□□□ 1.3
LPCAT3-206ENST00000537179 YTHDC2Q9H6S0 1430 aaKnown RBP23.14■■□□□ 1.29
LPCAT3-206ENST00000537179 CASZ1Q86V15 1759 aa23.14■■□□□ 1.29
LPCAT3-206ENST00000537179 KCNQ2O43526 872 aa23.13■■□□□ 1.29
LPCAT3-206ENST00000537179 TMEM132EQ6IEE7 984 aa23.13■■□□□ 1.29
LPCAT3-206ENST00000537179 NBPF8Q3BBV2 869 aa23.12■■□□□ 1.29
LPCAT3-206ENST00000537179 NBPF14Q5TI25 921 aa23.12■■□□□ 1.29
LPCAT3-206ENST00000537179 MYOM1P52179 1685 aa23.11■■□□□ 1.29
LPCAT3-206ENST00000537179 SPATA31A1Q5TZJ5 1347 aa23.09■■□□□ 1.29
LPCAT3-206ENST00000537179 PIK3C2GO75747 1445 aa23.09■■□□□ 1.29
LPCAT3-206ENST00000537179 RGPD3A6NKT7 1758 aaPredicted RBP23.09■■□□□ 1.29
LPCAT3-206ENST00000537179 RGPD4Q7Z3J3 1758 aa23.09■■□□□ 1.29
LPCAT3-206ENST00000537179 PHRF1Q9P1Y6 1649 aaKnown RBP23.08■■□□□ 1.28
LPCAT3-206ENST00000537179 PMFBP1Q8TBY8 1022 aa23.07■■□□□ 1.28
LPCAT3-206ENST00000537179 ANKARQ7Z5J8 1434 aa23.07■■□□□ 1.28
LPCAT3-206ENST00000537179 CEP350Q5VT06 3117 aa23.06■■□□□ 1.28
LPCAT3-206ENST00000537179 C1QTNF8P60827 252 aa23.04■■□□□ 1.28
LPCAT3-206ENST00000537179 SPATA31E1Q6ZUB1 1445 aa23.03■■□□□ 1.28
LPCAT3-206ENST00000537179 SIRT1Q96EB6 747 aa23.03■■□□□ 1.28
LPCAT3-206ENST00000537179 PRDM11Q9NQV5 511 aa23.03■■□□□ 1.28
LPCAT3-206ENST00000537179 ANKRD30BQ9BXX2 1392 aa23.02■■□□□ 1.28
LPCAT3-206ENST00000537179 SBF2Q86WG5 1849 aa23.01■■□□□ 1.27
LPCAT3-206ENST00000537179 PARP4Q9UKK3 1724 aaKnown RBP22.99■■□□□ 1.27
LPCAT3-206ENST00000537179 GPRASP1Q5JY77 1395 aa22.99■■□□□ 1.27
LPCAT3-206ENST00000537179 KIAA0232Q92628 1395 aa22.99■■□□□ 1.27
LPCAT3-206ENST00000537179 STRN4Q9NRL3 753 aa22.98■■□□□ 1.27
LPCAT3-206ENST00000537179 PEAK1Q9H792 1746 aa22.98■■□□□ 1.27
LPCAT3-206ENST00000537179 PDE3BQ13370 1112 aa22.97■■□□□ 1.27
LPCAT3-206ENST00000537179 SAFB2Q14151 953 aaKnown RBP eCLIP22.97■■□□□ 1.27
LPCAT3-206ENST00000537179 RGL3Q3MIN7 710 aa22.97■■□□□ 1.27
LPCAT3-206ENST00000537179 ACIN1Q9UKV3 1341 aaKnown RBP22.97■■□□□ 1.27
LPCAT3-206ENST00000537179 USP35Q9P2H5 1018 aa22.96■■□□□ 1.27
LPCAT3-206ENST00000537179 SSH2Q76I76 1423 aa22.96■■□□□ 1.27
LPCAT3-206ENST00000537179 CHRNA2Q15822 529 aa22.95■■□□□ 1.26
LPCAT3-206ENST00000537179 DLC1Q96QB1 1528 aa22.95■■□□□ 1.26
LPCAT3-206ENST00000537179 SLC4A1APQ9BWU0 796 aaKnown RBP22.95■■□□□ 1.26
LPCAT3-206ENST00000537179 ANO8Q9HCE9 1232 aaPredicted RBP22.95■■□□□ 1.26
LPCAT3-206ENST00000537179 BARGINQ6ZT62 677 aa22.94■■□□□ 1.26
LPCAT3-206ENST00000537179 PRAM1Q96QH2 718 aa22.94■■□□□ 1.26
LPCAT3-206ENST00000537179 TULP4Q9NRJ4 1543 aa22.93■■□□□ 1.26
LPCAT3-206ENST00000537179 LMO7Q8WWI1 1683 aa22.93■■□□□ 1.26
LPCAT3-206ENST00000537179 ITSN1Q15811 1721 aa22.92■■□□□ 1.26
LPCAT3-206ENST00000537179 PDGFDQ9GZP0 370 aaPredicted RBP22.92■■□□□ 1.26
LPCAT3-206ENST00000537179 PRR36Q9H6K5 1346 aa22.91■■□□□ 1.26
LPCAT3-206ENST00000537179 DHX57Q6P158 1386 aaKnown RBP22.9■■□□□ 1.26
LPCAT3-206ENST00000537179 PTGER2P43116 358 aa22.9■■□□□ 1.26
LPCAT3-206ENST00000537179 ZBTB7AO95365 584 aa22.89■■□□□ 1.25
LPCAT3-206ENST00000537179 LRRC37A3O60309 1634 aa22.89■■□□□ 1.25
LPCAT3-206ENST00000537179 GOLGB1Q14789 3259 aaKnown RBP22.88■■□□□ 1.25
LPCAT3-206ENST00000537179 PAK3O75914 559 aaPredicted RBP22.88■■□□□ 1.25
LPCAT3-206ENST00000537179 C14orf93Q9H972 538 aaKnown RBP22.88■■□□□ 1.25
LPCAT3-206ENST00000537179 EIF3AQ14152 1382 aaKnown RBP22.87■■□□□ 1.25
LPCAT3-206ENST00000537179 OVOS2A0A0G2JMS6 1433 aa22.86■■□□□ 1.25
LPCAT3-206ENST00000537179 OVOS2A0A0J9YW53 1432 aa22.86■■□□□ 1.25
LPCAT3-206ENST00000537179 OVOS2Q6IE36 1432 aa22.86■■□□□ 1.25
LPCAT3-206ENST00000537179 ZC3H6P61129 1189 aaKnown RBP22.86■■□□□ 1.25
LPCAT3-206ENST00000537179 FHDC1Q9C0D6 1143 aaPredicted RBP22.86■■□□□ 1.25
LPCAT3-206ENST00000537179 ATP7BP35670 1465 aa22.85■■□□□ 1.25
LPCAT3-206ENST00000537179 LARP1Q6PKG0 1096 aaKnown RBP22.85■■□□□ 1.25
LPCAT3-206ENST00000537179 TCP11L2Q8N4U5 519 aa22.85■■□□□ 1.25
LPCAT3-206ENST00000537179 SYT17Q9BSW7 474 aa22.85■■□□□ 1.25
LPCAT3-206ENST00000537179 WNK3Q9BYP7 1800 aa22.85■■□□□ 1.25
LPCAT3-206ENST00000537179 CFAP70Q5T0N1 1121 aa22.84■■□□□ 1.25
LPCAT3-206ENST00000537179 HIRIP3Q9BW71 556 aaPredicted RBP22.84■■□□□ 1.25
LPCAT3-206ENST00000537179 POGKQ9P215 609 aa22.84■■□□□ 1.25
LPCAT3-206ENST00000537179 PLSCR1O15162 318 aa22.83■■□□□ 1.25
LPCAT3-206ENST00000537179 NGDNQ8NEJ9 315 aaKnown RBP22.83■■□□□ 1.25
LPCAT3-206ENST00000537179 ATF5Q9Y2D1 282 aaPredicted RBP22.83■■□□□ 1.25
LPCAT3-206ENST00000537179 AKAP12Q02952 1782 aa22.82■■□□□ 1.24
LPCAT3-206ENST00000537179 EVA1CP58658 441 aa22.82■■□□□ 1.24
LPCAT3-206ENST00000537179 ADGRB1O14514 1584 aa22.81■■□□□ 1.24
LPCAT3-206ENST00000537179 GIGYF1O75420 1035 aaPredicted RBP22.8■■□□□ 1.24
LPCAT3-206ENST00000537179 SHANK3Q9BYB0 1731 aa22.79■■□□□ 1.24
LPCAT3-206ENST00000537179 C11orf95C9JLR9 678 aaPredicted RBP22.79■■□□□ 1.24
LPCAT3-206ENST00000537179 MINK1Q8N4C8 1332 aaPredicted RBP22.79■■□□□ 1.24
LPCAT3-206ENST00000537179 BCL11BQ9C0K0 894 aaPredicted RBP22.78■■□□□ 1.24
LPCAT3-206ENST00000537179 THRAP3Q9Y2W1 955 aaKnown RBP22.78■■□□□ 1.24
LPCAT3-206ENST00000537179 COL5A2P05997 1499 aaPredicted RBP22.78■■□□□ 1.24
LPCAT3-206ENST00000537179 TOPAZ1Q8N9V7 1692 aa22.77■■□□□ 1.24
LPCAT3-206ENST00000537179 NUTM2GQ5VZR2 741 aa22.77■■□□□ 1.24
LPCAT3-206ENST00000537179 PTF1AQ7RTS3 328 aa22.76■■□□□ 1.23
LPCAT3-206ENST00000537179 SGIP1Q9BQI5 828 aa22.76■■□□□ 1.23
LPCAT3-206ENST00000537179 WASLO00401 505 aaPredicted RBP22.75■■□□□ 1.23
LPCAT3-206ENST00000537179 PROM2Q8N271 834 aa22.75■■□□□ 1.23
LPCAT3-206ENST00000537179 CPDO75976 1380 aa22.75■■□□□ 1.23
LPCAT3-206ENST00000537179 PPARGC1BQ86YN6 1023 aaKnown RBP22.74■■□□□ 1.23
LPCAT3-206ENST00000537179 MTFR1LQ9H019 292 aa22.73■■□□□ 1.23
LPCAT3-206ENST00000537179 MAP3K5Q99683 1374 aa22.73■■□□□ 1.23
LPCAT3-206ENST00000537179 ARHGEF28Q8N1W1 1705 aaKnown RBP22.72■■□□□ 1.23
LPCAT3-206ENST00000537179 CRB1P82279 1406 aa22.72■■□□□ 1.23
LPCAT3-206ENST00000537179 STK32BQ9NY57 414 aa22.71■■□□□ 1.23
LPCAT3-206ENST00000537179 TRAK1Q9UPV9 953 aa22.7■■□□□ 1.22
LPCAT3-206ENST00000537179 PAPPAQ13219 1627 aa22.69■■□□□ 1.22
LPCAT3-206ENST00000537179 SLC15A2Q16348 729 aa22.69■■□□□ 1.22
LPCAT3-206ENST00000537179 USP19O94966 1318 aa22.68■■□□□ 1.22
LPCAT3-206ENST00000537179 ARXQ96QS3 562 aa22.67■■□□□ 1.22
LPCAT3-206ENST00000537179 BCL9O00512 1426 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms