RNA–Protein interactions for RNA: ENST00000536400.5

PRKCH-202, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-202ENST00000536400 TRPM3Q9HCF6 1732 aaPredicted RBP11.25□□□□□ -0.61
PRKCH-202ENST00000536400 SPATA31A5Q5VU36 1347 aa11.25□□□□□ -0.61
PRKCH-202ENST00000536400 SPATA31A7Q8IWB4 1347 aa11.25□□□□□ -0.61
PRKCH-202ENST00000536400 YY1P25490 414 aa11.24□□□□□ -0.61
PRKCH-202ENST00000536400 RGL3Q3MIN7 710 aa11.24□□□□□ -0.61
PRKCH-202ENST00000536400 CAMKK2Q96RR4 588 aa11.24□□□□□ -0.61
PRKCH-202ENST00000536400 ALS2Q96Q42 1657 aa11.24□□□□□ -0.61
PRKCH-202ENST00000536400 HOXD11P31277 338 aaPredicted RBP11.23□□□□□ -0.61
PRKCH-202ENST00000536400 FOXD4L1Q9NU39 408 aa11.23□□□□□ -0.61
PRKCH-202ENST00000536400 ADGRB2O60241 1585 aa11.22□□□□□ -0.61
PRKCH-202ENST00000536400 ANKARQ7Z5J8 1434 aa11.22□□□□□ -0.61
PRKCH-202ENST00000536400 PMFBP1Q8TBY8 1022 aa11.22□□□□□ -0.61
PRKCH-202ENST00000536400 PARD3Q8TEW0 1356 aa11.22□□□□□ -0.61
PRKCH-202ENST00000536400 C14orf93Q9H972 538 aaKnown RBP11.22□□□□□ -0.61
PRKCH-202ENST00000536400 CRYBG1Q9Y4K1 1723 aa11.21□□□□□ -0.61
PRKCH-202ENST00000536400 RREB1Q92766 1687 aa11.21□□□□□ -0.61
PRKCH-202ENST00000536400 PPARGC1BQ86YN6 1023 aaKnown RBP11.21□□□□□ -0.61
PRKCH-202ENST00000536400 TRIM37O94972 964 aa11.2□□□□□ -0.62
PRKCH-202ENST00000536400 FAM196AQ6ZSG2 479 aa11.2□□□□□ -0.62
PRKCH-202ENST00000536400 PRAM1Q96QH2 718 aa11.2□□□□□ -0.62
PRKCH-202ENST00000536400 SPATA31A1Q5TZJ5 1347 aa11.19□□□□□ -0.62
PRKCH-202ENST00000536400 NUP188Q5SRE5 1749 aa11.19□□□□□ -0.62
PRKCH-202ENST00000536400 DHX57Q6P158 1386 aaKnown RBP11.18□□□□□ -0.62
PRKCH-202ENST00000536400 APBA3O96018 575 aa11.18□□□□□ -0.62
PRKCH-202ENST00000536400 CACNB1Q02641 598 aaPredicted RBP11.18□□□□□ -0.62
PRKCH-202ENST00000536400 SAFB2Q14151 953 aaKnown RBP eCLIP11.18□□□□□ -0.62
PRKCH-202ENST00000536400 DLC1Q96QB1 1528 aa11.18□□□□□ -0.62
PRKCH-202ENST00000536400 GPRASP1Q5JY77 1395 aa11.17□□□□□ -0.62
PRKCH-202ENST00000536400 ACIN1Q9UKV3 1341 aaKnown RBP11.17□□□□□ -0.62
PRKCH-202ENST00000536400 CFAP70Q5T0N1 1121 aa11.17□□□□□ -0.62
PRKCH-202ENST00000536400 PRR36Q9H6K5 1346 aa11.16□□□□□ -0.62
PRKCH-202ENST00000536400 PRDM11Q9NQV5 511 aa11.16□□□□□ -0.62
PRKCH-202ENST00000536400 NBPF8Q3BBV2 869 aa11.15□□□□□ -0.62
PRKCH-202ENST00000536400 NBPF14Q5TI25 921 aa11.15□□□□□ -0.62
PRKCH-202ENST00000536400 POGKQ9P215 609 aa11.15□□□□□ -0.62
PRKCH-202ENST00000536400 KIAA0232Q92628 1395 aa11.15□□□□□ -0.63
PRKCH-202ENST00000536400 NINLQ9Y2I6 1382 aa11.15□□□□□ -0.63
PRKCH-202ENST00000536400 MPHOSPH9Q99550 1183 aa11.14□□□□□ -0.63
PRKCH-202ENST00000536400 SPON1Q9HCB6 807 aa11.14□□□□□ -0.63
PRKCH-202ENST00000536400 EIF3AQ14152 1382 aaKnown RBP11.14□□□□□ -0.63
PRKCH-202ENST00000536400 TULP4Q9NRJ4 1543 aa11.14□□□□□ -0.63
PRKCH-202ENST00000536400 KCNQ2O43526 872 aa11.13□□□□□ -0.63
PRKCH-202ENST00000536400 BARGINQ6ZT62 677 aa11.13□□□□□ -0.63
PRKCH-202ENST00000536400 PPP1R1BQ9UD71 204 aaPredicted RBP11.13□□□□□ -0.63
PRKCH-202ENST00000536400 PHRF1Q9P1Y6 1649 aaKnown RBP11.13□□□□□ -0.63
PRKCH-202ENST00000536400 ADGRB1O14514 1584 aa11.12□□□□□ -0.63
PRKCH-202ENST00000536400 CAMTA1Q9Y6Y1 1673 aa11.12□□□□□ -0.63
PRKCH-202ENST00000536400 PDE3BQ13370 1112 aa11.12□□□□□ -0.63
PRKCH-202ENST00000536400 CHRNA2Q15822 529 aa11.12□□□□□ -0.63
PRKCH-202ENST00000536400 NGDNQ8NEJ9 315 aaKnown RBP11.12□□□□□ -0.63
PRKCH-202ENST00000536400 HIRIP3Q9BW71 556 aaPredicted RBP11.12□□□□□ -0.63
PRKCH-202ENST00000536400 STRN4Q9NRL3 753 aa11.12□□□□□ -0.63
PRKCH-202ENST00000536400 SSH2Q76I76 1423 aa11.11□□□□□ -0.63
PRKCH-202ENST00000536400 WASLO00401 505 aaPredicted RBP11.11□□□□□ -0.63
PRKCH-202ENST00000536400 PAK3O75914 559 aaPredicted RBP11.11□□□□□ -0.63
PRKCH-202ENST00000536400 USP35Q9P2H5 1018 aa11.1□□□□□ -0.63
PRKCH-202ENST00000536400 RGPD3A6NKT7 1758 aaPredicted RBP11.1□□□□□ -0.63
PRKCH-202ENST00000536400 RGPD4Q7Z3J3 1758 aa11.1□□□□□ -0.63
PRKCH-202ENST00000536400 MINK1Q8N4C8 1332 aaPredicted RBP11.09□□□□□ -0.63
PRKCH-202ENST00000536400 CASZ1Q86V15 1759 aa11.09□□□□□ -0.63
PRKCH-202ENST00000536400 ATP7BP35670 1465 aa11.09□□□□□ -0.63
PRKCH-202ENST00000536400 ZC3H6P61129 1189 aaKnown RBP11.09□□□□□ -0.63
PRKCH-202ENST00000536400 TRAK1Q9UPV9 953 aa11.09□□□□□ -0.63
PRKCH-202ENST00000536400 ITSN1Q15811 1721 aa11.09□□□□□ -0.63
PRKCH-202ENST00000536400 PARP4Q9UKK3 1724 aaKnown RBP11.09□□□□□ -0.63
PRKCH-202ENST00000536400 SBF2Q86WG5 1849 aa11.08□□□□□ -0.64
PRKCH-202ENST00000536400 EVA1CP58658 441 aa11.08□□□□□ -0.64
PRKCH-202ENST00000536400 LARP1Q6PKG0 1096 aaKnown RBP11.08□□□□□ -0.64
PRKCH-202ENST00000536400 TCP11L2Q8N4U5 519 aa11.08□□□□□ -0.64
PRKCH-202ENST00000536400 LMO7Q8WWI1 1683 aa11.08□□□□□ -0.64
PRKCH-202ENST00000536400 PEAK1Q9H792 1746 aa11.07□□□□□ -0.64
PRKCH-202ENST00000536400 C11orf95C9JLR9 678 aaPredicted RBP11.07□□□□□ -0.64
PRKCH-202ENST00000536400 ZNF784Q8NCA9 323 aaPredicted RBP11.07□□□□□ -0.64
PRKCH-202ENST00000536400 THRAP3Q9Y2W1 955 aaKnown RBP11.07□□□□□ -0.64
PRKCH-202ENST00000536400 NRKQ7Z2Y5 1582 aa11.07□□□□□ -0.64
PRKCH-202ENST00000536400 CPDO75976 1380 aa11.06□□□□□ -0.64
PRKCH-202ENST00000536400 PLSCR1O15162 318 aa11.06□□□□□ -0.64
PRKCH-202ENST00000536400 NUTM2GQ5VZR2 741 aa11.06□□□□□ -0.64
PRKCH-202ENST00000536400 NUDT16Q96DE0 195 aaKnown RBP11.06□□□□□ -0.64
PRKCH-202ENST00000536400 ANO8Q9HCE9 1232 aaPredicted RBP11.06□□□□□ -0.64
PRKCH-202ENST00000536400 CHD4Q14839 1912 aa11.05□□□□□ -0.64
PRKCH-202ENST00000536400 POLR3AO14802 1390 aaPredicted RBP11.05□□□□□ -0.64
PRKCH-202ENST00000536400 OVOS2A0A0G2JMS6 1433 aa11.04□□□□□ -0.64
PRKCH-202ENST00000536400 OVOS2A0A0J9YW53 1432 aa11.04□□□□□ -0.64
PRKCH-202ENST00000536400 OVOS2Q6IE36 1432 aa11.04□□□□□ -0.64
PRKCH-202ENST00000536400 GOLGB1Q14789 3259 aaKnown RBP11.04□□□□□ -0.64
PRKCH-202ENST00000536400 PTGER2P43116 358 aa11.04□□□□□ -0.64
PRKCH-202ENST00000536400 PDGFDQ9GZP0 370 aaPredicted RBP11.04□□□□□ -0.64
PRKCH-202ENST00000536400 MYOM1P52179 1685 aa11.04□□□□□ -0.64
PRKCH-202ENST00000536400 USP19O94966 1318 aa11.04□□□□□ -0.64
PRKCH-202ENST00000536400 COL5A2P05997 1499 aaPredicted RBP11.03□□□□□ -0.64
PRKCH-202ENST00000536400 TOPAZ1Q8N9V7 1692 aa11.03□□□□□ -0.64
PRKCH-202ENST00000536400 ARHGEF28Q8N1W1 1705 aaKnown RBP11.03□□□□□ -0.64
PRKCH-202ENST00000536400 ACEP12821 1306 aa11.03□□□□□ -0.64
PRKCH-202ENST00000536400 PROM2Q8N271 834 aa11.02□□□□□ -0.65
PRKCH-202ENST00000536400 RNF39Q9H2S5 420 aa11.02□□□□□ -0.65
PRKCH-202ENST00000536400 LRRC37A3O60309 1634 aa11.02□□□□□ -0.65
PRKCH-202ENST00000536400 SENP3-EIF4A1A0A087X0R7 540 aa11.01□□□□□ -0.65
PRKCH-202ENST00000536400 PLEKHG3A1L390 1219 aa11.01□□□□□ -0.65
PRKCH-202ENST00000536400 ZBTB7AO95365 584 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms