RNA–Protein interactions for RNA: ENST00000535883.5

LRTOMT-211, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 1,263 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-211ENST00000535883 C14orf93Q9H972 538 aaKnown RBP13.41□□□□□ -0.26
LRTOMT-211ENST00000535883 ALS2Q96Q42 1657 aa13.4□□□□□ -0.26
LRTOMT-211ENST00000535883 PRAM1Q96QH2 718 aa13.4□□□□□ -0.26
LRTOMT-211ENST00000535883 COL14A1Q05707 1796 aaKnown RBP13.4□□□□□ -0.26
LRTOMT-211ENST00000535883 GOLGB1Q14789 3259 aaKnown RBP13.4□□□□□ -0.26
LRTOMT-211ENST00000535883 CHRNA2Q15822 529 aa13.39□□□□□ -0.27
LRTOMT-211ENST00000535883 FAM196AQ6ZSG2 479 aa13.39□□□□□ -0.27
LRTOMT-211ENST00000535883 PDGFDQ9GZP0 370 aaPredicted RBP13.39□□□□□ -0.27
LRTOMT-211ENST00000535883 RREB1Q92766 1687 aa13.39□□□□□ -0.27
LRTOMT-211ENST00000535883 CAMTA1Q9Y6Y1 1673 aa13.39□□□□□ -0.27
LRTOMT-211ENST00000535883 NUP188Q5SRE5 1749 aa13.39□□□□□ -0.27
LRTOMT-211ENST00000535883 CRYBG1Q9Y4K1 1723 aa13.39□□□□□ -0.27
LRTOMT-211ENST00000535883 ACIN1Q9UKV3 1341 aaKnown RBP13.38□□□□□ -0.27
LRTOMT-211ENST00000535883 ANKRD30BQ9BXX2 1392 aa13.37□□□□□ -0.27
LRTOMT-211ENST00000535883 KCNQ2O43526 872 aa13.37□□□□□ -0.27
LRTOMT-211ENST00000535883 HIRIP3Q9BW71 556 aaPredicted RBP13.37□□□□□ -0.27
LRTOMT-211ENST00000535883 KIAA0232Q92628 1395 aa13.36□□□□□ -0.27
LRTOMT-211ENST00000535883 PTF1AQ7RTS3 328 aa13.36□□□□□ -0.27
LRTOMT-211ENST00000535883 ZNF784Q8NCA9 323 aaPredicted RBP13.36□□□□□ -0.27
LRTOMT-211ENST00000535883 PARD3Q8TEW0 1356 aa13.35□□□□□ -0.27
LRTOMT-211ENST00000535883 SPON1Q9HCB6 807 aa13.35□□□□□ -0.27
LRTOMT-211ENST00000535883 ANO8Q9HCE9 1232 aaPredicted RBP13.35□□□□□ -0.27
LRTOMT-211ENST00000535883 PRDM11Q9NQV5 511 aa13.35□□□□□ -0.27
LRTOMT-211ENST00000535883 STRN4Q9NRL3 753 aa13.35□□□□□ -0.27
LRTOMT-211ENST00000535883 ANKARQ7Z5J8 1434 aa13.34□□□□□ -0.27
LRTOMT-211ENST00000535883 USP35Q9P2H5 1018 aa13.34□□□□□ -0.27
LRTOMT-211ENST00000535883 ZC3H6P61129 1189 aaKnown RBP13.33□□□□□ -0.28
LRTOMT-211ENST00000535883 ADGRB2O60241 1585 aa13.32□□□□□ -0.28
LRTOMT-211ENST00000535883 NUTM2GQ5VZR2 741 aa13.32□□□□□ -0.28
LRTOMT-211ENST00000535883 LARP1Q6PKG0 1096 aaKnown RBP13.32□□□□□ -0.28
LRTOMT-211ENST00000535883 BARGINQ6ZT62 677 aa13.32□□□□□ -0.28
LRTOMT-211ENST00000535883 PROM2Q8N271 834 aa13.32□□□□□ -0.28
LRTOMT-211ENST00000535883 DHX57Q6P158 1386 aaKnown RBP13.32□□□□□ -0.28
LRTOMT-211ENST00000535883 NINLQ9Y2I6 1382 aa13.32□□□□□ -0.28
LRTOMT-211ENST00000535883 PTGER2P43116 358 aa13.31□□□□□ -0.28
LRTOMT-211ENST00000535883 PPP1R1BQ9UD71 204 aaPredicted RBP13.31□□□□□ -0.28
LRTOMT-211ENST00000535883 MINK1Q8N4C8 1332 aaPredicted RBP13.31□□□□□ -0.28
LRTOMT-211ENST00000535883 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
LRTOMT-211ENST00000535883 NBPF8Q3BBV2 869 aa13.3□□□□□ -0.28
LRTOMT-211ENST00000535883 NBPF14Q5TI25 921 aa13.3□□□□□ -0.28
LRTOMT-211ENST00000535883 MPHOSPH9Q99550 1183 aa13.3□□□□□ -0.28
LRTOMT-211ENST00000535883 GPRASP1Q5JY77 1395 aa13.3□□□□□ -0.28
LRTOMT-211ENST00000535883 PDE3BQ13370 1112 aa13.29□□□□□ -0.28
LRTOMT-211ENST00000535883 POGKQ9P215 609 aa13.29□□□□□ -0.28
LRTOMT-211ENST00000535883 TRAK1Q9UPV9 953 aa13.29□□□□□ -0.28
LRTOMT-211ENST00000535883 SSH2Q76I76 1423 aa13.29□□□□□ -0.28
LRTOMT-211ENST00000535883 DLC1Q96QB1 1528 aa13.29□□□□□ -0.28
LRTOMT-211ENST00000535883 ADGRB1O14514 1584 aa13.28□□□□□ -0.28
LRTOMT-211ENST00000535883 WASLO00401 505 aaPredicted RBP13.28□□□□□ -0.28
LRTOMT-211ENST00000535883 CASZ1Q86V15 1759 aa13.27□□□□□ -0.28
LRTOMT-211ENST00000535883 ZBTB7AO95365 584 aa13.27□□□□□ -0.29
LRTOMT-211ENST00000535883 NGDNQ8NEJ9 315 aaKnown RBP13.27□□□□□ -0.29
LRTOMT-211ENST00000535883 IFFO2Q5TF58 517 aa13.26□□□□□ -0.29
LRTOMT-211ENST00000535883 NRKQ7Z2Y5 1582 aa13.26□□□□□ -0.29
LRTOMT-211ENST00000535883 TCP11L2Q8N4U5 519 aa13.26□□□□□ -0.29
LRTOMT-211ENST00000535883 TULP4Q9NRJ4 1543 aa13.26□□□□□ -0.29
LRTOMT-211ENST00000535883 PEAK1Q9H792 1746 aa13.25□□□□□ -0.29
LRTOMT-211ENST00000535883 PHRF1Q9P1Y6 1649 aaKnown RBP13.25□□□□□ -0.29
LRTOMT-211ENST00000535883 SENP3-EIF4A1A0A087X0R7 540 aa13.25□□□□□ -0.29
LRTOMT-211ENST00000535883 C1QTNF8P60827 252 aa13.25□□□□□ -0.29
LRTOMT-211ENST00000535883 ATF5Q9Y2D1 282 aaPredicted RBP13.25□□□□□ -0.29
LRTOMT-211ENST00000535883 PLSCR1O15162 318 aa13.24□□□□□ -0.29
LRTOMT-211ENST00000535883 EVA1CP58658 441 aa13.24□□□□□ -0.29
LRTOMT-211ENST00000535883 SGIP1Q9BQI5 828 aa13.24□□□□□ -0.29
LRTOMT-211ENST00000535883 SYT17Q9BSW7 474 aa13.24□□□□□ -0.29
LRTOMT-211ENST00000535883 MYOM1P52179 1685 aa13.24□□□□□ -0.29
LRTOMT-211ENST00000535883 LMO7Q8WWI1 1683 aa13.24□□□□□ -0.29
LRTOMT-211ENST00000535883 NUDT16Q96DE0 195 aaKnown RBP13.23□□□□□ -0.29
LRTOMT-211ENST00000535883 FHDC1Q9C0D6 1143 aaPredicted RBP13.23□□□□□ -0.29
LRTOMT-211ENST00000535883 ATP7BP35670 1465 aa13.23□□□□□ -0.29
LRTOMT-211ENST00000535883 SBF2Q86WG5 1849 aa13.21□□□□□ -0.29
LRTOMT-211ENST00000535883 ACEP12821 1306 aa13.2□□□□□ -0.3
LRTOMT-211ENST00000535883 DCAF8L1A6NGE4 600 aa13.2□□□□□ -0.3
LRTOMT-211ENST00000535883 MARCH10Q8NA82 808 aaPredicted RBP13.2□□□□□ -0.3
LRTOMT-211ENST00000535883 CPDO75976 1380 aa13.2□□□□□ -0.3
LRTOMT-211ENST00000535883 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
LRTOMT-211ENST00000535883 USP19O94966 1318 aa13.19□□□□□ -0.3
LRTOMT-211ENST00000535883 COL5A2P05997 1499 aaPredicted RBP13.19□□□□□ -0.3
LRTOMT-211ENST00000535883 BCL11BQ9C0K0 894 aaPredicted RBP13.19□□□□□ -0.3
LRTOMT-211ENST00000535883 THRAP3Q9Y2W1 955 aaKnown RBP13.19□□□□□ -0.3
LRTOMT-211ENST00000535883 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
LRTOMT-211ENST00000535883 GCP02774 474 aa13.18□□□□□ -0.3
LRTOMT-211ENST00000535883 CDK19Q9BWU1 502 aa13.17□□□□□ -0.3
LRTOMT-211ENST00000535883 AXIN2Q9Y2T1 843 aa13.17□□□□□ -0.3
LRTOMT-211ENST00000535883 OVOS2A0A0G2JMS6 1433 aa13.16□□□□□ -0.3
LRTOMT-211ENST00000535883 OVOS2A0A0J9YW53 1432 aa13.16□□□□□ -0.3
LRTOMT-211ENST00000535883 OVOS2Q6IE36 1432 aa13.16□□□□□ -0.3
LRTOMT-211ENST00000535883 PLEKHG3A1L390 1219 aa13.16□□□□□ -0.3
LRTOMT-211ENST00000535883 ABTB2Q8N961 1025 aa13.16□□□□□ -0.3
LRTOMT-211ENST00000535883 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
LRTOMT-211ENST00000535883 RGPD3A6NKT7 1758 aaPredicted RBP13.16□□□□□ -0.3
LRTOMT-211ENST00000535883 RGPD4Q7Z3J3 1758 aa13.16□□□□□ -0.3
LRTOMT-211ENST00000535883 EIF3AQ14152 1382 aaKnown RBP13.16□□□□□ -0.3
LRTOMT-211ENST00000535883 LRRC37A3O60309 1634 aa13.15□□□□□ -0.3
LRTOMT-211ENST00000535883 SLC15A2Q16348 729 aa13.15□□□□□ -0.3
LRTOMT-211ENST00000535883 TXNRD1Q16881 649 aa13.15□□□□□ -0.3
LRTOMT-211ENST00000535883 CRB1P82279 1406 aa13.14□□□□□ -0.31
LRTOMT-211ENST00000535883 CHD4Q14839 1912 aa13.13□□□□□ -0.31
LRTOMT-211ENST00000535883 DDB1Q16531 1140 aa13.13□□□□□ -0.31
LRTOMT-211ENST00000535883 CCDC61Q9Y6R9 512 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms